FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7321, 1199 aa 1>>>pF1KB7321 1199 - 1199 aa - 1199 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.0238+/-0.00136; mu= 8.1791+/- 0.081 mean_var=124.4536+/-25.087, 0's: 0 Z-trim(103.3): 67 B-trim: 53 in 1/49 Lambda= 0.114966 statistics sampled from 7298 (7323) to 7298 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.571), E-opt: 0.2 (0.225), width: 16 Scan time: 4.840 The best scores are: opt bits E(32554) CCDS34937.1 TAF2 gene_id:6873|Hs108|chr8 (1199) 8092 1354.8 0 >>CCDS34937.1 TAF2 gene_id:6873|Hs108|chr8 (1199 aa) initn: 8092 init1: 8092 opt: 8092 Z-score: 7256.9 bits: 1354.8 E(32554): 0 Smith-Waterman score: 8092; 99.9% identity (100.0% similar) in 1199 aa overlap (1-1199:1-1199) 10 20 30 40 50 60 pF1KB7 MPLTGVEPARMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MPLTGVEPARMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVSAVDPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVSAVDPD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 AGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 AGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 GYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 GYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 PTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 PTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB7 YSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 YSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFIS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB7 RMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 RMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB7 GKEKDNPASHLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLA ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: CCDS34 GKEKDNPASHLHFSIKHPHTLSWEYYSMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB7 STASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 STASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRK 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB7 RNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 RNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNK 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB7 KKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVV 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB7 AQQESILALEKFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 AQQESILALEKFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMK 670 680 690 700 710 720 730 740 750 760 770 780 pF1KB7 SLFTRMFCCKSCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SLFTRMFCCKSCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIK 730 740 750 760 770 780 790 800 810 820 830 840 pF1KB7 YNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 YNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNME 790 800 810 820 830 840 850 860 870 880 890 900 pF1KB7 KLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFVDIRIAALEAVVDYTKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFVDIRIAALEAVVDYTKV 850 860 870 880 890 900 910 920 930 940 950 960 pF1KB7 DRSYEELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 DRSYEELQWLLNMIQNDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSG 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KB7 TSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPESVAGNQEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPESVAGNQEA 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KB7 ANNPSSHPQLVGFQNPFSSSQDEEEIDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ANNPSSHPQLVGFQNPFSSSQDEEEIDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPAS 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KB7 SRSALIPQHSAGCDSTPTTKPQWSLELARKGTGKEQAPLEMSMHPAASAPLSVFTKESTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SRSALIPQHSAGCDSTPTTKPQWSLELARKGTGKEQAPLEMSMHPAASAPLSVFTKESTA 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 pF1KB7 SKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDSKEKDKEPFTFSSPASGRSIRSPSLSD ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDSKEKDKEPFTFSSPASGRSIRSPSLSD 1150 1160 1170 1180 1190 1199 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:36:35 2016 done: Mon Nov 7 03:36:36 2016 Total Scan time: 4.840 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]