Result of FASTA (ccds) for pFN21AB0404
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB0404, 612 aa
  1>>>pF1KB0404 612 - 612 aa - 612 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.7915+/-0.000857; mu= 4.9991+/- 0.052
 mean_var=226.1337+/-45.780, 0's: 0 Z-trim(115.1): 34  B-trim: 147 in 1/51
 Lambda= 0.085289
 statistics sampled from 15651 (15677) to 15651 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.792), E-opt: 0.2 (0.482), width:  16
 Scan time:  4.520

The best scores are:                                      opt bits E(32554)
CCDS31844.1 OS9 gene_id:10956|Hs108|chr12          ( 612) 4147 523.1 4.1e-148
CCDS58247.1 OS9 gene_id:10956|Hs108|chr12          ( 613) 4135 521.6 1.1e-147
CCDS31843.1 OS9 gene_id:10956|Hs108|chr12          ( 667) 3606 456.6 4.8e-128
CCDS31845.1 OS9 gene_id:10956|Hs108|chr12          ( 652) 3129 397.9 2.2e-110
CCDS31846.1 OS9 gene_id:10956|Hs108|chr12          ( 597) 3123 397.1 3.4e-110
CCDS58246.1 OS9 gene_id:10956|Hs108|chr12          ( 560) 2840 362.3 9.9e-100
CCDS58248.1 OS9 gene_id:10956|Hs108|chr12          ( 580) 2829 360.9 2.6e-99
CCDS58249.1 OS9 gene_id:10956|Hs108|chr12          ( 538) 2394 307.4 3.2e-83


>>CCDS31844.1 OS9 gene_id:10956|Hs108|chr12               (612 aa)
 initn: 4147 init1: 4147 opt: 4147  Z-score: 2772.6  bits: 523.1 E(32554): 4.1e-148
Smith-Waterman score: 4147; 100.0% identity (100.0% similar) in 612 aa overlap (1-612:1-612)

               10        20        30        40        50        60
pF1KB0 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB0 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB0 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB0 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB0 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKI
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB0 VRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPG
              550       560       570       580       590       600

              610  
pF1KB0 GEGTGDLDEFDF
       ::::::::::::
CCDS31 GEGTGDLDEFDF
              610  

>>CCDS58247.1 OS9 gene_id:10956|Hs108|chr12               (613 aa)
 initn: 2342 init1: 2342 opt: 4135  Z-score: 2764.6  bits: 521.6 E(32554): 1.1e-147
Smith-Waterman score: 4135; 99.8% identity (99.8% similar) in 613 aa overlap (1-612:1-613)

               10        20        30        40        50        60
pF1KB0 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
              190       200       210       220       230       240

              250       260        270       280       290         
pF1KB0 PQAILCHPSLQPEEYMAYVQRQA-DSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
CCDS58 PQAILCHPSLQPEEYMAYVQRQAVDSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGA
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB0 SPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVI
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB0 RSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDE
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB0 DEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDG
              430       440       450       460       470       480

     480       490       500       510       520       530         
pF1KB0 LKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIK
              490       500       510       520       530       540

     540       550       560       570       580       590         
pF1KB0 IVRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IVRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSP
              550       560       570       580       590       600

     600       610  
pF1KB0 GGEGTGDLDEFDF
       :::::::::::::
CCDS58 GGEGTGDLDEFDF
              610   

>>CCDS31843.1 OS9 gene_id:10956|Hs108|chr12               (667 aa)
 initn: 4133 init1: 3606 opt: 3606  Z-score: 2412.3  bits: 456.6 E(32554): 4.8e-128
Smith-Waterman score: 3856; 91.5% identity (91.5% similar) in 644 aa overlap (1-589:1-644)

               10        20        30        40        50        60
pF1KB0 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB0 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB0 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB0 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGL
              430       440       450       460       470       480

              490       500       510       520       530          
pF1KB0 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPT-------
       :::::::::::::::::::::::::::::::::::::::::::::::::::::       
CCDS31 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTEEDPEHR
              490       500       510       520       530       540

                                                           540     
pF1KB0 ------------------------------------------------GKIEIKIVRPWA
                                                       ::::::::::::
CCDS31 VRVRVTKLRLGGPNQDLTVLEMKRENPQLKQIEGLVKELLEREGLTAAGKIEIKIVRPWA
              550       560       570       580       590       600

         550       560       570       580       590       600     
pF1KB0 EGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTG
       ::::::::::::::::::::::::::::::::::::::::::::                
CCDS31 EGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTG
              610       620       630       640       650       660

         610  
pF1KB0 DLDEFDF
              
CCDS31 DLDEFDF
              

>>CCDS31845.1 OS9 gene_id:10956|Hs108|chr12               (652 aa)
 initn: 3753 init1: 3109 opt: 3129  Z-score: 2095.3  bits: 397.9 E(32554): 2.2e-110
Smith-Waterman score: 3837; 89.4% identity (89.4% similar) in 659 aa overlap (1-604:1-644)

               10        20        30        40        50        60
pF1KB0 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB0 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB0 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB0 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGL
       :::::::::::::::::::::::::::::::::::               ::::::::::
CCDS31 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSE---------------TEKELDPDGL
              430       440       450                      460     

              490       500       510       520       530          
pF1KB0 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPT-------
       :::::::::::::::::::::::::::::::::::::::::::::::::::::       
CCDS31 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTEEDPEHR
         470       480       490       500       510       520     

                                                           540     
pF1KB0 ------------------------------------------------GKIEIKIVRPWA
                                                       ::::::::::::
CCDS31 VRVRVTKLRLGGPNQDLTVLEMKRENPQLKQIEGLVKELLEREGLTAAGKIEIKIVRPWA
         530       540       550       560       570       580     

         550       560       570       580       590       600     
pF1KB0 EGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
CCDS31 EGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPGGEGTG
         590       600       610       620       630       640     

         610  
pF1KB0 DLDEFDF
              
CCDS31 DLDEFDF
         650  

>>CCDS31846.1 OS9 gene_id:10956|Hs108|chr12               (597 aa)
 initn: 3283 init1: 3109 opt: 3123  Z-score: 2091.8  bits: 397.1 E(32554): 3.4e-110
Smith-Waterman score: 4016; 97.5% identity (97.5% similar) in 612 aa overlap (1-612:1-597)

               10        20        30        40        50        60
pF1KB0 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB0 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB0 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB0 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGL
       :::::::::::::::::::::::::::::::::::               ::::::::::
CCDS31 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSE---------------TEKELDPDGL
              430       440       450                      460     

              490       500       510       520       530       540
pF1KB0 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKI
         470       480       490       500       510       520     

              550       560       570       580       590       600
pF1KB0 VRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPG
         530       540       550       560       570       580     

              610  
pF1KB0 GEGTGDLDEFDF
       ::::::::::::
CCDS31 GEGTGDLDEFDF
         590       

>>CCDS58246.1 OS9 gene_id:10956|Hs108|chr12               (560 aa)
 initn: 2840 init1: 2840 opt: 2840  Z-score: 1904.0  bits: 362.3 E(32554): 9.9e-100
Smith-Waterman score: 3671; 91.5% identity (91.5% similar) in 612 aa overlap (1-612:1-560)

               10        20        30        40        50        60
pF1KB0 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
       :::::::::::::::::::::                                       
CCDS58 EFCYGRHIQQYHMEDSEIKGE---------------------------------------
              130       140                                        

              190       200       210       220       230       240
pF1KB0 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
                    :::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 -------------FLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
                          150       160       170       180        

              250       260       270       280       290       300
pF1KB0 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
      190       200       210       220       230       240        

              310       320       330       340       350       360
pF1KB0 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
      250       260       270       280       290       300        

              370       380       390       400       410       420
pF1KB0 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
      310       320       330       340       350       360        

              430       440       450       460       470       480
pF1KB0 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGL
      370       380       390       400       410       420        

              490       500       510       520       530       540
pF1KB0 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKI
      430       440       450       460       470       480        

              550       560       570       580       590       600
pF1KB0 VRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPG
      490       500       510       520       530       540        

              610  
pF1KB0 GEGTGDLDEFDF
       ::::::::::::
CCDS58 GEGTGDLDEFDF
      550       560

>>CCDS58248.1 OS9 gene_id:10956|Hs108|chr12               (580 aa)
 initn: 3408 init1: 2342 opt: 2829  Z-score: 1896.4  bits: 360.9 E(32554): 2.6e-99
Smith-Waterman score: 3830; 94.5% identity (94.5% similar) in 613 aa overlap (1-612:1-580)

               10        20        30        40        50        60
pF1KB0 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
       ::::::::::::::::::::::::::::::::::::::::                    
CCDS58 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAK--------------------
              130       140       150       160                    

              190       200       210       220       230       240
pF1KB0 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
                    :::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 -------------FLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
                           170       180       190       200       

              250       260        270       280       290         
pF1KB0 PQAILCHPSLQPEEYMAYVQRQA-DSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGA
       ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
CCDS58 PQAILCHPSLQPEEYMAYVQRQAVDSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGA
       210       220       230       240       250       260       

     300       310       320       330       340       350         
pF1KB0 SPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SPTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVI
       270       280       290       300       310       320       

     360       370       380       390       400       410         
pF1KB0 RSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RSPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDE
       330       340       350       360       370       380       

     420       430       440       450       460       470         
pF1KB0 DEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DEDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDG
       390       400       410       420       430       440       

     480       490       500       510       520       530         
pF1KB0 LKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LKKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIK
       450       460       470       480       490       500       

     540       550       560       570       580       590         
pF1KB0 IVRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IVRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSP
       510       520       530       540       550       560       

     600       610  
pF1KB0 GGEGTGDLDEFDF
       :::::::::::::
CCDS58 GGEGTGDLDEFDF
       570       580

>>CCDS58249.1 OS9 gene_id:10956|Hs108|chr12               (538 aa)
 initn: 2871 init1: 2378 opt: 2394  Z-score: 1607.6  bits: 307.4 E(32554): 3.2e-83
Smith-Waterman score: 3486; 87.9% identity (87.9% similar) in 612 aa overlap (1-612:1-538)

               10        20        30        40        50        60
pF1KB0 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQSQSSDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::      
CCDS58 MAAETLLSSLLGLLLLGLLLPASLTGGVGSLNLEELSEMRYGIEILPLPVMGGQ------
               10        20        30        40        50          

               70        80        90       100       110       120
pF1KB0 VIVSSKYKQRYECRLPAGAIHFQREREEETPAYQGPGIPELLSPMRDAPCLLKTKDWWTY
                                                            :::::::
CCDS58 -----------------------------------------------------TKDWWTY
                                                                60 

              130       140       150       160       170       180
pF1KB0 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EFCYGRHIQQYHMEDSEIKGEVLYLGYYQSAFDWDDETAKASKQHRLKRYHSQTYGNGSK
              70        80        90       100       110       120 

              190       200       210       220       230       240
pF1KB0 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CDLNGRPREAEVRFLCDEGAGISGDYIDRVDEPLSCSYVLTIRTPRLCPHPLLRPPPSAA
             130       140       150       160       170       180 

              250       260       270       280       290       300
pF1KB0 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PQAILCHPSLQPEEYMAYVQRQADSKQYGDKIIEELQDLGPQVWSETKSGVAPQKMAGAS
             190       200       210       220       230       240 

              310       320       330       340       350       360
pF1KB0 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PTKDDSKDSDFWKMLNEPEDQAPGGEEVPAEEQDPSPEAADSASGAPNDFQNNVQVKVIR
             250       260       270       280       290       300 

              370       380       390       400       410       420
pF1KB0 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SPADLIRFIEELKGGTKKGKPNIGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDED
             310       320       330       340       350       360 

              430       440       450       460       470       480
pF1KB0 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGL
       :::::::::::::::::::::::::::::::::::               ::::::::::
CCDS58 EDEDEDEDERQLLGEFEKELEGILLPSDRDRLRSE---------------TEKELDPDGL
             370       380       390                      400      

              490       500       510       520       530       540
pF1KB0 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KKESERDRAMLALTSTLNKLIKRLEEKQSPELVKKHKKKRVVPKKPPPSPQPTGKIEIKI
        410       420       430       440       450       460      

              550       560       570       580       590       600
pF1KB0 VRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VRPWAEGTEEGARWLTDEDTRNLKEIFFNILVPGAEEAQKERQRQKELESNYRRVWGSPG
        470       480       490       500       510       520      

              610  
pF1KB0 GEGTGDLDEFDF
       ::::::::::::
CCDS58 GEGTGDLDEFDF
        530        




612 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 03:03:50 2016 done: Mon Nov  7 03:03:50 2016
 Total Scan time:  4.520 Total Display time:  0.140

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com