Restriction map for pFN21AA0898
 (Linear) (Six-base) MAPSORT of: KIAA0898.seq  Check: 9983  from: 1  to: 2892



KIAA0898.orf

 With 182 enzymes: SgfI * 

                        July 15, 2010 18:28  ..

AarI CACCTGCnnnn'nnnn_

Cuts at:      0    1932    2892 
   Size:       1932     960
 
AcuI CTGAAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     610     649    2402    2495    2660    2687    2708    2873 
   Size:        610      39    1753      93     165      27      21     165

Cuts at:   2873    2892 
   Size:         19

  Fragments arranged by size: 

                1753     610     165     165      93      39      27      21
                  19
 
AflII C'TTAA_G

Cuts at:      0    1873    2892 
   Size:       1873    1019
 
AflIII A'CryG_T

Cuts at:      0     414    2892 
   Size:        414    2478
 
AleI CACnn'nnGTG

Cuts at:      0      78     424    2892 
   Size:         78     346    2468

  Fragments arranged by size: 

                2468     346      78
 
AlwNI CAG_nnn'CTG

Cuts at:      0     883    1468    1738    2376    2509    2892 
   Size:        883     585     270     638     133     383

  Fragments arranged by size: 

                 883     638     585     383     270     133
 
ApaLI G'TGCA_C

Cuts at:      0     350    2892 
   Size:        350    2542
 
ApoI r'AATT_y

Cuts at:      0     401     852    1084    1896    2892 
   Size:        401     451     232     812     996

  Fragments arranged by size: 

                 996     812     451     401     232
 
AseI AT'TA_AT

Cuts at:      0    1849    2892 
   Size:       1849    1043
 
AvaI C'yCGr_G

Cuts at:      0    1235    2429    2892 
   Size:       1235    1194     463

  Fragments arranged by size: 

                1235    1194     463
 
BanII G_rGCy'C

Cuts at:      0     147     724     992    2892 
   Size:        147     577     268    1900

  Fragments arranged by size: 

                1900     577     268     147
 
BbsI GAAGACnn'nnnn_

Cuts at:      0     628    2483    2892 
   Size:        628    1855     409

  Fragments arranged by size: 

                1855     628     409
 
BbvCI CC'TCA_GC

Cuts at:      0      29    2892 
   Size:         29    2863
 
BcgI CGAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:      0     736     770    2892 
   Size:        736      34    2122

  Fragments arranged by size: 

                2122     736      34
 
BciVI GTATCCnnnnn_n'

Cuts at:      0    1156    2892 
   Size:       1156    1736
 
BclI T'GATC_A

Cuts at:      0     470    2892 
   Size:        470    2422
 
BfrBI ATG'CAT

Cuts at:      0     369    2892 
   Size:        369    2523
 
BglII A'GATC_T

Cuts at:      0    1548    2856    2892 
   Size:       1548    1308      36

  Fragments arranged by size: 

                1548    1308      36
 
Bme1580I G_kGCm'C

Cuts at:      0     354    2006    2892 
   Size:        354    1652     886

  Fragments arranged by size: 

                1652     886     354
 
BmgBI CAC'GTC

Cuts at:      0     417    2892 
   Size:        417    2475
 
BpmI CTGGAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     157     942    1006    1423    1691    2138    2360    2663 
   Size:        157     785      64     417     268     447     222     303

Cuts at:   2663    2892 
   Size:        229

  Fragments arranged by size: 

                 785     447     417     303     268     229     222     157
                  64
 
Bpu10I CC'TnA_GC

Cuts at:      0      29    2892 
   Size:         29    2863
 
BsaBI GATnn'nnATC

Cuts at:      0    1373    1526    1547    1553    1559    2892 
   Size:       1373     153      21       6       6    1333

  Fragments arranged by size: 

                1373    1333     153      21       6       6
 
BsaHI Gr'CG_yC

Cuts at:      0     456    2892 
   Size:        456    2436
 
BsaWI w'CCGG_w

Cuts at:      0    1880    2892 
   Size:       1880    1012
 
BsaXI ACnnnnnCTCCnnnnnnn_nnn'

Cuts at:      0     667     697    2892 
   Size:        667      30    2195

  Fragments arranged by size: 

                2195     667      30
 
BseRI GAGGAGnnnnnnnn_nn'

Cuts at:      0    1516    2752    2892 
   Size:       1516    1236     140

  Fragments arranged by size: 

                1516    1236     140
 
BseYI C'CCAG_C

Cuts at:      0    1115    2892 
   Size:       1115    1777
 
BsgI GTGCAGnnnnnnnnnnnnnn_nn'

Cuts at:      0    1256    2892 
   Size:       1256    1636
 
BsiHKAI G_wGCw'C

Cuts at:      0     147     168     354     680     724     992    2892 
   Size:        147      21     186     326      44     268    1900

  Fragments arranged by size: 

                1900     326     268     186     147      44      21
 
BsmI GAATG_Cn'

Cuts at:      0     371     555    1117    2892 
   Size:        371     184     562    1775

  Fragments arranged by size: 

                1775     562     371     184
 
BsmBI CGTCTCn'nnnn_

Cuts at:      0     463    2892 
   Size:        463    2429
 
Bsp1286I G_dGCh'C

Cuts at:      0     147     168     354     680     724     992    2006    2892 
   Size:        147      21     186     326      44     268    1014     886

  Fragments arranged by size: 

                1014     886     326     268     186     147      44      21
            
 
BspHI T'CATG_A

Cuts at:      0    2789    2892 
   Size:       2789     103
 
BspMI ACCTGCnnnn'nnnn_

Cuts at:      0    1741    1932    2296    2892 
   Size:       1741     191     364     596

  Fragments arranged by size: 

                1741     596     364     191
 
BsrDI GCAATG_nn'

Cuts at:      0      23      87     156    1997    2892 
   Size:         23      64      69    1841     895

  Fragments arranged by size: 

                1841     895      69      64      23
 
BsrFI r'CCGG_y

Cuts at:      0    2480    2892 
   Size:       2480     412
 
BssSI C'ACGA_G

Cuts at:      0    1409    1531    2892 
   Size:       1409     122    1361

  Fragments arranged by size: 

                1409    1361     122
 
BstAPI GCAn_nnn'nTGC

Cuts at:      0     684    1738    2892 
   Size:        684    1054    1154

  Fragments arranged by size: 

                1154    1054     684
 
BstBI TT'CG_AA

Cuts at:      0    2322    2892 
   Size:       2322     570
 
BstEII G'GTnAC_C

Cuts at:      0    2565    2892 
   Size:       2565     327
 
BstYI r'GATC_y

Cuts at:      0     728     879    1548    1554    1560    2856    2892 
   Size:        728     151     669       6       6    1296      36

  Fragments arranged by size: 

                1296     728     669     151      36       6       6
 
BtgI C'CryG_G

Cuts at:      0     764    1761    2892 
   Size:        764     997    1131

  Fragments arranged by size: 

                1131     997     764
 
BtsI GCAGTG_nn'

Cuts at:      0     560    2112    2336    2491    2892 
   Size:        560    1552     224     155     401

  Fragments arranged by size: 

                1552     560     401     224     155
 
DraI TTT'AAA

Cuts at:      0     387    2015    2892 
   Size:        387    1628     877

  Fragments arranged by size: 

                1628     877     387
 
EaeI y'GGCC_r

Cuts at:      0    2045    2892 
   Size:       2045     847
 
EarI CTCTTCn'nnn_

Cuts at:      0     239     428     905    1703    2263    2319    2741    2892 
   Size:        239     189     477     798     560      56     422     151

  Fragments arranged by size: 

                 798     560     477     422     239     189     151      56
            
 
EciI GGCGGAnnnnnnnnn_nn'

Cuts at:      0     389    2892 
   Size:        389    2503
 
EcoICRI GAG'CTC

Cuts at:      0     145     722     990    2892 
   Size:        145     577     268    1902

  Fragments arranged by size: 

                1902     577     268     145
 
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     157     610     649     942    1006    1423    1691    2138 
   Size:        157     453      39     293      64     417     268     447

Cuts at:   2138    2360    2402    2495    2660    2663    2687    2708    2873 
   Size:        222      42      93     165       3      24      21     165

Cuts at:   2873    2892 
   Size:         19

  Fragments arranged by size: 

                 453     447     417     293     268     222     165     165
                 157      93      64      42      39      24      21      19
                   3
 
EcoNI CCTnn'n_nnAGG

Cuts at:      0    2690    2892 
   Size:       2690     202
 
EcoO109I rG'GnC_Cy

Cuts at:      0    1744    2848    2892 
   Size:       1744    1104      44

  Fragments arranged by size: 

                1744    1104      44
 
EcoRV GAT'ATC

Cuts at:      0     713    2892 
   Size:        713    2179
 
FalI AAGnnnnnCTTnnnnnnnn_nnnnn'

Cuts at:      0    1333    2892 
   Size:       1333    1559
 
HaeII r_GCGC'y

Cuts at:      0     126    2892 
   Size:        126    2766
 
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'

Cuts at:      0     697     729     864     896    2892 
   Size:        697      32     135      32    1996

  Fragments arranged by size: 

                1996     697     135      32      32
 
HindIII A'AGCT_T

Cuts at:      0     598    2492    2892 
   Size:        598    1894     400

  Fragments arranged by size: 

                1894     598     400
 
MfeI C'AATT_G

Cuts at:      0    2238    2892 
   Size:       2238     654
 
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'

Cuts at:      0    1086    1244    1314    1847    2892 
   Size:       1086     158      70     533    1045

  Fragments arranged by size: 

                1086    1045     533     158      70
 
MslI CAynn'nnrTG

Cuts at:      0      52      78     161     347     424    1766    1806    2756 
   Size:         52      26      83     186      77    1342      40     950

Cuts at:   2756    2788    2892 
   Size:         32     104

  Fragments arranged by size: 

                1342     950     186     104      83      77      52      40
                  32      26
 
MspA1I CmG'CkG

Cuts at:      0     113     588     997    1735    1816    2680    2892 
   Size:        113     475     409     738      81     864     212

  Fragments arranged by size: 

                 864     738     475     409     212     113      81
 
NcoI C'CATG_G

Cuts at:      0     764    1761    2892 
   Size:        764     997    1131

  Fragments arranged by size: 

                1131     997     764
 
NsiI A_TGCA'T

Cuts at:      0     371    2892 
   Size:        371    2521
 
NspI r_CATG'y

Cuts at:      0    1430    1440    2127    2171    2892 
   Size:       1430      10     687      44     721

  Fragments arranged by size: 

                1430     721     687      44      10
 
PpuMI rG'GwC_Cy

Cuts at:      0    1744    2892 
   Size:       1744    1148
 
PsiI TTA'TAA

Cuts at:      0     604    2892 
   Size:        604    2288
 
PsrI GAACnnnnnnTACnnnnnnn_nnnnn'

Cuts at:      0    1025    1057    2892 
   Size:       1025      32    1835

  Fragments arranged by size: 

                1835    1025      32
 
PstI C_TGCA'G

Cuts at:      0     247    1743    1940    2612    2892 
   Size:        247    1496     197     672     280

  Fragments arranged by size: 

                1496     672     280     247     197
 
PvuII CAG'CTG

Cuts at:      0     113     588     997    1735    2680    2892 
   Size:        113     475     409     738     945     212

  Fragments arranged by size: 

                 945     738     475     409     212     113
 
SacI G_AGCT'C

Cuts at:      0     147     724     992    2892 
   Size:        147     577     268    1900

  Fragments arranged by size: 

                1900     577     268     147
 
SapI GCTCTTCn'nnn_

Cuts at:      0    2319    2741    2892 
   Size:       2319     422     151

  Fragments arranged by size: 

                2319     422     151
 
SfcI C'TryA_G

Cuts at:      0     243    1460    1739    1936    2608    2892 
   Size:        243    1217     279     197     672     284

  Fragments arranged by size: 

                1217     672     284     279     243     197
 
SmaI CCC'GGG

Cuts at:      0    1237    2892 
   Size:       1237    1655
 
SmlI C'TyrA_G

Cuts at:      0    1873    2892 
   Size:       1873    1019
 
SpeI A'CTAG_T

Cuts at:      0     186    1279    2892 
   Size:        186    1093    1613

  Fragments arranged by size: 

                1613    1093     186
 
SphI G_CATG'C

Cuts at:      0    1430    2892 
   Size:       1430    1462
 
StyI C'CwwG_G

Cuts at:      0     764    1761    2570    2892 
   Size:        764     997     809     322

  Fragments arranged by size: 

                 997     809     764     322
 
TatI w'GTAC_w

Cuts at:      0    2658    2892 
   Size:       2658     234
 
TstI CACnnnnnnTCCnnnnnnn_nnnnn'

Cuts at:      0     774     806    2892 
   Size:        774      32    2086

  Fragments arranged by size: 

                2086     774      32
 
Tth111I GACn'n_nGTC

Cuts at:      0    2376    2892 
   Size:       2376     516
 
XmaI C'CCGG_G

Cuts at:      0    1235    2892 
   Size:       1235    1657
 

 Enzymes that do cut:

     AarI     AcuI    AflII   AflIII     AleI    AlwNI    ApaLI     ApoI
     AseI     AvaI    BanII     BbsI    BbvCI     BcgI    BciVI     BclI
    BfrBI    BglII Bme1580I    BmgBI     BpmI   Bpu10I    BsaBI    BsaHI
    BsaWI    BsaXI    BseRI    BseYI     BsgI  BsiHKAI     BsmI    BsmBI
 Bsp1286I    BspHI    BspMI    BsrDI    BsrFI    BssSI   BstAPI    BstBI
   BstEII    BstYI     BtgI     BtsI     DraI     EaeI     EarI     EciI
  EcoICRI  Eco57MI    EcoNI EcoO109I    EcoRV     FalI    HaeII    Hin4I
  HindIII     MfeI     MmeI     MslI   MspA1I     NcoI     NsiI     NspI
    PpuMI     PsiI     PsrI     PstI    PvuII     SacI     SapI     SfcI
     SmaI     SmlI     SpeI     SphI     StyI     TatI     TstI  Tth111I
     XmaI

 Enzymes that do not cut: 

    AatII     AccI   Acc65I     AclI     AfeI     AgeI     AhdI     AlfI
     AloI     ApaI     AscI    AsiSI    AvrII     BaeI    BamHI     BanI
     BbeI     BglI     BlpI     BmrI     BmtI     BplI    BpuEI     BsaI
    BsaAI    BsiEI    BsiWI    BspEI    BsrBI    BsrGI   BssHII    BstXI
  BstZ17I   Bsu36I    BtgZI     ClaI    CspCI   DraIII     DrdI     EagI
    EcoRI     FseI     FspI    FspAI   HincII     HpaI     KasI     KpnI
     MluI     MscI     NaeI     NarI     NdeI   NgoMIV     NheI     NotI
     NruI     PacI     PasI     PciI    PflMI     PfoI     PmeI     PmlI
     PpiI    PshAI   PspOMI    PspXI     PvuI    RsrII    SacII     SalI
    SanDI     SbfI     ScaI    SexAI     SfiI     SfoI     SgfI    SgrAI
    SnaBI     SrfI     SspI     StuI     SwaI    TaqII     XbaI     XcmI
     XhoI     XmnI     ZraI
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