Result of FASTA (omim) for pFN21AA0898
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0898, 964 aa
  1>>>pF1KA0898 964 - 964 aa - 964 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.6840+/-0.000414; mu= 11.4412+/- 0.026
 mean_var=176.7413+/-36.441, 0's: 0 Z-trim(117.3): 154  B-trim: 0 in 0/55
 Lambda= 0.096473
 statistics sampled from 29066 (29269) to 29066 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.689), E-opt: 0.2 (0.343), width:  16
 Scan time: 11.410

The best scores are:                                      opt bits E(85289)
NP_001005207 (OMIM: 253250,605073) E3 ubiquitin-pr ( 964) 6419 906.7       0
NP_056109 (OMIM: 253250,605073) E3 ubiquitin-prote ( 964) 6419 906.7       0
XP_016880152 (OMIM: 253250,605073) PREDICTED: E3 u ( 986) 6419 906.7       0
XP_011523134 (OMIM: 253250,605073) PREDICTED: E3 u ( 989) 6419 906.7       0
NP_001307916 (OMIM: 253250,605073) E3 ubiquitin-pr ( 930) 6117 864.6       0
XP_016880154 (OMIM: 253250,605073) PREDICTED: E3 u ( 955) 6117 864.6       0
XP_005257442 (OMIM: 253250,605073) PREDICTED: E3 u ( 973) 5964 843.3       0
XP_016880151 (OMIM: 253250,605073) PREDICTED: E3 u ( 995) 5964 843.3       0
XP_011523133 (OMIM: 253250,605073) PREDICTED: E3 u ( 998) 5964 843.3       0
NP_001307918 (OMIM: 253250,605073) E3 ubiquitin-pr ( 925) 5961 842.9       0
NP_001307917 (OMIM: 253250,605073) E3 ubiquitin-pr ( 925) 5961 842.9       0
XP_011523138 (OMIM: 253250,605073) PREDICTED: E3 u ( 950) 5961 842.9       0
XP_016880157 (OMIM: 253250,605073) PREDICTED: E3 u ( 939) 5662 801.3       0
XP_011523136 (OMIM: 253250,605073) PREDICTED: E3 u ( 964) 5662 801.3       0
XP_016880159 (OMIM: 253250,605073) PREDICTED: E3 u ( 891) 5659 800.9       0
XP_016880160 (OMIM: 253250,605073) PREDICTED: E3 u ( 810) 5282 748.3 3.5e-215
NP_001307919 (OMIM: 253250,605073) E3 ubiquitin-pr ( 803) 5035 714.0 7.8e-205
XP_016880161 (OMIM: 253250,605073) PREDICTED: E3 u ( 771) 4824 684.6 5.3e-196
XP_016880163 (OMIM: 253250,605073) PREDICTED: E3 u ( 719) 4743 673.3 1.2e-192
XP_016880155 (OMIM: 253250,605073) PREDICTED: E3 u ( 947) 4486 637.6 8.9e-182
XP_016880156 (OMIM: 253250,605073) PREDICTED: E3 u ( 947) 4486 637.6 8.9e-182
XP_016880158 (OMIM: 253250,605073) PREDICTED: E3 u ( 913) 4467 635.0 5.4e-181
XP_016880162 (OMIM: 253250,605073) PREDICTED: E3 u ( 753) 4288 610.0 1.5e-173
XP_016880153 (OMIM: 253250,605073) PREDICTED: E3 u ( 956) 4031 574.3  1e-162
XP_011523135 (OMIM: 253250,605073) PREDICTED: E3 u ( 981) 4031 574.3 1.1e-162
NP_742013 (OMIM: 605700) E3 ubiquitin-protein liga ( 488)  263 49.6 4.7e-05
NP_067076 (OMIM: 605700) E3 ubiquitin-protein liga ( 518)  263 49.6 4.9e-05
NP_060543 (OMIM: 613184) E3 ubiquitin-protein liga ( 485)  240 46.4 0.00043
NP_001186502 (OMIM: 606559) E3 ubiquitin-protein l ( 494)  234 45.6 0.00077
NP_006065 (OMIM: 606559) E3 ubiquitin-protein liga ( 498)  232 45.3 0.00094
XP_006718421 (OMIM: 608487) PREDICTED: tripartite  ( 265)  223 43.8  0.0014
XP_016873952 (OMIM: 608487) PREDICTED: tripartite  ( 265)  223 43.8  0.0014
XP_011518729 (OMIM: 608487) PREDICTED: tripartite  ( 271)  223 43.8  0.0014
XP_016873951 (OMIM: 608487) PREDICTED: tripartite  ( 300)  223 43.9  0.0015
XP_011518728 (OMIM: 608487) PREDICTED: tripartite  ( 310)  223 43.9  0.0016
XP_016873950 (OMIM: 608487) PREDICTED: tripartite  ( 310)  223 43.9  0.0016
XP_016873949 (OMIM: 608487) PREDICTED: tripartite  ( 314)  223 43.9  0.0016
NP_149084 (OMIM: 608487) tripartite motif-containi ( 326)  223 43.9  0.0016
XP_005253241 (OMIM: 608487) PREDICTED: tripartite  ( 326)  223 43.9  0.0016
NP_149083 (OMIM: 608487) tripartite motif-containi ( 347)  223 43.9  0.0017
NP_149023 (OMIM: 608487) tripartite motif-containi ( 493)  223 44.0  0.0022
XP_005253240 (OMIM: 608487) PREDICTED: tripartite  ( 493)  223 44.0  0.0022
XP_011513161 (OMIM: 600830) PREDICTED: tripartite  ( 462)  220 43.6  0.0028
XP_016866752 (OMIM: 600830) PREDICTED: tripartite  ( 462)  220 43.6  0.0028
NP_001008275 (OMIM: 613288) tripartite motif-conta ( 477)  220 43.6  0.0029
NP_439893 (OMIM: 605701) tripartite motif-containi ( 395)  212 42.4  0.0055
XP_016857901 (OMIM: 607868) PREDICTED: E3 ubiquiti ( 467)  212 42.5  0.0062
NP_660215 (OMIM: 607868) E3 ubiquitin-protein liga ( 468)  212 42.5  0.0062
NP_006769 (OMIM: 605701) tripartite motif-containi ( 481)  212 42.5  0.0063
XP_011516700 (OMIM: 254110,602290,615988) PREDICTE ( 653)  214 42.9  0.0065


>>NP_001005207 (OMIM: 253250,605073) E3 ubiquitin-protei  (964 aa)
 initn: 6419 init1: 6419 opt: 6419  Z-score: 4838.4  bits: 906.7 E(85289):    0
Smith-Waterman score: 6419; 100.0% identity (100.0% similar) in 964 aa overlap (1-964:1-964)

               10        20        30        40        50        60
pF1KA0 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA0 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA0 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE
              910       920       930       940       950       960

           
pF1KA0 NSGR
       ::::
NP_001 NSGR
           

>>NP_056109 (OMIM: 253250,605073) E3 ubiquitin-protein l  (964 aa)
 initn: 6419 init1: 6419 opt: 6419  Z-score: 4838.4  bits: 906.7 E(85289):    0
Smith-Waterman score: 6419; 100.0% identity (100.0% similar) in 964 aa overlap (1-964:1-964)

               10        20        30        40        50        60
pF1KA0 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA0 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA0 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE
              910       920       930       940       950       960

           
pF1KA0 NSGR
       ::::
NP_056 NSGR
           

>>XP_016880152 (OMIM: 253250,605073) PREDICTED: E3 ubiqu  (986 aa)
 initn: 6419 init1: 6419 opt: 6419  Z-score: 4838.2  bits: 906.7 E(85289):    0
Smith-Waterman score: 6419; 100.0% identity (100.0% similar) in 964 aa overlap (1-964:1-964)

               10        20        30        40        50        60
pF1KA0 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA0 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA0 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE
              910       920       930       940       950       960

                                 
pF1KA0 NSGR                      
       ::::                      
XP_016 NSGRPLFYSPYPDLVSKSLLREMVLV
              970       980      

>>XP_011523134 (OMIM: 253250,605073) PREDICTED: E3 ubiqu  (989 aa)
 initn: 6419 init1: 6419 opt: 6419  Z-score: 4838.2  bits: 906.7 E(85289):    0
Smith-Waterman score: 6419; 100.0% identity (100.0% similar) in 964 aa overlap (1-964:1-964)

               10        20        30        40        50        60
pF1KA0 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA0 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KA0 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE
              910       920       930       940       950       960

                                    
pF1KA0 NSGR                         
       ::::                         
XP_011 NSGRQLPLSIWCHLVTLQPQLSNGFEKMS
              970       980         

>>NP_001307916 (OMIM: 253250,605073) E3 ubiquitin-protei  (930 aa)
 initn: 6117 init1: 6117 opt: 6117  Z-score: 4611.4  bits: 864.6 E(85289):    0
Smith-Waterman score: 6117; 99.8% identity (100.0% similar) in 925 aa overlap (40-964:6-930)

      10        20        30        40        50        60         
pF1KA0 AEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWA
                                     ..::::::::::::::::::::::::::::
NP_001                          MDEQSVERWLTEQRAQCPHCRAPLQLRELVNCRWA
                                        10        20        30     

      70        80        90       100       110       120         
pF1KA0 EEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTF
          40        50        60        70        80        90     

     130       140       150       160       170       180         
pF1KA0 KPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAVEMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAVEMM
         100       110       120       130       140       150     

     190       200       210       220       230       240         
pF1KA0 IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSSEILMMFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSSEILMMFQ
         160       170       180       190       200       210     

     250       260       270       280       290       300         
pF1KA0 QVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPPLQVSGLCWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPPLQVSGLCWR
         220       230       240       250       260       270     

     310       320       330       340       350       360         
pF1KA0 LKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNIIREFASDFEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNIIREFASDFEV
         280       290       300       310       320       330     

     370       380       390       400       410       420         
pF1KA0 GECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYITQLEAAQTSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYITQLEAAQTSY
         340       350       360       370       380       390     

     430       440       450       460       470       480         
pF1KA0 IQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDMLLEGGPTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDMLLEGGPTTA
         400       410       420       430       440       450     

     490       500       510       520       530       540         
pF1KA0 SVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASSTATSNTEEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASSTATSNTEEN
         460       470       480       490       500       510     

     550       560       570       580       590       600         
pF1KA0 DIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRRTHLCSAATS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRRTHLCSAATS
         520       530       540       550       560       570     

     610       620       630       640       650       660         
pF1KA0 SLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQRKQQAMWRVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQRKQQAMWRVP
         580       590       600       610       620       630     

     670       680       690       700       710       720         
pF1KA0 SDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAALAACGTENS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAALAACGTENS
         640       650       660       670       680       690     

     730       740       750       760       770       780         
pF1KA0 GRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDPGENSRSKGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDPGENSRSKGD
         700       710       720       730       740       750     

     790       800       810       820       830       840         
pF1KA0 CQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVVAVFSGLPAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVVAVFSGLPAV
         760       770       780       790       800       810     

     850       860       870       880       890       900         
pF1KA0 EKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGMSSDSDIECD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGMSSDSDIECD
         820       830       840       850       860       870     

     910       920       930       940       950       960    
pF1KA0 TENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDENSGR
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDENSGR
         880       890       900       910       920       930

>>XP_016880154 (OMIM: 253250,605073) PREDICTED: E3 ubiqu  (955 aa)
 initn: 6117 init1: 6117 opt: 6117  Z-score: 4611.3  bits: 864.6 E(85289):    0
Smith-Waterman score: 6117; 99.8% identity (100.0% similar) in 925 aa overlap (40-964:6-930)

      10        20        30        40        50        60         
pF1KA0 AEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWA
                                     ..::::::::::::::::::::::::::::
XP_016                          MDEQSVERWLTEQRAQCPHCRAPLQLRELVNCRWA
                                        10        20        30     

      70        80        90       100       110       120         
pF1KA0 EEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTF
          40        50        60        70        80        90     

     130       140       150       160       170       180         
pF1KA0 KPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAVEMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAVEMM
         100       110       120       130       140       150     

     190       200       210       220       230       240         
pF1KA0 IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSSEILMMFQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSSEILMMFQ
         160       170       180       190       200       210     

     250       260       270       280       290       300         
pF1KA0 QVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPPLQVSGLCWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPPLQVSGLCWR
         220       230       240       250       260       270     

     310       320       330       340       350       360         
pF1KA0 LKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNIIREFASDFEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNIIREFASDFEV
         280       290       300       310       320       330     

     370       380       390       400       410       420         
pF1KA0 GECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYITQLEAAQTSY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYITQLEAAQTSY
         340       350       360       370       380       390     

     430       440       450       460       470       480         
pF1KA0 IQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDMLLEGGPTTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDMLLEGGPTTA
         400       410       420       430       440       450     

     490       500       510       520       530       540         
pF1KA0 SVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASSTATSNTEEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASSTATSNTEEN
         460       470       480       490       500       510     

     550       560       570       580       590       600         
pF1KA0 DIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRRTHLCSAATS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRRTHLCSAATS
         520       530       540       550       560       570     

     610       620       630       640       650       660         
pF1KA0 SLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQRKQQAMWRVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQRKQQAMWRVP
         580       590       600       610       620       630     

     670       680       690       700       710       720         
pF1KA0 SDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAALAACGTENS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAALAACGTENS
         640       650       660       670       680       690     

     730       740       750       760       770       780         
pF1KA0 GRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDPGENSRSKGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDPGENSRSKGD
         700       710       720       730       740       750     

     790       800       810       820       830       840         
pF1KA0 CQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVVAVFSGLPAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVVAVFSGLPAV
         760       770       780       790       800       810     

     850       860       870       880       890       900         
pF1KA0 EKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGMSSDSDIECD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGMSSDSDIECD
         820       830       840       850       860       870     

     910       920       930       940       950       960         
pF1KA0 TENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDENSGR     
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::     
XP_016 TENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDENSGRQLPLS
         880       890       900       910       920       930     

XP_016 IWCHLVTLQPQLSNGFEKMS
         940       950     

>>XP_005257442 (OMIM: 253250,605073) PREDICTED: E3 ubiqu  (973 aa)
 initn: 5963 init1: 5963 opt: 5964  Z-score: 4496.1  bits: 843.3 E(85289):    0
Smith-Waterman score: 6391; 99.1% identity (99.1% similar) in 973 aa overlap (1-964:1-973)

               10        20        30        40        50        60
pF1KA0 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
              790       800       810       820       830       840

              850       860       870       880       890          
pF1KA0 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEE--
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
XP_005 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEET
              850       860       870       880       890       900

             900       910       920       930       940       950 
pF1KA0 -------GMSSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGP
              :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CSPSFLPGMSSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGP
              910       920       930       940       950       960

             960    
pF1KA0 EDLSFNTDENSGR
       :::::::::::::
XP_005 EDLSFNTDENSGR
              970   

>>XP_016880151 (OMIM: 253250,605073) PREDICTED: E3 ubiqu  (995 aa)
 initn: 5963 init1: 5963 opt: 5964  Z-score: 4495.9  bits: 843.3 E(85289):    0
Smith-Waterman score: 6391; 99.1% identity (99.1% similar) in 973 aa overlap (1-964:1-973)

               10        20        30        40        50        60
pF1KA0 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
              790       800       810       820       830       840

              850       860       870       880       890          
pF1KA0 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEE--
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
XP_016 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEET
              850       860       870       880       890       900

             900       910       920       930       940       950 
pF1KA0 -------GMSSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGP
              :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CSPSFLPGMSSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGP
              910       920       930       940       950       960

             960                          
pF1KA0 EDLSFNTDENSGR                      
       :::::::::::::                      
XP_016 EDLSFNTDENSGRPLFYSPYPDLVSKSLLREMVLV
              970       980       990     

>>XP_011523133 (OMIM: 253250,605073) PREDICTED: E3 ubiqu  (998 aa)
 initn: 5963 init1: 5963 opt: 5964  Z-score: 4495.9  bits: 843.3 E(85289):    0
Smith-Waterman score: 6391; 99.1% identity (99.1% similar) in 973 aa overlap (1-964:1-973)

               10        20        30        40        50        60
pF1KA0 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
              790       800       810       820       830       840

              850       860       870       880       890          
pF1KA0 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEE--
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
XP_011 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEET
              850       860       870       880       890       900

             900       910       920       930       940       950 
pF1KA0 -------GMSSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGP
              :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CSPSFLPGMSSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGP
              910       920       930       940       950       960

             960                             
pF1KA0 EDLSFNTDENSGR                         
       :::::::::::::                         
XP_011 EDLSFNTDENSGRQLPLSIWCHLVTLQPQLSNGFEKMS
              970       980       990        

>>NP_001307918 (OMIM: 253250,605073) E3 ubiquitin-protei  (925 aa)
 initn: 6029 init1: 5961 opt: 5961  Z-score: 4494.1  bits: 842.9 E(85289):    0
Smith-Waterman score: 6059; 96.0% identity (96.0% similar) in 964 aa overlap (1-964:1-925)

               10        20        30        40        50        60
pF1KA0 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KA0 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KA0 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
NP_001 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEE--
              850       860       870       880       890          

              910       920       930       940       950       960
pF1KA0 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE
                                            :::::::::::::::::::::::
NP_001 -------------------------------------DTHSSFPDGEQIGPEDLSFNTDE
                                           900       910       920 

           
pF1KA0 NSGR
       ::::
NP_001 NSGR
           




964 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 03:35:20 2016 done: Mon Nov  7 03:35:22 2016
 Total Scan time: 11.410 Total Display time:  0.320

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com