Result of FASTA (ccds) for pFN21AB6734
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6734, 138 aa
  1>>>pF1KB6734 138 - 138 aa - 138 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1791+/-0.000647; mu= 11.7198+/- 0.039
 mean_var=68.1362+/-13.207, 0's: 0 Z-trim(111.9): 20  B-trim: 17 in 1/49
 Lambda= 0.155377
 statistics sampled from 12749 (12765) to 12749 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.769), E-opt: 0.2 (0.392), width:  16
 Scan time:  1.700

The best scores are:                                      opt bits E(32554)
CCDS202.1 PLA2G5 gene_id:5322|Hs108|chr1           ( 138) 1052 243.9 2.4e-65
CCDS203.1 PLA2G2D gene_id:26279|Hs108|chr1         ( 145)  473 114.1 2.9e-26
CCDS201.1 PLA2G2A gene_id:5320|Hs108|chr1          ( 144)  462 111.6 1.6e-25
CCDS200.1 PLA2G2E gene_id:30814|Hs108|chr1         ( 142)  428 104.0 3.1e-23
CCDS204.2 PLA2G2F gene_id:64600|Hs108|chr1         ( 211)  382 93.8 5.5e-20
CCDS10555.1 PLA2G10 gene_id:8399|Hs108|chr16       ( 165)  344 85.2 1.7e-17
CCDS9195.1 PLA2G1B gene_id:5319|Hs108|chr12        ( 148)  262 66.8 5.2e-12


>>CCDS202.1 PLA2G5 gene_id:5322|Hs108|chr1                (138 aa)
 initn: 1052 init1: 1052 opt: 1052  Z-score: 1286.6  bits: 243.9 E(32554): 2.4e-65
Smith-Waterman score: 1052; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138)

               10        20        30        40        50        60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130        
pF1KB6 NLRSYNPQYQYFPNILCS
       ::::::::::::::::::
CCDS20 NLRSYNPQYQYFPNILCS
              130        

>>CCDS203.1 PLA2G2D gene_id:26279|Hs108|chr1              (145 aa)
 initn: 463 init1: 343 opt: 473  Z-score: 584.9  bits: 114.1 E(32554): 2.9e-26
Smith-Waterman score: 473; 45.3% identity (75.0% similar) in 128 aa overlap (11-137:12-138)

                10        20        30        40        50         
pF1KB6  MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDG
                  .:  .: .:::.:.:..:...::::  . .:  :::.:: :::: :::.
CCDS20 MELALLCGLVVMAGVIP-IQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDA
               10         20        30        40        50         

      60        70        80        90        100       110        
pF1KB6 TDWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTC-EPGPFCHVNLCACDRKLVYCL
       ::::: .:: :: .:. .::.:  . :.: :. : . : . : .:. .:::::.....::
CCDS20 TDWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCL
      60        70        80        90       100       110         

      120       130              
pF1KB6 KRNLRSYNPQYQYFPNILCS      
       :::: .:. . ...    :       
CCDS20 KRNLDTYQKRLRFYWRPHCRGQTPGC
     120       130       140     

>>CCDS201.1 PLA2G2A gene_id:5320|Hs108|chr1               (144 aa)
 initn: 469 init1: 455 opt: 462  Z-score: 571.6  bits: 111.6 E(32554): 1.6e-25
Smith-Waterman score: 462; 45.3% identity (70.8% similar) in 137 aa overlap (1-137:1-137)

               10        20        30        40        50        60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
       :: :: :: ..  ..  ..:.:.... ::. .:::.:  .::::::.:: ::::.:::.:
CCDS20 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
       : :: .:: :: :::..::. .  :::.  . . .::     :. .:: ::.  . :. :
CCDS20 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
               70        80        90       100       110       120

              130              
pF1KB6 NLRSYNPQYQYFPNILCS      
       :  .:: .:::. :  :       
CCDS20 NKTTYNKKYQYYSNKHCRGSTPRC
              130       140    

>>CCDS200.1 PLA2G2E gene_id:30814|Hs108|chr1              (142 aa)
 initn: 445 init1: 358 opt: 428  Z-score: 530.5  bits: 104.0 E(32554): 3.1e-23
Smith-Waterman score: 428; 45.7% identity (66.7% similar) in 129 aa overlap (10-138:9-136)

               10        20        30        40        50        60
pF1KB6 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
                ::   :  : :.:...  ::::.:::.:: .:. :::::: ::   : : :
CCDS20  MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSAL-QYNDYGCYCGIGGSHWPVDQT
                10        20        30         40        50        

               70        80        90       100       110       120
pF1KB6 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
       :::: ::: ::::::. ::. . ..: .  .   . :     :.   : ::.. . :..:
CCDS20 DWCCHAHDCCYGRLEKLGCEPKLEKYLFSVSERGIFCAGRTTCQRLTCECDKRAALCFRR
       60        70        80        90       100       110        

              130              
pF1KB6 NLRSYNPQYQYFPNILCS      
       :: .:: .: ..:: ::.      
CCDS20 NLGTYNRKYAHYPNKLCTGPTPPC
      120       130       140  

>>CCDS204.2 PLA2G2F gene_id:64600|Hs108|chr1              (211 aa)
 initn: 380 init1: 305 opt: 382  Z-score: 472.3  bits: 93.8 E(32554): 5.5e-20
Smith-Waterman score: 382; 37.9% identity (66.4% similar) in 140 aa overlap (1-137:44-181)

                                             10        20        30
pF1KB6                               MKGLLPLAWFLACSVPAVQGGLLDLKSMIE
                                     :: .. .: . .  . ...:.::.::.:.:
CCDS20 KKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVE
            20        30        40        50        60        70   

               40        50        60        70        80        90
pF1KB6 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
        :::..:. ..  :::::: :::: ::: .:::: ::: :: .: ..::.  .. : . .
CCDS20 AVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTI
            80        90       100       110       120       130   

                 100       110       120       130                 
pF1KB6 AWGV-VTCEP--GPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS         
         .. ..:       :  . : ::...: ::    ..:  .:. : :. :          
CCDS20 ENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMN--QTYREEYRGFLNVYCQGPTPNCSIY
           140       150       160         170       180       190 

CCDS20 EPPPEEVTCSHQSPAPPAPP
             200       210 

>>CCDS10555.1 PLA2G10 gene_id:8399|Hs108|chr16            (165 aa)
 initn: 315 init1: 230 opt: 344  Z-score: 427.8  bits: 85.2 E(32554): 1.7e-17
Smith-Waterman score: 344; 39.8% identity (65.3% similar) in 118 aa overlap (21-137:43-157)

                         10        20        30        40        50
pF1KB6           MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGW
                                     :.:.: . .  : :  .   :  :::.:: 
CCDS10 LLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCV-GPRTPIAYMKYGCFCGL
             20        30        40        50         60        70 

               60        70        80        90       100          
pF1KB6 GGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPF-CHVNLCA
       ::.: :.:. :::: .:: :: : :: ::. .:. :... .   : : :.   :.  :: 
CCDS10 GGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGPAENKCQELLCK
              80        90       100       110       120       130 

     110       120       130               
pF1KB6 CDRKLVYCLKRNLRSYNPQYQYFPNILCS       
       ::.... :: ..   :: .: ..:..::        
CCDS10 CDQEIANCLAQT--EYNLKYLFYPQFLCEPDSPKCD
             140         150       160     

>>CCDS9195.1 PLA2G1B gene_id:5319|Hs108|chr12             (148 aa)
 initn: 209 init1: 181 opt: 262  Z-score: 329.2  bits: 66.8 E(32554): 5.2e-12
Smith-Waterman score: 262; 34.3% identity (62.2% similar) in 143 aa overlap (1-130:1-138)

               10        20             30         40        50    
pF1KB6 MKGLLPLAWFLACSVPAVQGGL-----LDLKSMIEKVT-GKNALTNYGFYGCYCGWGGRG
       :: :: :: .:  .: :...:.      ....::. :  :.. . .:. :::::: :: :
CCDS91 MK-LLVLAVLL--TVAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYCGLGGSG
                10          20        30        40        50       

           60        70              80        90        100       
pF1KB6 TPKDGTDWCCWAHDHCYGRLEE-KGC-----NIRTQSYKYRFAWGVVTCEP-GPFCHVNL
       :: :  : :: .::.:: . ..  .:     :  :..:.:  . ...::   .  :.. .
CCDS91 TPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNKECEAFI
        60        70        80        90       100       110       

       110       120       130          
pF1KB6 CACDRKLVYCLKRNLRSYNPQYQYFPNILCS  
       : :::. . :...    ::  ..          
CCDS91 CNCDRNAAICFSKA--PYNKAHKNLDTKKYCQS
       120       130         140        




138 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:41:38 2016 done: Fri Nov  4 23:41:38 2016
 Total Scan time:  1.700 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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