Result of FASTA (omim) for
pFN21AB6439
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6439, 314 aa
1>>>pF1KB6439 314 - 314 aa - 314 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8602+/-0.000401; mu= 20.9541+/- 0.026
mean_var=208.0521+/-52.457, 0's: 0 Z-trim(115.2): 253 B-trim: 1476 in 1/55
Lambda= 0.088918
statistics sampled from 25044 (25503) to 25044 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.299), width: 16
Scan time: 7.710
The best scores are: opt bits E(85289)
XP_016855540 (OMIM: 602435) PREDICTED: peptidyl-pr ( 314) 2122 285.1 1.3e-76
NP_001181936 (OMIM: 602435) peptidyl-prolyl cis-tr ( 314) 2122 285.1 1.3e-76
NP_006103 (OMIM: 602435) peptidyl-prolyl cis-trans ( 301) 1895 255.9 7.2e-68
NP_982281 (OMIM: 602435) peptidyl-prolyl cis-trans ( 296) 1890 255.3 1.1e-67
XP_011538803 (OMIM: 602435) PREDICTED: peptidyl-pr ( 230) 1584 215.8 6.6e-56
XP_016855541 (OMIM: 602435) PREDICTED: peptidyl-pr ( 217) 1357 186.7 3.7e-47
XP_006710352 (OMIM: 602435) PREDICTED: peptidyl-pr ( 301) 1209 167.9 2.2e-41
XP_006710353 (OMIM: 602435) PREDICTED: peptidyl-pr ( 288) 982 138.8 1.3e-32
NP_001306222 (OMIM: 602435) peptidyl-prolyl cis-tr ( 283) 977 138.1 2e-32
NP_005720 (OMIM: 604486) peptidyl-prolyl cis-trans ( 207) 769 111.2 1.9e-24
NP_066953 (OMIM: 123840) peptidyl-prolyl cis-trans ( 165) 713 103.8 2.5e-22
XP_005269436 (OMIM: 604486) PREDICTED: peptidyl-pr ( 201) 655 96.5 4.6e-20
XP_011509880 (OMIM: 601181,608033) PREDICTED: E3 S (2281) 647 97.5 2.7e-19
XP_005264064 (OMIM: 601181,608033) PREDICTED: E3 S (2282) 647 97.5 2.7e-19
XP_011509878 (OMIM: 601181,608033) PREDICTED: E3 S (3199) 647 97.8 3.1e-19
NP_006258 (OMIM: 601181,608033) E3 SUMO-protein li (3224) 647 97.8 3.1e-19
XP_005264062 (OMIM: 601181,608033) PREDICTED: E3 S (3232) 647 97.8 3.1e-19
XP_005264061 (OMIM: 601181,608033) PREDICTED: E3 S (3232) 647 97.8 3.1e-19
XP_005264060 (OMIM: 601181,608033) PREDICTED: E3 S (3250) 647 97.8 3.1e-19
XP_011509877 (OMIM: 601181,608033) PREDICTED: E3 S (3257) 647 97.8 3.1e-19
XP_005264059 (OMIM: 601181,608033) PREDICTED: E3 S (3258) 647 97.8 3.2e-19
NP_006338 (OMIM: 606095) peptidyl-prolyl cis-trans ( 177) 624 92.5 6.9e-19
XP_005270419 (OMIM: 606095) PREDICTED: peptidyl-pr ( 177) 624 92.5 6.9e-19
XP_016855546 (OMIM: 606095) PREDICTED: peptidyl-pr ( 177) 624 92.5 6.9e-19
NP_001137504 (OMIM: 608608) peptidyl-prolyl cis-tr ( 164) 623 92.3 7.3e-19
NP_000933 (OMIM: 123841,259440) peptidyl-prolyl ci ( 216) 600 89.6 6.4e-18
NP_005029 (OMIM: 601753) peptidyl-prolyl cis-trans ( 370) 591 88.8 1.8e-17
NP_000934 (OMIM: 123842) peptidyl-prolyl cis-trans ( 212) 576 86.5 5.3e-17
XP_016860791 (OMIM: 606093) PREDICTED: peptidyl-pr ( 272) 544 82.6 1e-15
XP_005247023 (OMIM: 606093) PREDICTED: peptidyl-pr ( 754) 544 83.4 1.6e-15
XP_005247024 (OMIM: 606093) PREDICTED: peptidyl-pr ( 754) 544 83.4 1.6e-15
NP_004783 (OMIM: 606093) peptidyl-prolyl cis-trans ( 754) 544 83.4 1.6e-15
XP_016861963 (OMIM: 161565) PREDICTED: NK-tumor re (1435) 545 84.0 1.9e-15
XP_006713234 (OMIM: 161565) PREDICTED: NK-tumor re (1436) 545 84.0 1.9e-15
NP_005376 (OMIM: 161565) NK-tumor recognition prot (1462) 545 84.1 1.9e-15
XP_005265230 (OMIM: 161565) PREDICTED: NK-tumor re (1463) 545 84.1 1.9e-15
XP_016855547 (OMIM: 606095) PREDICTED: peptidyl-pr ( 134) 488 74.8 1.1e-13
XP_016855548 (OMIM: 606095) PREDICTED: peptidyl-pr ( 134) 488 74.8 1.1e-13
NP_001317439 (OMIM: 606095) peptidyl-prolyl cis-tr ( 134) 488 74.8 1.1e-13
NP_001287910 (OMIM: 123840) peptidyl-prolyl cis-tr ( 105) 474 72.8 3.4e-13
NP_057143 (OMIM: 601301) peptidyl-prolyl cis-trans ( 166) 394 62.9 5.1e-10
XP_016884195 (OMIM: 607588) PREDICTED: peptidyl-pr ( 266) 380 61.5 2.2e-09
XP_016884194 (OMIM: 607588) PREDICTED: peptidyl-pr ( 362) 380 61.8 2.5e-09
XP_011528351 (OMIM: 607588) PREDICTED: peptidyl-pr ( 438) 380 61.9 2.7e-09
XP_011528353 (OMIM: 607588) PREDICTED: peptidyl-pr ( 438) 380 61.9 2.7e-09
XP_011528352 (OMIM: 607588) PREDICTED: peptidyl-pr ( 438) 380 61.9 2.7e-09
NP_001304925 (OMIM: 607588) peptidyl-prolyl cis-tr ( 520) 380 62.1 2.9e-09
XP_005261505 (OMIM: 607588) PREDICTED: peptidyl-pr ( 520) 380 62.1 2.9e-09
XP_011528349 (OMIM: 607588) PREDICTED: peptidyl-pr ( 520) 380 62.1 2.9e-09
XP_011528348 (OMIM: 607588) PREDICTED: peptidyl-pr ( 520) 380 62.1 2.9e-09
>>XP_016855540 (OMIM: 602435) PREDICTED: peptidyl-prolyl (314 aa)
initn: 2122 init1: 2122 opt: 2122 Z-score: 1496.7 bits: 285.1 E(85289): 1.3e-76
Smith-Waterman score: 2122; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:1-314)
10 20 30 40 50 60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
250 260 270 280 290 300
310
pF1KB6 RNWGKSQKVESHTI
::::::::::::::
XP_016 RNWGKSQKVESHTI
310
>>NP_001181936 (OMIM: 602435) peptidyl-prolyl cis-trans (314 aa)
initn: 2122 init1: 2122 opt: 2122 Z-score: 1496.7 bits: 285.1 E(85289): 1.3e-76
Smith-Waterman score: 2122; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:1-314)
10 20 30 40 50 60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
250 260 270 280 290 300
310
pF1KB6 RNWGKSQKVESHTI
::::::::::::::
NP_001 RNWGKSQKVESHTI
310
>>NP_006103 (OMIM: 602435) peptidyl-prolyl cis-trans iso (301 aa)
initn: 1890 init1: 1890 opt: 1895 Z-score: 1339.4 bits: 255.9 E(85289): 7.2e-68
Smith-Waterman score: 1895; 97.2% identity (98.3% similar) in 290 aa overlap (1-290:1-289)
10 20 30 40 50 60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
::::::::::::::::::::::::::::::::::::::: : .: .: .
NP_006 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE-AQGSKDGKPKQKVIIADCGE
250 260 270 280 290
310
pF1KB6 RNWGKSQKVESHTI
NP_006 YV
300
>>NP_982281 (OMIM: 602435) peptidyl-prolyl cis-trans iso (296 aa)
initn: 1890 init1: 1890 opt: 1890 Z-score: 1336.0 bits: 255.3 E(85289): 1.1e-67
Smith-Waterman score: 1890; 100.0% identity (100.0% similar) in 279 aa overlap (1-279:1-279)
10 20 30 40 50 60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_982 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_982 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_982 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_982 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
:::::::::::::::::::::::::::::::::::::::
NP_982 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEKQEESAITSQPRSWKLT
250 260 270 280 290
310
pF1KB6 RNWGKSQKVESHTI
>>XP_011538803 (OMIM: 602435) PREDICTED: peptidyl-prolyl (230 aa)
initn: 1584 init1: 1584 opt: 1584 Z-score: 1124.7 bits: 215.8 E(85289): 6.6e-56
Smith-Waterman score: 1584; 100.0% identity (100.0% similar) in 230 aa overlap (85-314:1-230)
60 70 80 90 100 110
pF1KB6 ELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENK
::::::::::::::::::::::::::::::
XP_011 MRIKEGSSRPVWSDDDWLKKFSGKTLEENK
10 20 30
120 130 140 150 160 170
pF1KB6 EEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB6 LCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLL
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB6 SMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRK
160 170 180 190 200 210
300 310
pF1KB6 NKDGQERNWGKSQKVESHTI
::::::::::::::::::::
XP_011 NKDGQERNWGKSQKVESHTI
220 230
>>XP_016855541 (OMIM: 602435) PREDICTED: peptidyl-prolyl (217 aa)
initn: 1352 init1: 1352 opt: 1357 Z-score: 967.6 bits: 186.7 E(85289): 3.7e-47
Smith-Waterman score: 1357; 96.1% identity (97.6% similar) in 206 aa overlap (85-290:1-205)
60 70 80 90 100 110
pF1KB6 ELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENK
::::::::::::::::::::::::::::::
XP_016 MRIKEGSSRPVWSDDDWLKKFSGKTLEENK
10 20 30
120 130 140 150 160 170
pF1KB6 EEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRC
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB6 LCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLL
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB6 SMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRK
::::::::::::::::::::::::::::::::::::::::::::: : .: .: .
XP_016 SMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE-AQGSKDGKPKQKVI
160 170 180 190 200
300 310
pF1KB6 NKDGQERNWGKSQKVESHTI
XP_016 IADCGEYV
210
>>XP_006710352 (OMIM: 602435) PREDICTED: peptidyl-prolyl (301 aa)
initn: 1198 init1: 1198 opt: 1209 Z-score: 863.8 bits: 167.9 E(85289): 2.2e-41
Smith-Waterman score: 1999; 95.9% identity (95.9% similar) in 314 aa overlap (1-314:1-301)
10 20 30 40 50 60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
:::::::: :::::::::::::::::::::::::::::::::::::::
XP_006 PPKAETQE-------------VYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
130 140 150 160
190 200 210 220 230 240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
230 240 250 260 270 280
310
pF1KB6 RNWGKSQKVESHTI
::::::::::::::
XP_006 RNWGKSQKVESHTI
290 300
>>XP_006710353 (OMIM: 602435) PREDICTED: peptidyl-prolyl (288 aa)
initn: 966 init1: 966 opt: 982 Z-score: 706.6 bits: 138.8 E(85289): 1.3e-32
Smith-Waterman score: 1772; 92.8% identity (93.8% similar) in 290 aa overlap (1-290:1-276)
10 20 30 40 50 60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
:::::::: :::::::::::::::::::::::::::::::::::::::
XP_006 PPKAETQE-------------VYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
130 140 150 160
190 200 210 220 230 240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
::::::::::::::::::::::::::::::::::::::: : .: .: .
XP_006 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE-AQGSKDGKPKQKVIIADCGE
230 240 250 260 270 280
310
pF1KB6 RNWGKSQKVESHTI
XP_006 YV
>>NP_001306222 (OMIM: 602435) peptidyl-prolyl cis-trans (283 aa)
initn: 966 init1: 966 opt: 977 Z-score: 703.2 bits: 138.1 E(85289): 2e-32
Smith-Waterman score: 1767; 95.3% identity (95.3% similar) in 279 aa overlap (1-279:1-266)
10 20 30 40 50 60
pF1KB6 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AAAIDNMNESELFGRTIRVNLAKPMRIKEGSSRPVWSDDDWLKKFSGKTLEENKEEEGSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
:::::::: :::::::::::::::::::::::::::::::::::::::
NP_001 PPKAETQE-------------VYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK
130 140 150 160
190 200 210 220 230 240
pF1KB6 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSG
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB6 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEVAPDTKASKARGSRKNKDGQE
:::::::::::::::::::::::::::::::::::::::
NP_001 PNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEKQEESAITSQPRSWKLT
230 240 250 260 270 280
310
pF1KB6 RNWGKSQKVESHTI
>>NP_005720 (OMIM: 604486) peptidyl-prolyl cis-trans iso (207 aa)
initn: 769 init1: 769 opt: 769 Z-score: 560.1 bits: 111.2 E(85289): 1.9e-24
Smith-Waterman score: 769; 68.9% identity (88.7% similar) in 151 aa overlap (129-279:35-185)
100 110 120 130 140 150
pF1KB6 DDWLKKFSGKTLEENKEEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQM
:.: .... .:: ::.:. ..:: ::. .
NP_005 RCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVL
10 20 30 40 50 60
160 170 180 190 200 210
pF1KB6 LLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKK
:..:::: :::::: ::: :::::.:::.:::.::.::::.::::::::::::::::..
NP_005 ELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSR
70 80 90 100 110 120
220 230 240 250 260 270
pF1KB6 FDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQI
: :::: :::.:::.:::::.::::::::::. :::::::::::::.: ::.::...:
NP_005 FPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKI
130 140 150 160 170 180
280 290 300 310
pF1KB6 EVAPDTKASKARGSRKNKDGQERNWGKSQKVESHTI
:
NP_005 ESFGSKSGRTSKKIVITDCGQLS
190 200
314 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 22:59:30 2016 done: Fri Nov 4 22:59:31 2016
Total Scan time: 7.710 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]