Result of FASTA (omim) for
pFN21AB9808
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9808, 241 aa
1>>>pF1KB9808 241 - 241 aa - 241 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5076+/-0.000342; mu= 13.2974+/- 0.021
mean_var=67.9101+/-13.355, 0's: 0 Z-trim(114.3): 37 B-trim: 0 in 0/52
Lambda= 0.155635
statistics sampled from 24017 (24054) to 24017 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.665), E-opt: 0.2 (0.282), width: 16
Scan time: 4.850
The best scores are: opt bits E(85289)
XP_006710726 (OMIM: 162030,608654) PREDICTED: beta ( 241) 1620 372.5 3.7e-103
NP_002497 (OMIM: 162030,608654) beta-nerve growth ( 241) 1620 372.5 3.7e-103
XP_011539820 (OMIM: 162030,608654) PREDICTED: beta ( 296) 1620 372.5 4.5e-103
NP_002518 (OMIM: 162660) neurotrophin-3 isoform 2 ( 257) 601 143.7 3e-34
XP_011519265 (OMIM: 162660) PREDICTED: neurotrophi ( 257) 601 143.7 3e-34
NP_001096124 (OMIM: 162660) neurotrophin-3 isoform ( 270) 601 143.7 3.1e-34
NP_001137278 (OMIM: 113505,164230,209880,607499,61 ( 247) 497 120.3 3.1e-27
NP_001700 (OMIM: 113505,164230,209880,607499,61026 ( 247) 497 120.3 3.1e-27
NP_001137288 (OMIM: 113505,164230,209880,607499,61 ( 247) 497 120.3 3.1e-27
NP_001137277 (OMIM: 113505,164230,209880,607499,61 ( 247) 497 120.3 3.1e-27
NP_733929 (OMIM: 113505,164230,209880,607499,61026 ( 247) 497 120.3 3.1e-27
NP_001137280 (OMIM: 113505,164230,209880,607499,61 ( 247) 497 120.3 3.1e-27
NP_001137285 (OMIM: 113505,164230,209880,607499,61 ( 247) 497 120.3 3.1e-27
NP_733931 (OMIM: 113505,164230,209880,607499,61026 ( 247) 497 120.3 3.1e-27
NP_001137283 (OMIM: 113505,164230,209880,607499,61 ( 247) 497 120.3 3.1e-27
NP_001137279 (OMIM: 113505,164230,209880,607499,61 ( 247) 497 120.3 3.1e-27
NP_733928 (OMIM: 113505,164230,209880,607499,61026 ( 247) 497 120.3 3.1e-27
NP_001137284 (OMIM: 113505,164230,209880,607499,61 ( 247) 497 120.3 3.1e-27
NP_001137286 (OMIM: 113505,164230,209880,607499,61 ( 247) 497 120.3 3.1e-27
NP_733927 (OMIM: 113505,164230,209880,607499,61026 ( 255) 497 120.3 3.2e-27
NP_733930 (OMIM: 113505,164230,209880,607499,61026 ( 262) 497 120.3 3.2e-27
NP_001137281 (OMIM: 113505,164230,209880,607499,61 ( 276) 497 120.3 3.4e-27
XP_011518582 (OMIM: 113505,164230,209880,607499,61 ( 329) 497 120.4 3.9e-27
NP_001137282 (OMIM: 113505,164230,209880,607499,61 ( 329) 497 120.4 3.9e-27
XP_005259019 (OMIM: 162662,613100) PREDICTED: neur ( 210) 373 92.4 6.4e-19
NP_006170 (OMIM: 162662,613100) neurotrophin-4 pre ( 210) 373 92.4 6.4e-19
XP_011525311 (OMIM: 162662,613100) PREDICTED: neur ( 210) 373 92.4 6.4e-19
XP_011525312 (OMIM: 162662,613100) PREDICTED: neur ( 210) 373 92.4 6.4e-19
XP_006723295 (OMIM: 162662,613100) PREDICTED: neur ( 210) 373 92.4 6.4e-19
XP_011525310 (OMIM: 162662,613100) PREDICTED: neur ( 220) 373 92.4 6.7e-19
>>XP_006710726 (OMIM: 162030,608654) PREDICTED: beta-ner (241 aa)
initn: 1620 init1: 1620 opt: 1620 Z-score: 1972.9 bits: 372.5 E(85289): 3.7e-103
Smith-Waterman score: 1620; 99.6% identity (100.0% similar) in 241 aa overlap (1-241:1-241)
10 20 30 40 50 60
pF1KB9 MSMLFYTLITAFLIGIQAEPHSESNVPAGHTIPQAHWTKLQHSLDTALRRARSAPAAAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSMLFYTLITAFLIGIQAEPHSESNVPAGHTIPQAHWTKLQHSLDTALRRARSAPAAAIA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ARVAGQTRNITVDPRLFKKQRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPFNRTHRSK
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
XP_006 ARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPFNRTHRSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 RSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 DPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRKAVRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRKAVRR
190 200 210 220 230 240
pF1KB9 A
:
XP_006 A
>>NP_002497 (OMIM: 162030,608654) beta-nerve growth fact (241 aa)
initn: 1620 init1: 1620 opt: 1620 Z-score: 1972.9 bits: 372.5 E(85289): 3.7e-103
Smith-Waterman score: 1620; 99.6% identity (100.0% similar) in 241 aa overlap (1-241:1-241)
10 20 30 40 50 60
pF1KB9 MSMLFYTLITAFLIGIQAEPHSESNVPAGHTIPQAHWTKLQHSLDTALRRARSAPAAAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MSMLFYTLITAFLIGIQAEPHSESNVPAGHTIPQAHWTKLQHSLDTALRRARSAPAAAIA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ARVAGQTRNITVDPRLFKKQRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPFNRTHRSK
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
NP_002 ARVAGQTRNITVDPRLFKKRRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPFNRTHRSK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 RSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 DPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRKAVRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 DPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRKAVRR
190 200 210 220 230 240
pF1KB9 A
:
NP_002 A
>>XP_011539820 (OMIM: 162030,608654) PREDICTED: beta-ner (296 aa)
initn: 1620 init1: 1620 opt: 1620 Z-score: 1971.5 bits: 372.5 E(85289): 4.5e-103
Smith-Waterman score: 1620; 99.6% identity (100.0% similar) in 241 aa overlap (1-241:56-296)
10 20 30
pF1KB9 MSMLFYTLITAFLIGIQAEPHSESNVPAGH
::::::::::::::::::::::::::::::
XP_011 GPKLSSASGPNNSFTKGAAFYPGHTEVHSVMSMLFYTLITAFLIGIQAEPHSESNVPAGH
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB9 TIPQAHWTKLQHSLDTALRRARSAPAAAIAARVAGQTRNITVDPRLFKKQRLRSPRVLFS
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
XP_011 TIPQAHWTKLQHSLDTALRRARSAPAAAIAARVAGQTRNITVDPRLFKKRRLRSPRVLFS
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB9 TQPPREAADTQDLDFEVGGAAPFNRTHRSKRSSSHPIFHRGEFSVCDSVSVWVGDKTTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TQPPREAADTQDLDFEVGGAAPFNRTHRSKRSSSHPIFHRGEFSVCDSVSVWVGDKTTAT
150 160 170 180 190 200
160 170 180 190 200 210
pF1KB9 DIKGKEVMVLGEVNINNSVFKQYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DIKGKEVMVLGEVNINNSVFKQYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKA
210 220 230 240 250 260
220 230 240
pF1KB9 LTMDGKQAAWRFIRIDTACVCVLSRKAVRRA
:::::::::::::::::::::::::::::::
XP_011 LTMDGKQAAWRFIRIDTACVCVLSRKAVRRA
270 280 290
>>NP_002518 (OMIM: 162660) neurotrophin-3 isoform 2 prep (257 aa)
initn: 464 init1: 402 opt: 601 Z-score: 735.9 bits: 143.7 E(85289): 3e-34
Smith-Waterman score: 634; 42.6% identity (67.4% similar) in 258 aa overlap (1-239:1-256)
10 20 30 40
pF1KB9 MSMLFYTLITAFLIGIQAEPHSESNVPAGHT------IPQAHWTK---------LQHSLD
::.:::... :.: :::.. .. ..: . :: : .... .
NP_002 MSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNKLSKQMVDVKENYQ
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 TALRRARSA--PAAAIAARVAGQTRNITVDPRLFKKQR-LRSPRVLFSTQPPREAADTQD
..: .:.. : . :. : : :..: .:...:: :::::.: . : :
NP_002 STLPKAEAPREPERGGPAKSAFQPV-IAMDTELLRQQRRYNSPRVLLSDSTPLEPPPLYL
70 80 90 100 110
110 120 130 140 150 160
pF1KB9 LDFEVGGAAPFNRTHRSKRSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGE
.. ::. . ::: : :: . : ::::.::::: :.:: ::..: ::.:..: ::::
NP_002 MEDYVGSPVVANRTSRRKRYAEHKS-HRGEYSVCDSESLWVTDKSSAIDIRGHQVTVLGE
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB9 VNINNSVFKQYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWR
.. .:: ::::.::.:.. :: .::::::.::::: : :..:.:.::: .. : ..::
NP_002 IKTGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWR
180 190 200 210 220 230
230 240
pF1KB9 FIRIDTACVCVLSRKAVRRA
.:::::.:::.:::: :
NP_002 WIRIDTSCVCALSRKIGRT
240 250
>>XP_011519265 (OMIM: 162660) PREDICTED: neurotrophin-3 (257 aa)
initn: 464 init1: 402 opt: 601 Z-score: 735.9 bits: 143.7 E(85289): 3e-34
Smith-Waterman score: 634; 42.6% identity (67.4% similar) in 258 aa overlap (1-239:1-256)
10 20 30 40
pF1KB9 MSMLFYTLITAFLIGIQAEPHSESNVPAGHT------IPQAHWTK---------LQHSLD
::.:::... :.: :::.. .. ..: . :: : .... .
XP_011 MSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNKLSKQMVDVKENYQ
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB9 TALRRARSA--PAAAIAARVAGQTRNITVDPRLFKKQR-LRSPRVLFSTQPPREAADTQD
..: .:.. : . :. : : :..: .:...:: :::::.: . : :
XP_011 STLPKAEAPREPERGGPAKSAFQPV-IAMDTELLRQQRRYNSPRVLLSDSTPLEPPPLYL
70 80 90 100 110
110 120 130 140 150 160
pF1KB9 LDFEVGGAAPFNRTHRSKRSSSHPIFHRGEFSVCDSVSVWVGDKTTATDIKGKEVMVLGE
.. ::. . ::: : :: . : ::::.::::: :.:: ::..: ::.:..: ::::
XP_011 MEDYVGSPVVANRTSRRKRYAEHKS-HRGEYSVCDSESLWVTDKSSAIDIRGHQVTVLGE
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB9 VNINNSVFKQYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDG-KQAAWR
.. .:: ::::.::.:.. :: .::::::.::::: : :..:.:.::: .. : ..::
XP_011 IKTGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWR
180 190 200 210 220 230
230 240
pF1KB9 FIRIDTACVCVLSRKAVRRA
.:::::.:::.:::: :
XP_011 WIRIDTSCVCALSRKIGRT
240 250
>>NP_001096124 (OMIM: 162660) neurotrophin-3 isoform 1 p (270 aa)
initn: 464 init1: 402 opt: 601 Z-score: 735.6 bits: 143.7 E(85289): 3.1e-34
Smith-Waterman score: 634; 42.6% identity (67.4% similar) in 258 aa overlap (1-239:14-269)
10 20 30
pF1KB9 MSMLFYTLITAFLIGIQAEPHSESNVPAGHT------IPQAHWTK--
::.:::... :.: :::.. .. ..: . :: :
NP_001 MVTFATILQVNKVMSILFYVIFLAYLRGIQGNNMDQRSLPEDSLNSLIIKLIQADILKNK
10 20 30 40 50 60
40 50 60 70 80
pF1KB9 -------LQHSLDTALRRARSA--PAAAIAARVAGQTRNITVDPRLFKKQR-LRSPRVLF
.... ...: .:.. : . :. : : :..: .:...:: :::::.
NP_001 LSKQMVDVKENYQSTLPKAEAPREPERGGPAKSAFQPV-IAMDTELLRQQRRYNSPRVLL
70 80 90 100 110
90 100 110 120 130 140
pF1KB9 STQPPREAADTQDLDFEVGGAAPFNRTHRSKRSSSHPIFHRGEFSVCDSVSVWVGDKTTA
: . : : .. ::. . ::: : :: . : ::::.::::: :.:: ::..:
NP_001 SDSTPLEPPPLYLMEDYVGSPVVANRTSRRKRYAEHKS-HRGEYSVCDSESLWVTDKSSA
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB9 TDIKGKEVMVLGEVNINNSVFKQYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVK
::.:..: ::::.. .:: ::::.::.:.. :: .::::::.::::: : :..:.:.
NP_001 IDIRGHQVTVLGEIKTGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVR
180 190 200 210 220 230
210 220 230 240
pF1KB9 ALTMDG-KQAAWRFIRIDTACVCVLSRKAVRRA
::: .. : ..::.:::::.:::.:::: :
NP_001 ALTSENNKLVGWRWIRIDTSCVCALSRKIGRT
240 250 260 270
>>NP_001137278 (OMIM: 113505,164230,209880,607499,610269 (247 aa)
initn: 435 init1: 272 opt: 497 Z-score: 610.0 bits: 120.3 E(85289): 3.1e-27
Smith-Waterman score: 497; 36.1% identity (63.5% similar) in 249 aa overlap (1-239:1-247)
10 20 30 40 50
pF1KB9 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA
:..:: :.. ... ..: : .:.:. .: . : .. .:.. .:. . :
NP_001 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 -----IAARVAGQTRNITVDPRLFKKQRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF
. .. . ... . . : : . ::..:.: : : :. .
NP_001 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK
: . : .: :. : .:::.:::::.: :: .:: ::.:..: : :: .: .... .:
NP_001 NMSMRVRRHSD-PA-RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK
130 140 150 160 170
180 190 200 210 220 230
pF1KB9 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQ-AAWRFIRIDTACV
:::.:::: . . ::::::..:::: : ::...:.:::::.:. .::::::::.::
NP_001 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV
180 190 200 210 220 230
240
pF1KB9 CVLSRKAVRRA
:.:. : :
NP_001 CTLTIKRGR
240
>>NP_001700 (OMIM: 113505,164230,209880,607499,610269) b (247 aa)
initn: 435 init1: 272 opt: 497 Z-score: 610.0 bits: 120.3 E(85289): 3.1e-27
Smith-Waterman score: 497; 36.1% identity (63.5% similar) in 249 aa overlap (1-239:1-247)
10 20 30 40 50
pF1KB9 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA
:..:: :.. ... ..: : .:.:. .: . : .. .:.. .:. . :
NP_001 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 -----IAARVAGQTRNITVDPRLFKKQRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF
. .. . ... . . : : . ::..:.: : : :. .
NP_001 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK
: . : .: :. : .:::.:::::.: :: .:: ::.:..: : :: .: .... .:
NP_001 NMSMRVRRHSD-PA-RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK
130 140 150 160 170
180 190 200 210 220 230
pF1KB9 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQ-AAWRFIRIDTACV
:::.:::: . . ::::::..:::: : ::...:.:::::.:. .::::::::.::
NP_001 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV
180 190 200 210 220 230
240
pF1KB9 CVLSRKAVRRA
:.:. : :
NP_001 CTLTIKRGR
240
>>NP_001137288 (OMIM: 113505,164230,209880,607499,610269 (247 aa)
initn: 435 init1: 272 opt: 497 Z-score: 610.0 bits: 120.3 E(85289): 3.1e-27
Smith-Waterman score: 497; 36.1% identity (63.5% similar) in 249 aa overlap (1-239:1-247)
10 20 30 40 50
pF1KB9 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA
:..:: :.. ... ..: : .:.:. .: . : .. .:.. .:. . :
NP_001 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 -----IAARVAGQTRNITVDPRLFKKQRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF
. .. . ... . . : : . ::..:.: : : :. .
NP_001 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK
: . : .: :. : .:::.:::::.: :: .:: ::.:..: : :: .: .... .:
NP_001 NMSMRVRRHSD-PA-RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK
130 140 150 160 170
180 190 200 210 220 230
pF1KB9 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQ-AAWRFIRIDTACV
:::.:::: . . ::::::..:::: : ::...:.:::::.:. .::::::::.::
NP_001 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV
180 190 200 210 220 230
240
pF1KB9 CVLSRKAVRRA
:.:. : :
NP_001 CTLTIKRGR
240
>>NP_001137277 (OMIM: 113505,164230,209880,607499,610269 (247 aa)
initn: 435 init1: 272 opt: 497 Z-score: 610.0 bits: 120.3 E(85289): 3.1e-27
Smith-Waterman score: 497; 36.1% identity (63.5% similar) in 249 aa overlap (1-239:1-247)
10 20 30 40 50
pF1KB9 MSMLFYTLITAFLIGIQAEPHSESNV--PAGHTIPQAHWTKLQHSLDTALRRARSAPAAA
:..:: :.. ... ..: : .:.:. .: . : .. .:.. .:. . :
NP_001 MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 -----IAARVAGQTRNITVDPRLFKKQRLRSPRVLFSTQPPREAADTQDLDFEVGGAAPF
. .. . ... . . : : . ::..:.: : : :. .
NP_001 DTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 NRTHRSKRSSSHPIFHRGEFSVCDSVSVWV--GDKTTATDIKGKEVMVLGEVNINNSVFK
: . : .: :. : .:::.:::::.: :: .:: ::.:..: : :: .: .... .:
NP_001 NMSMRVRRHSD-PA-RRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK
130 140 150 160 170
180 190 200 210 220 230
pF1KB9 QYFFETKCRDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQ-AAWRFIRIDTACV
:::.:::: . . ::::::..:::: : ::...:.:::::.:. .::::::::.::
NP_001 QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV
180 190 200 210 220 230
240
pF1KB9 CVLSRKAVRRA
:.:. : :
NP_001 CTLTIKRGR
240
241 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:00:40 2016 done: Sat Nov 5 02:00:41 2016
Total Scan time: 4.850 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]