FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1557, 328 aa 1>>>pF1KE1557 328 - 328 aa - 328 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6955+/- 0.001; mu= 8.2811+/- 0.059 mean_var=107.7861+/-23.809, 0's: 0 Z-trim(106.0): 88 B-trim: 153 in 1/50 Lambda= 0.123536 statistics sampled from 8655 (8749) to 8655 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.269), width: 16 Scan time: 2.270 The best scores are: opt bits E(32554) CCDS7635.1 BUB3 gene_id:9184|Hs108|chr10 ( 328) 2260 413.8 9.2e-116 CCDS31306.1 BUB3 gene_id:9184|Hs108|chr10 ( 326) 2232 408.9 2.9e-114 CCDS13458.1 RAE1 gene_id:8480|Hs108|chr20 ( 368) 664 129.4 4.3e-30 >>CCDS7635.1 BUB3 gene_id:9184|Hs108|chr10 (328 aa) initn: 2260 init1: 2260 opt: 2260 Z-score: 2191.8 bits: 413.8 E(32554): 9.2e-116 Smith-Waterman score: 2260; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328) 10 20 30 40 50 60 pF1KE1 MTGSNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MTGSNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 DCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 KLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 QTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 SFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMYE 250 260 270 280 290 300 310 320 pF1KE1 MDDTEHPEDGIFIRQVTDAETKPKSPCT :::::::::::::::::::::::::::: CCDS76 MDDTEHPEDGIFIRQVTDAETKPKSPCT 310 320 >>CCDS31306.1 BUB3 gene_id:9184|Hs108|chr10 (326 aa) initn: 2232 init1: 2232 opt: 2232 Z-score: 2164.8 bits: 408.9 E(32554): 2.9e-114 Smith-Waterman score: 2232; 100.0% identity (100.0% similar) in 325 aa overlap (1-325:1-325) 10 20 30 40 50 60 pF1KE1 MTGSNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MTGSNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 DCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 KLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 QTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMYE 250 260 270 280 290 300 310 320 pF1KE1 MDDTEHPEDGIFIRQVTDAETKPKSPCT ::::::::::::::::::::::::: CCDS31 MDDTEHPEDGIFIRQVTDAETKPKST 310 320 >>CCDS13458.1 RAE1 gene_id:8480|Hs108|chr20 (368 aa) initn: 594 init1: 211 opt: 664 Z-score: 653.7 bits: 129.4 E(32554): 4.3e-30 Smith-Waterman score: 675; 35.2% identity (68.6% similar) in 338 aa overlap (6-325:31-366) 10 20 30 pF1KE1 MTGSNEFKLNQPPEDGISSVKFSPNT--SQFLLVS ...... :.:.:. ..::: : ..::... CCDS13 MSLFGTTSGFGTSGTSMFGSATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG 10 20 30 40 50 60 40 50 60 70 80 pF1KE1 SWDTSVRLYDVPANSMRL-KYQ--HTGAVLD-CAFYDPTHAWSGGLDHQLKMHDLNTDQE :: ..:: ..: ... . : : ::: ::: : : ....... :. :: ::...: CCDS13 SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA 70 80 90 100 110 120 90 100 110 120 130 140 pF1KE1 NLVGTHDAPIRCVEY--CPEVNVMVTGSWDQTVKLWDPRTPCNAGTFSQPEKVYTLSVSG .. ::::.. ... :. . ..:::::.:.:.:: :. ... ::. : .: CCDS13 IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY 130 140 150 160 170 180 150 160 170 180 190 200 pF1KE1 DRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQ----GYVLSSIEGRV .:.:: : ..:..:.:. .: :: ::.: ::. : .:: :..:.:::::: CCDS13 PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV 190 200 210 220 230 240 210 220 230 240 250 260 pF1KE1 AVEYLDPSPEVQKKKYAFKCHRLKENNI---EQIYPVNAISFHNIHNTFATGGSDGFVNI :..:..: :. : ...::::: . .: ..:: ::.:.:: .:.:.:: :::: .. CCDS13 AIHYINP-PNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSF 250 260 270 280 290 270 280 290 300 310 pF1KE1 WDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMY-EMDDTEHPE--DGIFIRQVT :: . .: .. :.. :...:. .: :::: . . . .:. . ::.:... CCDS13 WDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAA 300 310 320 330 340 350 320 pF1KE1 DAETKPKSPCT . : ::.. CCDS13 E-ELKPRNKK 360 328 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:23:01 2016 done: Mon Nov 7 02:23:01 2016 Total Scan time: 2.270 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]