FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KA0898, 964 aa 1>>>pF1KA0898 964 - 964 aa - 964 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.5176+/-0.000943; mu= 11.8352+/- 0.057 mean_var=146.2698+/-29.740, 0's: 0 Z-trim(109.9): 81 B-trim: 0 in 0/52 Lambda= 0.106047 statistics sampled from 11102 (11183) to 11102 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.69), E-opt: 0.2 (0.344), width: 16 Scan time: 5.010 The best scores are: opt bits E(32554) CCDS32694.1 TRIM37 gene_id:4591|Hs108|chr17 ( 964) 6419 994.5 0 CCDS45746.1 TRIM37 gene_id:4591|Hs108|chr17 ( 964) 6419 994.5 0 CCDS82174.1 TRIM37 gene_id:4591|Hs108|chr17 ( 930) 6117 948.3 0 >>CCDS32694.1 TRIM37 gene_id:4591|Hs108|chr17 (964 aa) initn: 6419 init1: 6419 opt: 6419 Z-score: 5313.3 bits: 994.5 E(32554): 0 Smith-Waterman score: 6419; 100.0% identity (100.0% similar) in 964 aa overlap (1-964:1-964) 10 20 30 40 50 60 pF1KA0 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA0 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA0 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA0 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KA0 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KA0 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII 310 320 330 340 350 360 370 380 390 400 410 420 pF1KA0 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT 370 380 390 400 410 420 430 440 450 460 470 480 pF1KA0 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM 430 440 450 460 470 480 490 500 510 520 530 540 pF1KA0 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KA0 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR 550 560 570 580 590 600 610 620 630 640 650 660 pF1KA0 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR 610 620 630 640 650 660 670 680 690 700 710 720 pF1KA0 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA 670 680 690 700 710 720 730 740 750 760 770 780 pF1KA0 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP 730 740 750 760 770 780 790 800 810 820 830 840 pF1KA0 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV 790 800 810 820 830 840 850 860 870 880 890 900 pF1KA0 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM 850 860 870 880 890 900 910 920 930 940 950 960 pF1KA0 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE 910 920 930 940 950 960 pF1KA0 NSGR :::: CCDS32 NSGR >>CCDS45746.1 TRIM37 gene_id:4591|Hs108|chr17 (964 aa) initn: 6419 init1: 6419 opt: 6419 Z-score: 5313.3 bits: 994.5 E(32554): 0 Smith-Waterman score: 6419; 100.0% identity (100.0% similar) in 964 aa overlap (1-964:1-964) 10 20 30 40 50 60 pF1KA0 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA0 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA0 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA0 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KA0 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KA0 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNII 310 320 330 340 350 360 370 380 390 400 410 420 pF1KA0 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 REFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYIT 370 380 390 400 410 420 430 440 450 460 470 480 pF1KA0 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 QLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDM 430 440 450 460 470 480 490 500 510 520 530 540 pF1KA0 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KA0 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 TATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRR 550 560 570 580 590 600 610 620 630 640 650 660 pF1KA0 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 THLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQR 610 620 630 640 650 660 670 680 690 700 710 720 pF1KA0 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KQQAMWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAA 670 680 690 700 710 720 730 740 750 760 770 780 pF1KA0 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LAACGTENSGRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDP 730 740 750 760 770 780 790 800 810 820 830 840 pF1KA0 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GENSRSKGDCQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVV 790 800 810 820 830 840 850 860 870 880 890 900 pF1KA0 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 AVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGM 850 860 870 880 890 900 910 920 930 940 950 960 pF1KA0 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 SSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDE 910 920 930 940 950 960 pF1KA0 NSGR :::: CCDS45 NSGR >>CCDS82174.1 TRIM37 gene_id:4591|Hs108|chr17 (930 aa) initn: 6117 init1: 6117 opt: 6117 Z-score: 5063.9 bits: 948.3 E(32554): 0 Smith-Waterman score: 6117; 99.8% identity (100.0% similar) in 925 aa overlap (40-964:6-930) 10 20 30 40 50 60 pF1KA0 AEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWA ..:::::::::::::::::::::::::::: CCDS82 MDEQSVERWLTEQRAQCPHCRAPLQLRELVNCRWA 10 20 30 70 80 90 100 110 120 pF1KA0 EEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 EEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTF 40 50 60 70 80 90 130 140 150 160 170 180 pF1KA0 KPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAVEMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 KPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAVEMM 100 110 120 130 140 150 190 200 210 220 230 240 pF1KA0 IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSSEILMMFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 IARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSSEILMMFQ 160 170 180 190 200 210 250 260 270 280 290 300 pF1KA0 QVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPPLQVSGLCWR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 QVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPPLQVSGLCWR 220 230 240 250 260 270 310 320 330 340 350 360 pF1KA0 LKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNIIREFASDFEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 LKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNIIREFASDFEV 280 290 300 310 320 330 370 380 390 400 410 420 pF1KA0 GECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYITQLEAAQTSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 GECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYITQLEAAQTSY 340 350 360 370 380 390 430 440 450 460 470 480 pF1KA0 IQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDMLLEGGPTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 IQQINNLKERLTIELSRTQKSRDLSPPDNHLSPQNDDALETRAKKSACSDMLLEGGPTTA 400 410 420 430 440 450 490 500 510 520 530 540 pF1KA0 SVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASSTATSNTEEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVYEDEVNQLDGSSSSASSTATSNTEEN 460 470 480 490 500 510 550 560 570 580 590 600 pF1KA0 DIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRRTHLCSAATS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 DIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSSSRISRRTHLCSAATS 520 530 540 550 560 570 610 620 630 640 650 660 pF1KA0 SLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQRKQQAMWRVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQRKQQAMWRVP 580 590 600 610 620 630 670 680 690 700 710 720 pF1KA0 SDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAALAACGTENS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAALAACGTENS 640 650 660 670 680 690 730 740 750 760 770 780 pF1KA0 GRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDPGENSRSKGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 GRLQDLGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDPGENSRSKGD 700 710 720 730 740 750 790 800 810 820 830 840 pF1KA0 CQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVVAVFSGLPAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 CQTLSEGSPGSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVVAVFSGLPAV 760 770 780 790 800 810 850 860 870 880 890 900 pF1KA0 EKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGMSSDSDIECD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 EKRRKMVTLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGMSSDSDIECD 820 830 840 850 860 870 910 920 930 940 950 960 pF1KA0 TENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDENSGR ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 TENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDENSGR 880 890 900 910 920 930 964 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:35:19 2016 done: Mon Nov 7 03:35:20 2016 Total Scan time: 5.010 Total Display time: 0.140 Function used was FASTA [36.3.4 Apr, 2011]