FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1530, 446 aa 1>>>pF1KE1530 446 - 446 aa - 446 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9783+/-0.000383; mu= 19.5821+/- 0.024 mean_var=69.1907+/-13.681, 0's: 0 Z-trim(112.7): 63 B-trim: 0 in 0/54 Lambda= 0.154188 statistics sampled from 21617 (21680) to 21617 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.254), width: 16 Scan time: 6.480 The best scores are: opt bits E(85289) NP_115914 (OMIM: 615103) tubulin beta-6 chain isof ( 446) 3006 678.0 1.4e-194 NP_001290453 (OMIM: 615103) tubulin beta-6 chain i ( 446) 3006 678.0 1.4e-194 NP_006077 (OMIM: 600638,602661,614039) tubulin bet ( 450) 2810 634.4 1.9e-181 NP_006078 (OMIM: 602662) tubulin beta-4A chain iso ( 444) 2776 626.8 3.5e-179 NP_001276058 (OMIM: 602662) tubulin beta-4A chain ( 444) 2776 626.8 3.5e-179 NP_001276056 (OMIM: 602662) tubulin beta-4A chain ( 489) 2776 626.8 3.7e-179 NP_001276052 (OMIM: 602662) tubulin beta-4A chain ( 495) 2776 626.8 3.8e-179 NP_821080 (OMIM: 610031,612850) tubulin beta-2B ch ( 445) 2760 623.2 4.1e-178 NP_006079 (OMIM: 602660) tubulin beta-4B chain [Ho ( 445) 2754 621.9 1e-177 NP_001060 (OMIM: 615101,615763) tubulin beta-2A ch ( 445) 2745 619.9 4.1e-177 NP_821133 (OMIM: 156610,191130,615771) tubulin bet ( 444) 2741 619.0 7.6e-177 NP_001280141 (OMIM: 156610,191130,615771) tubulin ( 464) 2621 592.3 8.6e-169 NP_817124 (OMIM: 616768,616780) tubulin beta-8 cha ( 444) 2614 590.8 2.4e-168 NP_001290456 (OMIM: 615103) tubulin beta-6 chain i ( 374) 2520 569.8 4.2e-162 NP_001280143 (OMIM: 156610,191130,615771) tubulin ( 400) 2422 548.0 1.6e-155 NP_110400 (OMIM: 612901,613112) tubulin beta-1 cha ( 451) 2414 546.3 6.1e-155 NP_001290457 (OMIM: 615103) tubulin beta-6 chain i ( 381) 2378 538.2 1.4e-152 NP_001184110 (OMIM: 600638,602661,614039) tubulin ( 378) 2370 536.4 4.7e-152 NP_001290455 (OMIM: 615103) tubulin beta-6 chain i ( 409) 2368 536.0 6.8e-152 NP_001276059 (OMIM: 602662) tubulin beta-4A chain ( 372) 2361 534.4 1.9e-151 NP_001276060 (OMIM: 602662) tubulin beta-4A chain ( 372) 2361 534.4 1.9e-151 NP_001280145 (OMIM: 156610,191130,615771) tubulin ( 372) 2328 527.1 3e-149 NP_001280144 (OMIM: 156610,191130,615771) tubulin ( 372) 2328 527.1 3e-149 XP_016883574 (OMIM: 612901,613112) PREDICTED: tubu ( 429) 2265 513.1 5.6e-145 XP_011517761 (OMIM: 616768,616780) PREDICTED: tubu ( 372) 2229 505.1 1.3e-142 NP_001297244 (OMIM: 615101,615763) tubulin beta-2A ( 360) 2179 493.9 2.8e-139 NP_001290458 (OMIM: 615103) tubulin beta-6 chain i ( 300) 1991 452.1 9.4e-127 NP_001290459 (OMIM: 615103) tubulin beta-6 chain i ( 300) 1991 452.1 9.4e-127 XP_016871682 (OMIM: 616768,616780) PREDICTED: tubu ( 332) 1953 443.6 3.6e-124 XP_016871681 (OMIM: 616768,616780) PREDICTED: tubu ( 332) 1953 443.6 3.6e-124 XP_011517762 (OMIM: 616768,616780) PREDICTED: tubu ( 291) 1592 363.3 4.8e-100 NP_005991 (OMIM: 191110,616208) tubulin alpha-4A c ( 448) 1280 294.0 5.2e-79 NP_006073 (OMIM: 602530) tubulin alpha-1B chain [H ( 451) 1274 292.7 1.3e-78 NP_006000 (OMIM: 602529,611603) tubulin alpha-1A c ( 451) 1266 290.9 4.6e-78 NP_001257328 (OMIM: 602529,611603) tubulin alpha-1 ( 451) 1266 290.9 4.6e-78 NP_005992 (OMIM: 602528) tubulin alpha-3C/D chain ( 450) 1256 288.7 2.1e-77 NP_061816 (OMIM: 605742,613180) tubulin alpha-8 ch ( 449) 1235 284.0 5.4e-76 NP_001265481 (OMIM: 191110,616208) tubulin alpha-4 ( 433) 1228 282.5 1.5e-75 NP_001257329 (OMIM: 602529,611603) tubulin alpha-1 ( 416) 1157 266.6 8.5e-71 NP_001180343 (OMIM: 605742,613180) tubulin alpha-8 ( 383) 1091 251.9 2.1e-66 NP_001061 (OMIM: 191135,615412) tubulin gamma-1 ch ( 451) 1003 232.4 1.9e-60 NP_057521 (OMIM: 605785) tubulin gamma-2 chain iso ( 451) 994 230.4 7.5e-60 XP_016860313 (OMIM: 191110,616208) PREDICTED: tubu ( 295) 788 184.4 3.4e-46 NP_001280142 (OMIM: 156610,191130,615771) tubulin ( 242) 754 176.8 5.4e-44 NP_001290454 (OMIM: 615103) tubulin beta-6 chain i ( 104) 634 149.8 3.1e-36 NP_001307438 (OMIM: 605785) tubulin gamma-2 chain ( 460) 630 149.5 1.8e-35 XP_016879942 (OMIM: 605785) PREDICTED: tubulin gam ( 298) 526 126.2 1.2e-28 XP_011522916 (OMIM: 605785) PREDICTED: tubulin gam ( 298) 526 126.2 1.2e-28 NP_057346 (OMIM: 607345) tubulin epsilon chain [Ho ( 475) 517 124.3 6.8e-28 XP_016879943 (OMIM: 605785) PREDICTED: tubulin gam ( 274) 490 118.1 2.9e-26 >>NP_115914 (OMIM: 615103) tubulin beta-6 chain isoform (446 aa) initn: 3006 init1: 3006 opt: 3006 Z-score: 3614.4 bits: 678.0 E(85289): 1.4e-194 Smith-Waterman score: 3006; 100.0% identity (100.0% similar) in 446 aa overlap (1-446:1-446) 10 20 30 40 50 60 pF1KE1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATANDGEEAFEDEEEEIDG :::::::::::::::::::::::::: NP_115 EYQQYQDATANDGEEAFEDEEEEIDG 430 440 >>NP_001290453 (OMIM: 615103) tubulin beta-6 chain isofo (446 aa) initn: 3006 init1: 3006 opt: 3006 Z-score: 3614.4 bits: 678.0 E(85289): 1.4e-194 Smith-Waterman score: 3006; 100.0% identity (100.0% similar) in 446 aa overlap (1-446:1-446) 10 20 30 40 50 60 pF1KE1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATANDGEEAFEDEEEEIDG :::::::::::::::::::::::::: NP_001 EYQQYQDATANDGEEAFEDEEEEIDG 430 440 >>NP_006077 (OMIM: 600638,602661,614039) tubulin beta-3 (450 aa) initn: 2810 init1: 2810 opt: 2810 Z-score: 3378.8 bits: 634.4 E(85289): 1.9e-181 Smith-Waterman score: 2810; 93.0% identity (98.4% similar) in 443 aa overlap (1-443:1-443) 10 20 30 40 50 60 pF1KE1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV :::::::::::::::::.::::::::::::::.:.::::: ::::::.:::::.::.::: NP_006 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV ::: ::::::::::::::: ::.:::::::::::.:::::::::::::::::::.::::: NP_006 PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV :::::.::::::::::::::::::::::::::::.:::.::::::::::.:::::::::: NP_006 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL ::::::::.::::::::::::::::::::::::::::.:::::::::::::::::::::: NP_006 EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM ::::::::::::::::::::::::::::::::::.:::::::::::::::::::::.::: NP_006 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: NP_006 AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS :::.:::::::::::::::::::::.:::::::::::.:::::::::::::::::::::: NP_006 LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATANDGEEAFEDEEEEIDG ::::::::::.. : .::.::: NP_006 EYQQYQDATAEEEGEMYEDDEEESEAQGPK 430 440 450 >>NP_006078 (OMIM: 602662) tubulin beta-4A chain isoform (444 aa) initn: 2772 init1: 2772 opt: 2776 Z-score: 3338.0 bits: 626.8 E(85289): 3.5e-179 Smith-Waterman score: 2776; 92.3% identity (97.5% similar) in 443 aa overlap (1-443:1-441) 10 20 30 40 50 60 pF1KE1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV ::::::.::::::::::.::::::::::::::.: : ::: ::::::::::::... .:: NP_006 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV :::.:::::::::::::::::::.::::::.:::.::::::::::::::::::::::::: NP_006 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV ::: : :::::::::::::::::::::::::::::::::::::::::::.:::::::::: NP_006 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : NP_006 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: NP_006 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG ::::::::::::::.:::: :::::::::::..:::::::::::::::::.::::::::: NP_006 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS ::::.::::::::::::::::::::.:::::::::::.:::::::::::::::::::::: NP_006 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATANDGEEAFEDEEEEIDG ::::::::::..:: ::.: :: NP_006 EYQQYQDATAEEGE--FEEEAEEEVA 430 440 >>NP_001276058 (OMIM: 602662) tubulin beta-4A chain isof (444 aa) initn: 2772 init1: 2772 opt: 2776 Z-score: 3338.0 bits: 626.8 E(85289): 3.5e-179 Smith-Waterman score: 2776; 92.3% identity (97.5% similar) in 443 aa overlap (1-443:1-441) 10 20 30 40 50 60 pF1KE1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV ::::::.::::::::::.::::::::::::::.: : ::: ::::::::::::... .:: NP_001 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV :::.:::::::::::::::::::.::::::.:::.::::::::::::::::::::::::: NP_001 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV ::: : :::::::::::::::::::::::::::::::::::::::::::.:::::::::: NP_001 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : NP_001 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: NP_001 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG ::::::::::::::.:::: :::::::::::..:::::::::::::::::.::::::::: NP_001 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS ::::.::::::::::::::::::::.:::::::::::.:::::::::::::::::::::: NP_001 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATANDGEEAFEDEEEEIDG ::::::::::..:: ::.: :: NP_001 EYQQYQDATAEEGE--FEEEAEEEVA 430 440 >>NP_001276056 (OMIM: 602662) tubulin beta-4A chain isof (489 aa) initn: 2772 init1: 2772 opt: 2776 Z-score: 3337.4 bits: 626.8 E(85289): 3.7e-179 Smith-Waterman score: 2776; 92.3% identity (97.5% similar) in 443 aa overlap (1-443:46-486) 10 20 30 pF1KE1 MREIVHIQAGQCGNQIGTKFWEVISDEHGI ::::::.::::::::::.:::::::::::: NP_001 AVSAASSTLAAAAAPRARATAAASTLSATAMREIVHLQAGQCGNQIGAKFWEVISDEHGI 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE1 DPAGGYVGDSALQLERINVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNF ::.: : ::: ::::::::::::... .:::::.:::::::::::::::::::.:::::: NP_001 DPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNF 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE1 IFGQTGAGNNWAKGHYTEGAELVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTL .:::.:::::::::::::::::::::::::::: : :::::::::::::::::::::::: NP_001 VFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL 140 150 160 170 180 190 160 170 180 190 200 210 pF1KE1 LISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: NP_001 LISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 200 210 220 230 240 250 220 230 240 250 260 270 pF1KE1 CFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: NP_001 CFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 260 270 280 290 300 310 280 290 300 310 320 330 pF1KE1 APLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQM ::::::::::::::::::::::::::.:::::::::::::::::.:::: :::::::::: NP_001 APLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQM 320 330 340 350 360 370 340 350 360 370 380 390 pF1KE1 LAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFR :..:::::::::::::::::.:::::::::::::.::::::::::::::::::::.:::: NP_001 LSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFR 380 390 400 410 420 430 400 410 420 430 440 pF1KE1 RKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG :::::::.::::::::::::::::::::::::::::::::..:: ::.: :: NP_001 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEGE--FEEEAEEEVA 440 450 460 470 480 >>NP_001276052 (OMIM: 602662) tubulin beta-4A chain isof (495 aa) initn: 2772 init1: 2772 opt: 2776 Z-score: 3337.3 bits: 626.8 E(85289): 3.8e-179 Smith-Waterman score: 2776; 92.3% identity (97.5% similar) in 443 aa overlap (1-443:52-492) 10 20 30 pF1KE1 MREIVHIQAGQCGNQIGTKFWEVISDEHGI ::::::.::::::::::.:::::::::::: NP_001 AVSAASSTLAAAAAPRARATAAASTLSATAMREIVHLQAGQCGNQIGAKFWEVISDEHGI 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE1 DPAGGYVGDSALQLERINVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNF ::.: : ::: ::::::::::::... .:::::.:::::::::::::::::::.:::::: NP_001 DPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNF 90 100 110 120 130 140 100 110 120 130 140 150 pF1KE1 IFGQTGAGNNWAKGHYTEGAELVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTL .:::.:::::::::::::::::::::::::::: : :::::::::::::::::::::::: NP_001 VFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL 150 160 170 180 190 200 160 170 180 190 200 210 pF1KE1 LISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: NP_001 LISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 210 220 230 240 250 260 220 230 240 250 260 270 pF1KE1 CFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: NP_001 CFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGF 270 280 290 300 310 320 280 290 300 310 320 330 pF1KE1 APLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQM ::::::::::::::::::::::::::.:::::::::::::::::.:::: :::::::::: NP_001 APLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQM 330 340 350 360 370 380 340 350 360 370 380 390 pF1KE1 LAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFR :..:::::::::::::::::.:::::::::::::.::::::::::::::::::::.:::: NP_001 LSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFR 390 400 410 420 430 440 400 410 420 430 440 pF1KE1 RKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG :::::::.::::::::::::::::::::::::::::::::..:: ::.: :: NP_001 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEGE--FEEEAEEEVA 450 460 470 480 490 >>NP_821080 (OMIM: 610031,612850) tubulin beta-2B chain (445 aa) initn: 2740 init1: 2740 opt: 2760 Z-score: 3318.7 bits: 623.2 E(85289): 4.1e-178 Smith-Waterman score: 2760; 91.4% identity (97.3% similar) in 443 aa overlap (1-443:1-442) 10 20 30 40 50 60 pF1KE1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV :::::::::::::::::.::::::::::::::.:.: ::: ::::::::::::....::: NP_821 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV ::: :::::::::::::::::::.::::::.:::.:::::::::::::::::::.::::: NP_821 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV ::: : ::::::::::::::::::::::::::::::::.::::::::::::::::::::: NP_821 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : NP_821 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::..::: NP_821 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG ::::::::::::::..::: ::::::::::: .:.:::::::::::::::.::::::::: NP_821 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS :::..::::::::::::::::::::.:::::::::::.:::::::::::::::::::::: NP_821 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATANDGEEAFEDEEEEIDG ::::::::::.. : ::.:: : NP_821 EYQQYQDATADEQGE-FEEEEGEDEA 430 440 >>NP_006079 (OMIM: 602660) tubulin beta-4B chain [Homo s (445 aa) initn: 2776 init1: 2754 opt: 2754 Z-score: 3311.5 bits: 621.9 E(85289): 1e-177 Smith-Waterman score: 2754; 91.4% identity (97.1% similar) in 443 aa overlap (1-443:1-442) 10 20 30 40 50 60 pF1KE1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV ::::::.::::::::::.::::::::::::::.: : ::: ::::::::::::... ::: NP_006 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV :::.:::::::::::::::::::.::::::.:::.:::::::::::::::::::.::::: NP_006 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV ::: : ::::::::::::::::::::::::::::::::.::::::::::.:::::::::: NP_006 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : NP_006 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: NP_006 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG ::::::::::::::.:::: ::::::::::: .:.:::::::::::::::.::::::::: NP_006 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS :::..::::::::::::::::::::.:::::::::::.:::::::::::::::::::::: NP_006 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATANDGEEAFEDEEEEIDG ::::::::::.. : ::.: :: NP_006 EYQQYQDATAEE-EGEFEEEAEEEVA 430 440 >>NP_001060 (OMIM: 615101,615763) tubulin beta-2A chain (445 aa) initn: 2725 init1: 2725 opt: 2745 Z-score: 3300.7 bits: 619.9 E(85289): 4.1e-177 Smith-Waterman score: 2745; 91.2% identity (97.1% similar) in 443 aa overlap (1-443:1-442) 10 20 30 40 50 60 pF1KE1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV :::::::::::::::::.::::::::::::::.:.: ::: ::::::::::::....::: NP_001 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV ::: :::::::::::::::::::.::::::.:::.:::::::::::::::::::.::::: NP_001 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV ::: : ::::::::::::::::::::::::::::::::.::::::::::::::::::::: NP_001 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: : NP_001 EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::..::: NP_001 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG ::::::::::::::..::: ::::::::::: .:.:::::::::::::::.::::::::: NP_001 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS :::..::::::::::::::::::::.:::::::::::.:::::::::::::::::::::: NP_001 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 370 380 390 400 410 420 430 440 pF1KE1 EYQQYQDATANDGEEAFEDEEEEIDG ::::::::::.. : ::.:: : NP_001 EYQQYQDATADEQGE-FEEEEGEDEA 430 440 446 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:37:45 2016 done: Mon Nov 7 02:37:46 2016 Total Scan time: 6.480 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]