FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1536, 323 aa 1>>>pF1KE1536 323 - 323 aa - 323 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2928+/-0.000391; mu= 16.3902+/- 0.024 mean_var=74.7352+/-15.136, 0's: 0 Z-trim(112.4): 35 B-trim: 0 in 0/51 Lambda= 0.148358 statistics sampled from 21280 (21308) to 21280 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.25), width: 16 Scan time: 6.090 The best scores are: opt bits E(85289) NP_001230 (OMIM: 601953) cyclin-H isoform 1 [Homo ( 323) 2129 465.1 8.5e-131 XP_011542008 (OMIM: 601953) PREDICTED: cyclin-H is ( 325) 2047 447.6 1.6e-125 XP_005248684 (OMIM: 601953) PREDICTED: cyclin-H is ( 329) 2047 447.6 1.7e-125 NP_001186118 (OMIM: 601953) cyclin-H isoform 2 [Ho ( 270) 1762 386.5 3.3e-107 XP_016865503 (OMIM: 601953) PREDICTED: cyclin-H is ( 272) 1680 369.0 6.3e-102 XP_005248686 (OMIM: 601953) PREDICTED: cyclin-H is ( 276) 1680 369.0 6.4e-102 XP_006715657 (OMIM: 123838) PREDICTED: cyclin-C is ( 282) 164 44.5 0.00031 NP_005181 (OMIM: 123838) cyclin-C isoform a [Homo ( 283) 164 44.5 0.00031 NP_444284 (OMIM: 168461,193300,254500) G1/S-specif ( 295) 164 44.5 0.00032 XP_011535577 (OMIM: 603544) PREDICTED: cyclin-K is ( 580) 156 43.0 0.0018 NP_001092872 (OMIM: 603544) cyclin-K [Homo sapiens ( 580) 156 43.0 0.0018 XP_005268211 (OMIM: 603544) PREDICTED: cyclin-K is ( 580) 156 43.0 0.0018 XP_016866925 (OMIM: 123838) PREDICTED: cyclin-C is ( 147) 139 39.0 0.0076 XP_011534534 (OMIM: 123838) PREDICTED: cyclin-C is ( 153) 139 39.0 0.0078 >>NP_001230 (OMIM: 601953) cyclin-H isoform 1 [Homo sapi (323 aa) initn: 2129 init1: 2129 opt: 2129 Z-score: 2469.2 bits: 465.1 E(85289): 8.5e-131 Smith-Waterman score: 2129; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323) 10 20 30 40 50 60 pF1KE1 MYHNSSQKRHWTFSSEEQLARLRADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MYHNSSQKRHWTFSSEEQLARLRADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 EKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 SSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 NRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDD 250 260 270 280 290 300 310 320 pF1KE1 DYVSKKSKHEEEEWTDDDLVESL ::::::::::::::::::::::: NP_001 DYVSKKSKHEEEEWTDDDLVESL 310 320 >>XP_011542008 (OMIM: 601953) PREDICTED: cyclin-H isofor (325 aa) initn: 2047 init1: 2047 opt: 2047 Z-score: 2374.3 bits: 447.6 E(85289): 1.6e-125 Smith-Waterman score: 2047; 100.0% identity (100.0% similar) in 311 aa overlap (1-311:1-311) 10 20 30 40 50 60 pF1KE1 MYHNSSQKRHWTFSSEEQLARLRADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MYHNSSQKRHWTFSSEEQLARLRADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 EKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 SSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 NRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDD 250 260 270 280 290 300 310 320 pF1KE1 DYVSKKSKHEEEEWTDDDLVESL ::::::::::: XP_011 DYVSKKSKHEEIAKLWHQSKVHTYH 310 320 >>XP_005248684 (OMIM: 601953) PREDICTED: cyclin-H isofor (329 aa) initn: 2047 init1: 2047 opt: 2047 Z-score: 2374.2 bits: 447.6 E(85289): 1.7e-125 Smith-Waterman score: 2047; 100.0% identity (100.0% similar) in 311 aa overlap (1-311:1-311) 10 20 30 40 50 60 pF1KE1 MYHNSSQKRHWTFSSEEQLARLRADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MYHNSSQKRHWTFSSEEQLARLRADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 EKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 SSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 NRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDD 250 260 270 280 290 300 310 320 pF1KE1 DYVSKKSKHEEEEWTDDDLVESL ::::::::::: XP_005 DYVSKKSKHEEVCFTPKMNSKLFLLYILV 310 320 >>NP_001186118 (OMIM: 601953) cyclin-H isoform 2 [Homo s (270 aa) initn: 1762 init1: 1762 opt: 1762 Z-score: 2045.8 bits: 386.5 E(85289): 3.3e-107 Smith-Waterman score: 1762; 100.0% identity (100.0% similar) in 270 aa overlap (54-323:1-270) 30 40 50 60 70 80 pF1KE1 ADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTA :::::::::::::::::::::::::::::: NP_001 MTLCKYYEKRLLEFCSVFKPAMPRSVVGTA 10 20 30 90 100 110 120 130 140 pF1KE1 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQI 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE1 LEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADDFLNRIALTDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADDFLNRIALTDA 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE1 YLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYE 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE1 PPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDDDYVSKKSKHEEEEWTDDDLVESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDDDYVSKKSKHEEEEWTDDDLVESL 220 230 240 250 260 270 >>XP_016865503 (OMIM: 601953) PREDICTED: cyclin-H isofor (272 aa) initn: 1680 init1: 1680 opt: 1680 Z-score: 1950.9 bits: 369.0 E(85289): 6.3e-102 Smith-Waterman score: 1680; 100.0% identity (100.0% similar) in 258 aa overlap (54-311:1-258) 30 40 50 60 70 80 pF1KE1 ADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTA :::::::::::::::::::::::::::::: XP_016 MTLCKYYEKRLLEFCSVFKPAMPRSVVGTA 10 20 30 90 100 110 120 130 140 pF1KE1 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQI 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE1 LEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADDFLNRIALTDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADDFLNRIALTDA 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE1 YLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYE 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE1 PPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDDDYVSKKSKHEEEEWTDDDLVESL :::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDDDYVSKKSKHEEIAKLWHQSKVHT 220 230 240 250 260 270 XP_016 YH >>XP_005248686 (OMIM: 601953) PREDICTED: cyclin-H isofor (276 aa) initn: 1680 init1: 1680 opt: 1680 Z-score: 1950.8 bits: 369.0 E(85289): 6.4e-102 Smith-Waterman score: 1680; 100.0% identity (100.0% similar) in 258 aa overlap (54-311:1-258) 30 40 50 60 70 80 pF1KE1 ADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTA :::::::::::::::::::::::::::::: XP_005 MTLCKYYEKRLLEFCSVFKPAMPRSVVGTA 10 20 30 90 100 110 120 130 140 pF1KE1 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 CMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQI 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE1 LEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADDFLNRIALTDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADDFLNRIALTDA 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE1 YLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 YLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYE 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE1 PPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDDDYVSKKSKHEEEEWTDDDLVESL :::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PPRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDDDYVSKKSKHEEVCFTPKMNSKLF 220 230 240 250 260 270 XP_005 LLYILV >>XP_006715657 (OMIM: 123838) PREDICTED: cyclin-C isofor (282 aa) initn: 227 init1: 127 opt: 164 Z-score: 197.0 bits: 44.5 E(85289): 0.00031 Smith-Waterman score: 220; 27.5% identity (56.7% similar) in 247 aa overlap (44-279:28-259) 20 30 40 50 60 70 pF1KE1 SSEEQLARLRADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYYEKRLLEFCSVFKP : :: .: : .. . . . .: XP_006 MAGNFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK- 10 20 30 40 50 80 90 100 110 120 pF1KE1 AMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNV-SSPQFVG----- . ..:..:: .:::::: :. : .. ::.::: ::.::.: :. .... XP_006 -LRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSV 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 -NLRES---PLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILEN . : : : ...::: :. :.. .. :::..::::. .. :. . .: XP_006 LKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLL-- 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 PEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRT : : . : . : :: ::: : .::: : : : ..... . . : . XP_006 PLAWRIVNDTY--R---TDLCLLYPPFMIAL-ACLHVAC---VVQQKDARQ--WFAELSV 180 190 200 210 220 250 260 270 280 290 300 pF1KE1 CLSQLLDIMKSMRNLVKKYEP-PRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDDDY . ..:.:.. . .: .... . .:.:.. .:. . XP_006 DMEKILEIIRVILKLYEQWKNFDERKEMATILSKMPKPKPPPNRNSLSDSPLVAGPEAAR 230 240 250 260 270 280 310 320 pF1KE1 VSKKSKHEEEEWTDDDLVESL >>NP_005181 (OMIM: 123838) cyclin-C isoform a [Homo sapi (283 aa) initn: 247 init1: 127 opt: 164 Z-score: 197.0 bits: 44.5 E(85289): 0.00031 Smith-Waterman score: 220; 27.5% identity (56.7% similar) in 247 aa overlap (44-279:28-259) 20 30 40 50 60 70 pF1KE1 SSEEQLARLRADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYYEKRLLEFCSVFKP : :: .: : .. . . . .: NP_005 MAGNFWQSSHYLQWILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK- 10 20 30 40 50 80 90 100 110 120 pF1KE1 AMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNV-SSPQFVG----- . ..:..:: .:::::: :. : .. ::.::: ::.::.: :. .... NP_005 -LRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSV 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 -NLRES---PLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILEN . : : : ...::: :. :.. .. :::..::::. .. :. . .: NP_005 LKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLL-- 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 PEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRT : : . : . : :: ::: : .::: : : : ..... . . : . NP_005 PLAWRIVNDTY--R---TDLCLLYPPFMIAL-ACLHVAC---VVQQKDARQ--WFAELSV 180 190 200 210 220 250 260 270 280 290 300 pF1KE1 CLSQLLDIMKSMRNLVKKYEP-PRSEEVAVLKQKLERCHSAELALNVITKKRKGYEDDDY . ..:.:.. . .: .... . .:.:.. .:. . NP_005 DMEKILEIIRVILKLYEQWKNFDERKEMATILSKMPKPKPPPNSEGEQGPNGSQNSSYSQ 230 240 250 260 270 280 310 320 pF1KE1 VSKKSKHEEEEWTDDDLVESL NP_005 S >>NP_444284 (OMIM: 168461,193300,254500) G1/S-specific c (295 aa) initn: 184 init1: 77 opt: 164 Z-score: 196.7 bits: 44.5 E(85289): 0.00032 Smith-Waterman score: 177; 24.0% identity (51.2% similar) in 283 aa overlap (10-269:3-273) 10 20 30 40 50 pF1KE1 MYHNSSQKRHWTFSSE-EQLARLRADAN----RKFRCKAVANGKVLPNDPVFLEPHEEM- : . : : . : ::: : .: :. :. : ..:. NP_444 MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVL 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 -TLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLAC .. : .:: : . . : : :. :: . : . . ... :: :.: NP_444 PSMRKIVATWMLEVCE--EQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVAS 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 KVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLID :. : . . . .. . : ..:..::::...:...: . .:. .: :: NP_444 KMKETIPLTAEKLCIYTDNSIRPE----ELLQMELLLVNKLKWNLAAMTPHDFIEHFL-- 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 LKTRYP-ILENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMES-- ...: :: .:.:: :. :. : .. ::..: ... :. :....: NP_444 --SKMPEAEENKQIIRKHAQTFVALCATDVKFISNPPSMVAAGSVV--AAVQGLNLRSPN 170 180 190 200 210 220 240 250 260 270 pF1KE1 -YLSE-------SLMLKEN----RTCLSQLLDIMKS-MRNLVKKYEPPRSEEVAVLKQKL .:: : ..: . :.: :. ...: .:. ....: .:: NP_444 NFLSYYRLTRFLSRVIKCDPDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEV 230 240 250 260 270 280 280 290 300 310 320 pF1KE1 ERCHSAELALNVITKKRKGYEDDDYVSKKSKHEEEEWTDDDLVESL NP_444 DLACTPTDVRDVDI 290 >>XP_011535577 (OMIM: 603544) PREDICTED: cyclin-K isofor (580 aa) initn: 89 init1: 89 opt: 156 Z-score: 183.3 bits: 43.0 E(85289): 0.0018 Smith-Waterman score: 156; 26.3% identity (54.6% similar) in 194 aa overlap (39-223:29-216) 10 20 30 40 50 60 pF1KE1 RHWTFSSEEQLARLRADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYYEK--RLLE : : . : :: . : .: .. :.. XP_011 MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFI- 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 FCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCA-FLACKVDEFNVSSPQF : . .. ....:. .::.:::. .: .. :: . .: ::: ::.: . .. XP_011 FDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQF-PRYVTGACCLFLAGKVEETPKKCKDI 60 70 80 90 100 110 130 140 150 160 170 pF1KE1 VGNLR----ESPLGQ--EKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYP . . : . .:: . :... : .:.: ..: : :..::. . . .:: XP_011 IKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKN 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 ILENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLK ... : . : :.: : : . : ::. :.. :.: XP_011 KIQK---LVQMAWTFVNDSLCTTLSLQWEPEIIAV-AVMYLAGRLCKFEIQEWTSKPMYR 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 ENRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERCHSAELALNVITKKRKGYED XP_011 RWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQ 240 250 260 270 280 290 323 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:21:56 2016 done: Mon Nov 7 02:21:57 2016 Total Scan time: 6.090 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]