Result of FASTA (omim) for
pFN21AB6734
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6734, 138 aa
1>>>pF1KB6734 138 - 138 aa - 138 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0922+/-0.000304; mu= 12.1770+/- 0.019
mean_var=68.8231+/-13.747, 0's: 0 Z-trim(118.4): 43 B-trim: 89 in 1/53
Lambda= 0.154599
statistics sampled from 31246 (31295) to 31246 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.367), width: 16
Scan time: 4.220
The best scores are: opt bits E(85289)
XP_011539892 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
NP_000920 (OMIM: 228980,601192) calcium-dependent ( 138) 1052 242.8 1.3e-64
XP_005245950 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
XP_011539894 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
XP_011539890 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
XP_011539891 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
XP_011539889 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
XP_011539893 (OMIM: 228980,601192) PREDICTED: calc ( 138) 1052 242.8 1.3e-64
XP_005245948 (OMIM: 228980,601192) PREDICTED: calc ( 169) 1052 242.9 1.5e-64
XP_011539888 (OMIM: 228980,601192) PREDICTED: calc ( 169) 1052 242.9 1.5e-64
XP_005245949 (OMIM: 228980,601192) PREDICTED: calc ( 169) 1052 242.9 1.5e-64
NP_036532 (OMIM: 605630) group IID secretory phosp ( 145) 473 113.7 1e-25
NP_001155199 (OMIM: 172411) phospholipase A2, memb ( 144) 462 111.2 5.5e-25
NP_001155200 (OMIM: 172411) phospholipase A2, memb ( 144) 462 111.2 5.5e-25
NP_001155201 (OMIM: 172411) phospholipase A2, memb ( 144) 462 111.2 5.5e-25
NP_000291 (OMIM: 172411) phospholipase A2, membran ( 144) 462 111.2 5.5e-25
NP_073730 (OMIM: 616793) group IIF secretory phosp ( 211) 382 93.5 1.8e-19
XP_011540258 (OMIM: 616793) PREDICTED: group IIF s ( 211) 382 93.5 1.8e-19
NP_003552 (OMIM: 603603) group 10 secretory phosph ( 165) 344 85.0 5.1e-17
XP_011540257 (OMIM: 616793) PREDICTED: group IIF s ( 219) 309 77.2 1.4e-14
NP_000919 (OMIM: 172410) phospholipase A2 precurso ( 148) 262 66.6 1.5e-11
XP_011521000 (OMIM: 603603) PREDICTED: group 10 se ( 120) 249 63.7 9.6e-11
XP_011520999 (OMIM: 603603) PREDICTED: group 10 se ( 124) 249 63.7 9.8e-11
XP_011520998 (OMIM: 603603) PREDICTED: group 10 se ( 131) 249 63.7 1e-10
XP_011520997 (OMIM: 603603) PREDICTED: group 10 se ( 133) 249 63.7 1e-10
NP_001258743 (OMIM: 605630) group IID secretory ph ( 62) 202 53.0 8.1e-08
NP_001073868 (OMIM: 601658) otoconin-90 precursor ( 477) 212 55.8 8.7e-08
>>XP_011539892 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa)
initn: 1052 init1: 1052 opt: 1052 Z-score: 1281.0 bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
130
pF1KB6 NLRSYNPQYQYFPNILCS
::::::::::::::::::
XP_011 NLRSYNPQYQYFPNILCS
130
>>NP_000920 (OMIM: 228980,601192) calcium-dependent phos (138 aa)
initn: 1052 init1: 1052 opt: 1052 Z-score: 1281.0 bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
130
pF1KB6 NLRSYNPQYQYFPNILCS
::::::::::::::::::
NP_000 NLRSYNPQYQYFPNILCS
130
>>XP_005245950 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa)
initn: 1052 init1: 1052 opt: 1052 Z-score: 1281.0 bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
130
pF1KB6 NLRSYNPQYQYFPNILCS
::::::::::::::::::
XP_005 NLRSYNPQYQYFPNILCS
130
>>XP_011539894 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa)
initn: 1052 init1: 1052 opt: 1052 Z-score: 1281.0 bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
130
pF1KB6 NLRSYNPQYQYFPNILCS
::::::::::::::::::
XP_011 NLRSYNPQYQYFPNILCS
130
>>XP_011539890 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa)
initn: 1052 init1: 1052 opt: 1052 Z-score: 1281.0 bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
130
pF1KB6 NLRSYNPQYQYFPNILCS
::::::::::::::::::
XP_011 NLRSYNPQYQYFPNILCS
130
>>XP_011539891 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa)
initn: 1052 init1: 1052 opt: 1052 Z-score: 1281.0 bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
130
pF1KB6 NLRSYNPQYQYFPNILCS
::::::::::::::::::
XP_011 NLRSYNPQYQYFPNILCS
130
>>XP_011539889 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa)
initn: 1052 init1: 1052 opt: 1052 Z-score: 1281.0 bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
130
pF1KB6 NLRSYNPQYQYFPNILCS
::::::::::::::::::
XP_011 NLRSYNPQYQYFPNILCS
130
>>XP_011539893 (OMIM: 228980,601192) PREDICTED: calcium- (138 aa)
initn: 1052 init1: 1052 opt: 1052 Z-score: 1281.0 bits: 242.8 E(85289): 1.3e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)
10 20 30 40 50 60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
70 80 90 100 110 120
130
pF1KB6 NLRSYNPQYQYFPNILCS
::::::::::::::::::
XP_011 NLRSYNPQYQYFPNILCS
130
>>XP_005245948 (OMIM: 228980,601192) PREDICTED: calcium- (169 aa)
initn: 1052 init1: 1052 opt: 1052 Z-score: 1279.7 bits: 242.9 E(85289): 1.5e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:32-169)
10 20 30
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIE
::::::::::::::::::::::::::::::
XP_005 EVRTKRPRIGTDTNRPFVEEEIQMAIRTPEMKGLLPLAWFLACSVPAVQGGLLDLKSMIE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
70 80 90 100 110 120
100 110 120 130
pF1KB6 AWGVVTCEPGPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS
::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AWGVVTCEPGPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS
130 140 150 160
>>XP_011539888 (OMIM: 228980,601192) PREDICTED: calcium- (169 aa)
initn: 1052 init1: 1052 opt: 1052 Z-score: 1279.7 bits: 242.9 E(85289): 1.5e-64
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:32-169)
10 20 30
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIE
::::::::::::::::::::::::::::::
XP_011 EVRTKRPRIGTDTNRPFVEEEIQMAIRTPEMKGLLPLAWFLACSVPAVQGGLLDLKSMIE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB6 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
70 80 90 100 110 120
100 110 120 130
pF1KB6 AWGVVTCEPGPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AWGVVTCEPGPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS
130 140 150 160
138 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 23:41:38 2016 done: Fri Nov 4 23:41:39 2016
Total Scan time: 4.220 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]