Result of FASTA (omim) for
pFN21AE3123
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3123, 310 aa
1>>>pF1KE3123 310 - 310 aa - 310 aa
Library: /omim/omim.rfq.tfa
64369986 residues in 92320 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3956+/-0.000326; mu= 15.8301+/- 0.020
mean_var=73.4751+/-14.645, 0's: 0 Z-trim(115.6): 86 B-trim: 35 in 1/50
Lambda= 0.149625
statistics sampled from 27132 (27220) to 27132 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.295), width: 16
Scan time: 3.600
The best scores are: opt bits E(92320)
NP_005796 (OMIM: 607173) 26S proteasome non-ATPase ( 310) 2053 452.2 6.6e-127
NP_006828 (OMIM: 604850) COP9 signalosome complex ( 334) 474 111.4 2.8e-24
NP_003747 (OMIM: 603912) eukaryotic translation in ( 352) 225 57.7 4.4e-08
XP_011538876 (OMIM: 612176,618116) histone H2A deu ( 739) 186 49.4 2.8e-05
XP_011538875 (OMIM: 612176,618116) histone H2A deu ( 761) 186 49.4 2.8e-05
XP_006710377 (OMIM: 612176,618116) histone H2A deu ( 827) 186 49.5 3e-05
NP_001078956 (OMIM: 612176,618116) histone H2A deu ( 828) 186 49.5 3e-05
NP_077308 (OMIM: 300617) lys-63-specific deubiquit ( 316) 174 46.6 8.4e-05
XP_005274808 (OMIM: 300617) lys-63-specific deubiq ( 317) 174 46.6 8.4e-05
NP_001018065 (OMIM: 300617) lys-63-specific deubiq ( 291) 162 44.0 0.00047
XP_016885327 (OMIM: 300617) lys-63-specific deubiq ( 291) 162 44.0 0.00047
NP_001229569 (OMIM: 300617) lys-63-specific deubiq ( 292) 162 44.0 0.00047
XP_016871947 (OMIM: 612352) AMSH-like protease iso ( 330) 157 43.0 0.0011
XP_006717993 (OMIM: 612352) AMSH-like protease iso ( 436) 157 43.0 0.0014
XP_011538287 (OMIM: 612352) AMSH-like protease iso ( 436) 157 43.0 0.0014
XP_016871945 (OMIM: 612352) AMSH-like protease iso ( 436) 157 43.0 0.0014
XP_016871942 (OMIM: 612352) AMSH-like protease iso ( 436) 157 43.0 0.0014
XP_006717991 (OMIM: 612352) AMSH-like protease iso ( 436) 157 43.0 0.0014
NP_065850 (OMIM: 612352) AMSH-like protease [Homo ( 436) 157 43.0 0.0014
XP_011538285 (OMIM: 612352) AMSH-like protease iso ( 436) 157 43.0 0.0014
XP_016871944 (OMIM: 612352) AMSH-like protease iso ( 436) 157 43.0 0.0014
NP_002802 (OMIM: 157970) 26S proteasome non-ATPase ( 324) 151 41.7 0.0027
>>NP_005796 (OMIM: 607173) 26S proteasome non-ATPase reg (310 aa)
initn: 2053 init1: 2053 opt: 2053 Z-score: 2400.0 bits: 452.2 E(92320): 6.6e-127
Smith-Waterman score: 2053; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310)
10 20 30 40 50 60
pF1KE3 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 NESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCL
250 260 270 280 290 300
310
pF1KE3 AAMLDTVVFK
::::::::::
NP_005 AAMLDTVVFK
310
>>NP_006828 (OMIM: 604850) COP9 signalosome complex subu (334 aa)
initn: 414 init1: 236 opt: 474 Z-score: 557.5 bits: 111.4 E(92320): 2.8e-24
Smith-Waterman score: 474; 35.7% identity (65.9% similar) in 252 aa overlap (33-271:57-301)
10 20 30 40 50 60
pF1KE3 RLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFV
::.::::::. :.:.: .::::::::. :
NP_006 EIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGK-V
30 40 50 60 70 80
70 80 90 100 110 120
pF1KE3 DDYTVRVIDVFAMPQSGTGVSVEAVDPVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGC
: :. ..: ::.: :: . :.: ... : ... ::.:: : ..::::::::.::
NP_006 DGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGC
90 100 110 120 130 140
130 140 150 160 170
pF1KE3 WLSGVDINTQQSFEALSERAVAVVVDPIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTS
::::.:..::. . ..: ::::.:: .... ::: . ::: .. . : . :
NP_006 WLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFRTYPKGY----KPPDEGPS
150 160 170 180 190 200
180 190 200 210 220 230
pF1KE3 NLGHLNKPSIQAL-IHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGL------TLQ
. . .:. . .: ..::.. ..: :. :..:.: : .: :.. : :
NP_006 EYQTIPLNKIEDFGVH--CKQYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNA
210 220 230 240 250
240 250 260 270 280
pF1KE3 DYS--EHCKHNESVVKEMLELAK-NYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVD
::. . .:.. . .:.. .. ..: .:. . ..::
NP_006 DYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDSCKTTIEAIHGLM
260 270 280 290 300 310
290 300 310
pF1KE3 VLMTSNIVQCLAAMLDTVVFK
NP_006 SQVIKDKLFNQINIS
320 330
>>NP_003747 (OMIM: 603912) eukaryotic translation initia (352 aa)
initn: 122 init1: 74 opt: 225 Z-score: 266.6 bits: 57.7 E(92320): 4.4e-08
Smith-Waterman score: 244; 24.8% identity (59.6% similar) in 282 aa overlap (8-283:20-275)
10 20 30 40
pF1KE3 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRA-
:.. : :.: :. :: .:: :..:..::..:: .
NP_003 MASRKEGTGSTATSSSSTAGAAGKGKGKGGSGDS-AV---KQVQIDGLVVLKIIKHYQEE
10 20 30 40 50
50 60 70 80 90 100
pF1KE3 GVPMEVM-GLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPE
: ::. :..:: :.: ... . : .:: : ... . .: .:. :.... .
NP_003 GQGTEVVQGVLLGLVVEDR-LEITNCFPFPQH-TEDDADFDEVQYQMEMMRSLRHVNIDH
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE3 MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINAN
. ::::.: .: ... . ...: :.. :..:... :::....:.. . :.::
NP_003 LHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE3 MMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWM
: : .. . . :.: .: .. . . : ....: . .. .:.:::
NP_003 MEVCKEKDFSPEA----LKKANIT-----FEYMFEEVPIVIKNSHLINVLMWELEKKS--
180 190 200 210 220
230 240 250 260 270 280
pF1KE3 EGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLA----IKNVGKQDPKR
.. : ::. . .:.:: . ... :.:. . . ..:..::. ..
NP_003 ---AVAD-----KHELLSLASSNHLGKNLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQK
230 240 250 260 270
290 300 310
pF1KE3 HLEEHVDVLMTSNIVQCLAAMLDTVVFK
:
NP_003 HQYQQRRQQENMQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYCQNIKEFT
280 290 300 310 320 330
>>XP_011538876 (OMIM: 612176,618116) histone H2A deubiqu (739 aa)
initn: 107 init1: 107 opt: 186 Z-score: 216.5 bits: 49.4 E(92320): 2.8e-05
Smith-Waterman score: 186; 34.1% identity (63.4% similar) in 123 aa overlap (30-147:487-605)
10 20 30 40 50
pF1KE3 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
:: ..: ::: : :..... ::.::. :
XP_011 LKVPRPTKSSFDPFQLIPCNFFSEEKQEPFQVKVASEALLIMDLHAHVSMA-EVIGLLGG
460 470 480 490 500 510
60 70 80 90 100 110
pF1KE3 EFVD-DYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGF
.. . : .:.: . . .::.. : .::: :.. . : : :.:::::::.:
XP_011 RYSEVDKVVEVCAAEPCNSLSTGLQCE-MDPVSQTQASETLAVRGFS--VIGWYHSHPAF
520 530 540 550 560 570
120 130 140 150 160 170
pF1KE3 GCWLSGVDINTQQSFEALSERA----VAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEP
: ::.:: .... :. ....:.:
XP_011 DPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRNNPLPYSQITCLVISEEISPDGSY
580 590 600 610 620 630
180 190 200 210 220 230
pF1KE3 RQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDY
XP_011 RLPYKFEVQQMLEEPQWGLVFEKTRWIIEKYRLSHSSVPMDKIFRRDSDLTCLQKLLECM
640 650 660 670 680 690
>>XP_011538875 (OMIM: 612176,618116) histone H2A deubiqu (761 aa)
initn: 107 init1: 107 opt: 186 Z-score: 216.3 bits: 49.4 E(92320): 2.8e-05
Smith-Waterman score: 186; 34.1% identity (63.4% similar) in 123 aa overlap (30-147:509-627)
10 20 30 40 50
pF1KE3 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
:: ..: ::: : :..... ::.::. :
XP_011 LKVPRPTKSSFDPFQLIPCNFFSEEKQEPFQVKVASEALLIMDLHAHVSMA-EVIGLLGG
480 490 500 510 520 530
60 70 80 90 100 110
pF1KE3 EFVD-DYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGF
.. . : .:.: . . .::.. : .::: :.. . : : :.:::::::.:
XP_011 RYSEVDKVVEVCAAEPCNSLSTGLQCE-MDPVSQTQASETLAVRGFS--VIGWYHSHPAF
540 550 560 570 580 590
120 130 140 150 160 170
pF1KE3 GCWLSGVDINTQQSFEALSERA----VAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEP
: ::.:: .... :. ....:.:
XP_011 DPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRNNPLPYSQITCLVISEEISPDGSY
600 610 620 630 640 650
180 190 200 210 220 230
pF1KE3 RQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDY
XP_011 RLPYKFEVQQMLEEPQWGLVFEKTRWIIEKYRLSHSSVPMDKIFRRDSDLTCLQKLLECM
660 670 680 690 700 710
>>XP_006710377 (OMIM: 612176,618116) histone H2A deubiqu (827 aa)
initn: 92 init1: 92 opt: 186 Z-score: 215.8 bits: 49.5 E(92320): 3e-05
Smith-Waterman score: 186; 34.1% identity (63.4% similar) in 123 aa overlap (30-147:576-694)
10 20 30 40 50
pF1KE3 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
:: ..: ::: : :..... ::.::. :
XP_006 LKVPRPTKSSFDPFQLIPCNFFSEEKQEPFQVKVASEALLIMDLHAHVSMA-EVIGLLGG
550 560 570 580 590 600
60 70 80 90 100 110
pF1KE3 EFVD-DYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGF
.. . : .:.: . . .::.. : .::: :.. . : : :.:::::::.:
XP_006 RYSEVDKVVEVCAAEPCNSLSTGLQCE-MDPVSQTQASETLAVRGFS--VIGWYHSHPAF
610 620 630 640 650 660
120 130 140 150 160 170
pF1KE3 GCWLSGVDINTQQSFEALSERA----VAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEP
: ::.:: .... :. ....:.:
XP_006 DPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRNNPLPYSQITCLVISEEISPDGSY
670 680 690 700 710 720
180 190 200 210 220 230
pF1KE3 RQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDY
XP_006 RLPYKFEVQQMLEEPQWGLVFEKTRWIIEKYRLSHSVPMDKIFRRDSDLTCLQKLLECMR
730 740 750 760 770 780
>>NP_001078956 (OMIM: 612176,618116) histone H2A deubiqu (828 aa)
initn: 107 init1: 107 opt: 186 Z-score: 215.8 bits: 49.5 E(92320): 3e-05
Smith-Waterman score: 186; 34.1% identity (63.4% similar) in 123 aa overlap (30-147:576-694)
10 20 30 40 50
pF1KE3 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
:: ..: ::: : :..... ::.::. :
NP_001 LKVPRPTKSSFDPFQLIPCNFFSEEKQEPFQVKVASEALLIMDLHAHVSMA-EVIGLLGG
550 560 570 580 590 600
60 70 80 90 100 110
pF1KE3 EFVD-DYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGF
.. . : .:.: . . .::.. : .::: :.. . : : :.:::::::.:
NP_001 RYSEVDKVVEVCAAEPCNSLSTGLQCE-MDPVSQTQASETLAVRGFS--VIGWYHSHPAF
610 620 630 640 650 660
120 130 140 150 160 170
pF1KE3 GCWLSGVDINTQQSFEALSERA----VAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEP
: ::.:: .... :. ....:.:
NP_001 DPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPYNRNNPLPYSQITCLVISEEISPDGSY
670 680 690 700 710 720
180 190 200 210 220 230
pF1KE3 RQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDY
NP_001 RLPYKFEVQQMLEEPQWGLVFEKTRWIIEKYRLSHSSVPMDKIFRRDSDLTCLQKLLECM
730 740 750 760 770 780
>>NP_077308 (OMIM: 300617) lys-63-specific deubiquitinas (316 aa)
initn: 191 init1: 146 opt: 174 Z-score: 207.8 bits: 46.6 E(92320): 8.4e-05
Smith-Waterman score: 197; 27.3% identity (53.6% similar) in 194 aa overlap (25-185:6-199)
10 20 30 40 50 60
pF1KE3 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
:.... :.. : :.: :.:. . ::::: .::
NP_077 MAVQVVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGE
10 20 30 40
70 80 90
pF1KE3 FVDD--------YT-------------VRVI---DVFAMPQSGTGVSVEAVDP----VFQ
. :: :: ::.. .:. . .: . ..: . .
NP_077 LNDDTRSDSKFAYTGTEMRTVAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAAS
50 60 70 80 90 100
100 110 120 130 140
pF1KE3 AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPI
.. . . :::: ::::::::: . : : ::. :: .. ... :... ..
NP_077 TEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDK
110 120 130 140 150 160
150 160 170 180 190 200
pF1KE3 QSVKGKVVIDAFRLINANMMVLG-HEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINY
.. :.:. :. :.:. . : ::. :. :..
NP_077 NTKTGRVLYTCFQSIQAQKSSESLHGPRDFWSSSQHISIEGQKEEERYERIEIPIHIVPH
170 180 190 200 210 220
210 220 230 240 250 260
pF1KE3 RKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTP
NP_077 VTIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDSVTKIHNGSVFTKNLCSQMSAVSG
230 240 250 260 270 280
>>XP_005274808 (OMIM: 300617) lys-63-specific deubiquiti (317 aa)
initn: 191 init1: 146 opt: 174 Z-score: 207.8 bits: 46.6 E(92320): 8.4e-05
Smith-Waterman score: 198; 27.6% identity (52.0% similar) in 196 aa overlap (25-185:6-200)
10 20 30 40 50 60
pF1KE3 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
:.... :.. : :.: :.:. . ::::: .::
XP_005 MAVQVVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGE
10 20 30 40
70 80 90
pF1KE3 FVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDML---------------------
. :: : : . ::. . . .: :: : ... ...
XP_005 LNDD-TSRSDSKFAYTGTEMRTVAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSA
50 60 70 80 90 100
100 110 120 130 140
pF1KE3 ---------KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VD
. :::: ::::::::: . : : ::. :: .. ... :... ..
XP_005 ASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIE
110 120 130 140 150 160
150 160 170 180 190 200
pF1KE3 PIQSVKGKVVIDAFRLINANMMVLG-HEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITI
.. :.:. :. :.:. . : ::. :. :..
XP_005 DKNTKTGRVLYTCFQSIQAQKSSESLHGPRDFWSSSQHISIEGQKEEERYERIEIPIHIV
170 180 190 200 210 220
210 220 230 240 250 260
pF1KE3 NYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKM
XP_005 PHVTIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDSVTKIHNGSVFTKNLCSQMSAV
230 240 250 260 270 280
>>NP_001018065 (OMIM: 300617) lys-63-specific deubiquiti (291 aa)
initn: 191 init1: 146 opt: 162 Z-score: 194.3 bits: 44.0 E(92320): 0.00047
Smith-Waterman score: 185; 27.7% identity (53.8% similar) in 173 aa overlap (25-165:6-178)
10 20 30 40 50 60
pF1KE3 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
:.... :.. : :.: :.:. . ::::: .::
NP_001 MAVQVVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGE
10 20 30 40
70 80 90
pF1KE3 FVDD--------YT-------------VRVI---DVFAMPQSGTGVSVEAVDP----VFQ
. :: :: ::.. .:. . .: . ..: . .
NP_001 LNDDTRSDSKFAYTGTEMRTVAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAAS
50 60 70 80 90 100
100 110 120 130 140
pF1KE3 AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV----VDPI
.. . . :::: ::::::::: . : : ::. :: .. ... :... ..
NP_001 TEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDK
110 120 130 140 150 160
150 160 170 180 190 200
pF1KE3 QSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYR
.. :.:. :. :.:
NP_001 NTKTGRVLYTCFQSIQAQKSSEYERIEIPIHIVPHVTIGKVCLESAVELPKILCQEEQDA
170 180 190 200 210 220
310 residues in 1 query sequences
64369986 residues in 92320 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Oct 24 21:58:38 2019 done: Thu Oct 24 21:58:38 2019
Total Scan time: 3.600 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]