(Linear) (Six-base) MAPSORT of: KIBB0404.seq Check: 3574 from: 1 to: 1836 KIBB0404.orf With 182 enzymes: SgfI * July 15, 2010 18:29 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 279 880 1836 Size: 279 601 956 Fragments arranged by size: 956 601 279 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 355 1459 1655 1664 1745 1836 Size: 355 1104 196 9 81 91 Fragments arranged by size: 1104 355 196 91 81 9 AfeI AGC'GCT Cuts at: 0 208 1836 Size: 208 1628 AlwNI CAG_nnn'CTG Cuts at: 0 1030 1296 1836 Size: 1030 266 540 Fragments arranged by size: 1030 540 266 ApaLI G'TGCA_C Cuts at: 0 1652 1836 Size: 1652 184 ApoI r'AATT_y Cuts at: 0 361 1303 1825 1836 Size: 361 942 522 11 Fragments arranged by size: 942 522 361 11 AvaI C'yCGr_G Cuts at: 0 560 1836 Size: 560 1276 BamHI G'GATC_C Cuts at: 0 290 1325 1836 Size: 290 1035 511 Fragments arranged by size: 1035 511 290 BanI G'GyrC_C Cuts at: 0 873 981 1713 1836 Size: 873 108 732 123 Fragments arranged by size: 873 732 123 108 BanII G_rGCy'C Cuts at: 0 310 638 901 1792 1836 Size: 310 328 263 891 44 Fragments arranged by size: 891 328 310 263 44 BbsI GAAGACnn'nnnn_ Cuts at: 0 343 1836 Size: 343 1493 BbvCI CC'TCA_GC Cuts at: 0 989 1836 Size: 989 847 BglII A'GATC_T Cuts at: 0 831 1694 1836 Size: 831 863 142 Fragments arranged by size: 863 831 142 Bme1580I G_kGCm'C Cuts at: 0 1656 1810 1836 Size: 1656 154 26 Fragments arranged by size: 1656 154 26 BmgBI CAC'GTC Cuts at: 0 177 1836 Size: 177 1659 BmrI ACTGGGnnnn_n' Cuts at: 0 468 704 1306 1836 Size: 468 236 602 530 Fragments arranged by size: 602 530 468 236 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 338 1369 1836 Size: 338 1031 467 Fragments arranged by size: 1031 467 338 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 118 251 1531 1778 1783 1836 Size: 118 133 1280 247 5 53 Fragments arranged by size: 1280 247 133 118 53 5 Bpu10I CC'TnA_GC Cuts at: 0 989 1836 Size: 989 847 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1672 1836 Size: 1672 164 BsaI GGTCTCn'nnnn_ Cuts at: 0 850 1340 1836 Size: 850 490 496 Fragments arranged by size: 850 496 490 BsaBI GATnn'nnATC Cuts at: 0 130 1836 Size: 130 1706 BsaHI Gr'CG_yC Cuts at: 0 375 1836 Size: 375 1461 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 115 180 274 662 685 772 835 991 Size: 115 65 94 388 23 87 63 156 Cuts at: 991 1006 1123 1261 1836 Size: 15 117 138 575 Fragments arranged by size: 575 388 156 138 117 115 94 87 65 63 23 15 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 617 701 1081 1836 Size: 617 84 380 755 Fragments arranged by size: 755 617 380 84 BsiEI CG_ry'CG Cuts at: 0 624 1836 Size: 624 1212 BsiHKAI G_wGCw'C Cuts at: 0 1038 1656 1836 Size: 1038 618 180 Fragments arranged by size: 1038 618 180 Bsp1286I G_dGCh'C Cuts at: 0 310 638 901 1038 1656 1792 1810 1836 Size: 310 328 263 137 618 136 18 26 Fragments arranged by size: 618 328 310 263 137 136 26 18 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 279 589 880 1053 1836 Size: 279 310 291 173 783 Fragments arranged by size: 783 310 291 279 173 BsrBI CCG'CTC Cuts at: 0 1383 1455 1836 Size: 1383 72 381 Fragments arranged by size: 1383 381 72 BsrDI GCAATG_nn' Cuts at: 0 534 1472 1836 Size: 534 938 364 Fragments arranged by size: 938 534 364 BsrFI r'CCGG_y Cuts at: 0 73 984 1349 1836 Size: 73 911 365 487 Fragments arranged by size: 911 487 365 73 BssSI C'ACGA_G Cuts at: 0 1677 1836 Size: 1677 159 BstBI TT'CG_AA Cuts at: 0 1077 1836 Size: 1077 759 BstXI CCAn_nnnn'nTGG Cuts at: 0 286 523 1836 Size: 286 237 1313 Fragments arranged by size: 1313 286 237 BstYI r'GATC_y Cuts at: 0 131 290 831 1325 1694 1836 Size: 131 159 541 494 369 142 Fragments arranged by size: 541 494 369 159 142 131 Bsu36I CC'TnA_GG Cuts at: 0 755 1010 1836 Size: 755 255 826 Fragments arranged by size: 826 755 255 BtgI C'CryG_G Cuts at: 0 1627 1836 Size: 1627 209 ClaI AT'CG_AT Cuts at: 0 620 1836 Size: 620 1216 DraIII CAC_nnn'GTG Cuts at: 0 712 1836 Size: 712 1124 EarI CTCTTCn'nnn_ Cuts at: 0 1238 1640 1721 1836 Size: 1238 402 81 115 Fragments arranged by size: 1238 402 115 81 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 22 1612 1836 Size: 22 1590 224 Fragments arranged by size: 1590 224 22 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 118 251 355 1459 1531 1655 1664 1745 Size: 118 133 104 1104 72 124 9 81 Cuts at: 1745 1778 1783 1836 Size: 33 5 53 Fragments arranged by size: 1104 133 124 118 104 81 72 53 33 9 5 EcoO109I rG'GnC_Cy Cuts at: 0 283 557 838 963 999 1815 1836 Size: 283 274 281 125 36 816 21 Fragments arranged by size: 816 283 281 274 125 36 21 EcoRI G'AATT_C Cuts at: 0 361 1836 Size: 361 1475 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 1713 1836 Size: 1713 123 HaeII r_GCGC'y Cuts at: 0 210 1836 Size: 210 1626 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 365 397 625 657 797 829 847 879 Size: 365 32 228 32 140 32 18 32 Cuts at: 879 1836 Size: 957 Fragments arranged by size: 957 365 228 140 32 32 32 32 18 MspA1I CmG'CkG Cuts at: 0 229 1749 1836 Size: 229 1520 87 Fragments arranged by size: 1520 229 87 NaeI GCC'GGC Cuts at: 0 986 1836 Size: 986 850 NcoI C'CATG_G Cuts at: 0 1627 1836 Size: 1627 209 NdeI CA'TA_TG Cuts at: 0 357 1836 Size: 357 1479 NgoMIV G'CCGG_C Cuts at: 0 984 1836 Size: 984 852 PflMI CCAn_nnn'nTGG Cuts at: 0 885 1836 Size: 885 951 PfoI T'CCnGG_A Cuts at: 0 1403 1836 Size: 1403 433 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 562 594 1836 Size: 562 32 1242 Fragments arranged by size: 1242 562 32 PpuMI rG'GwC_Cy Cuts at: 0 999 1815 1836 Size: 999 816 21 Fragments arranged by size: 999 816 21 PsrI GAACnnnnnnTACnnnnnnn_nnnnn' Cuts at: 0 1277 1309 1836 Size: 1277 32 527 Fragments arranged by size: 1277 527 32 PstI C_TGCA'G Cuts at: 0 1179 1836 Size: 1179 657 PvuI CG_AT'CG Cuts at: 0 624 1836 Size: 624 1212 PvuII CAG'CTG Cuts at: 0 229 1836 Size: 229 1607 SfcI C'TryA_G Cuts at: 0 748 1175 1595 1836 Size: 748 427 420 241 Fragments arranged by size: 748 427 420 241 SmaI CCC'GGG Cuts at: 0 562 1836 Size: 562 1274 SmlI C'TyrA_G Cuts at: 0 1687 1836 Size: 1687 149 StuI AGG'CCT Cuts at: 0 481 1836 Size: 481 1355 StyI C'CwwG_G Cuts at: 0 279 476 905 1627 1836 Size: 279 197 429 722 209 Fragments arranged by size: 722 429 279 209 197 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 723 1358 1836 Size: 723 635 478 Fragments arranged by size: 723 635 478 TatI w'GTAC_w Cuts at: 0 197 761 1836 Size: 197 564 1075 Fragments arranged by size: 1075 564 197 Tth111I GACn'n_nGTC Cuts at: 0 861 1836 Size: 861 975 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 867 1836 Size: 867 969 XmaI C'CCGG_G Cuts at: 0 560 1836 Size: 560 1276 Enzymes that do cut: AarI AcuI AfeI AlwNI ApaLI ApoI AvaI BamHI BanI BanII BbsI BbvCI BglII Bme1580I BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaBI BsaHI BseRI BsgI BsiEI BsiHKAI Bsp1286I BspMI BsrBI BsrDI BsrFI BssSI BstBI BstXI BstYI Bsu36I BtgI ClaI DraIII EarI EciI Eco57MI EcoO109I EcoRI FalI HaeII Hin4I MspA1I NaeI NcoI NdeI NgoMIV PflMI PfoI PpiI PpuMI PsrI PstI PvuI PvuII SfcI SmaI SmlI StuI StyI TaqII TatI Tth111I XcmI XmaI Enzymes that do not cut: AatII AccI Acc65I AclI AflII AflIII AgeI AhdI AleI AlfI AloI ApaI AscI AseI AsiSI AvrII BaeI BbeI BcgI BciVI BclI BfrBI BglI BlpI BmtI BsaAI BsaWI BsaXI BseYI BsiWI BsmI BsmBI BspEI BspHI BsrGI BssHII BstAPI BstEII BstZ17I BtgZI BtsI CspCI DraI DrdI EaeI EagI EcoICRI EcoNI EcoRV FseI FspI FspAI HincII HindIII HpaI KasI KpnI MfeI MluI MmeI MscI MslI NarI NheI NotI NruI NsiI NspI PacI PasI PciI PmeI PmlI PshAI PsiI PspOMI PspXI RsrII SacI SacII SalI SanDI SapI SbfI ScaI SexAI SfiI SfoI SgfI SgrAI SnaBI SpeI SphI SrfI SspI SwaI TstI XbaI XhoI XmnI ZraI