Result of FASTA (omim) for pFN21AE0104
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0104, 462 aa
  1>>>pF1KE0104 462 - 462 aa - 462 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.6052+/-0.000502; mu= 11.0166+/- 0.030
 mean_var=176.5434+/-36.686, 0's: 0 Z-trim(113.6): 199  B-trim: 325 in 2/52
 Lambda= 0.096527
 statistics sampled from 22693 (22976) to 22693 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.269), width:  16
 Scan time:  9.320

The best scores are:                                      opt bits E(85289)
XP_005272152 (OMIM: 609232) PREDICTED: peroxisomal ( 462) 3134 449.7 7.8e-126
NP_113626 (OMIM: 609232) peroxisomal NADH pyrophos ( 462) 3134 449.7 7.8e-126
XP_005272154 (OMIM: 609232) PREDICTED: peroxisomal ( 444) 2689 387.7 3.4e-107
NP_001287670 (OMIM: 609232) peroxisomal NADH pyrop ( 444) 2689 387.7 3.4e-107
NP_001269945 (OMIM: 609233) nucleoside diphosphate ( 226)  388 66.9 6.4e-11
NP_056985 (OMIM: 609233) nucleoside diphosphate-li ( 352)  388 67.1 8.5e-11
NP_001269948 (OMIM: 609233) nucleoside diphosphate ( 155)  351 61.6 1.8e-09
NP_001269946 (OMIM: 609233) nucleoside diphosphate ( 155)  351 61.6 1.8e-09


>>XP_005272152 (OMIM: 609232) PREDICTED: peroxisomal NAD  (462 aa)
 initn: 3134 init1: 3134 opt: 3134  Z-score: 2380.1  bits: 449.7 E(85289): 7.8e-126
Smith-Waterman score: 3134; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462)

               10        20        30        40        50        60
pF1KE0 MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALMYAARNGHPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALMYAARNGHPE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 IVQFLLEKGCDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IVQFLLEKGCDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 FSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 YTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 KQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 LCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 ETIEDAVRREVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ETIEDAVRREVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDAR
              370       380       390       400       410       420

              430       440       450       460  
pF1KE0 WFTREQVLDVLTKGKQQAFFVPPSRAIAHQLIKHWIRINPNL
       ::::::::::::::::::::::::::::::::::::::::::
XP_005 WFTREQVLDVLTKGKQQAFFVPPSRAIAHQLIKHWIRINPNL
              430       440       450       460  

>>NP_113626 (OMIM: 609232) peroxisomal NADH pyrophosphat  (462 aa)
 initn: 3134 init1: 3134 opt: 3134  Z-score: 2380.1  bits: 449.7 E(85289): 7.8e-126
Smith-Waterman score: 3134; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462)

               10        20        30        40        50        60
pF1KE0 MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALMYAARNGHPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALMYAARNGHPE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 IVQFLLEKGCDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 IVQFLLEKGCDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 FSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 FSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 YTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 YTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 KQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 KQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 LCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 LCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 ETIEDAVRREVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 ETIEDAVRREVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDAR
              370       380       390       400       410       420

              430       440       450       460  
pF1KE0 WFTREQVLDVLTKGKQQAFFVPPSRAIAHQLIKHWIRINPNL
       ::::::::::::::::::::::::::::::::::::::::::
NP_113 WFTREQVLDVLTKGKQQAFFVPPSRAIAHQLIKHWIRINPNL
              430       440       450       460  

>>XP_005272154 (OMIM: 609232) PREDICTED: peroxisomal NAD  (444 aa)
 initn: 2999 init1: 2689 opt: 2689  Z-score: 2045.4  bits: 387.7 E(85289): 3.4e-107
Smith-Waterman score: 2967; 96.1% identity (96.1% similar) in 462 aa overlap (1-462:1-444)

               10        20        30        40        50        60
pF1KE0 MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALMYAARNGHPE
       :::::::::::::::::::::::::::::::::::::::::::::::::::         
XP_005 MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALM---------
               10        20        30        40        50          

               70        80        90       100       110       120
pF1KE0 IVQFLLEKGCDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENY
                :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ---------CDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENY
                       60        70        80        90       100  

              130       140       150       160       170       180
pF1KE0 FSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLN
            110       120       130       140       150       160  

              190       200       210       220       230       240
pF1KE0 YTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEF
            170       180       190       200       210       220  

              250       260       270       280       290       300
pF1KE0 KQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKR
            230       240       250       260       270       280  

              310       320       330       340       350       360
pF1KE0 LCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPG
            290       300       310       320       330       340  

              370       380       390       400       410       420
pF1KE0 ETIEDAVRREVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ETIEDAVRREVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDAR
            350       360       370       380       390       400  

              430       440       450       460  
pF1KE0 WFTREQVLDVLTKGKQQAFFVPPSRAIAHQLIKHWIRINPNL
       ::::::::::::::::::::::::::::::::::::::::::
XP_005 WFTREQVLDVLTKGKQQAFFVPPSRAIAHQLIKHWIRINPNL
            410       420       430       440    

>>NP_001287670 (OMIM: 609232) peroxisomal NADH pyrophosp  (444 aa)
 initn: 2999 init1: 2689 opt: 2689  Z-score: 2045.4  bits: 387.7 E(85289): 3.4e-107
Smith-Waterman score: 2967; 96.1% identity (96.1% similar) in 462 aa overlap (1-462:1-444)

               10        20        30        40        50        60
pF1KE0 MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALMYAARNGHPE
       :::::::::::::::::::::::::::::::::::::::::::::::::::         
NP_001 MSSVKRSLKQEIVTQFHCSAAEGDIAKLTGILSHSPSLLNETSENGWTALM---------
               10        20        30        40        50          

               70        80        90       100       110       120
pF1KE0 IVQFLLEKGCDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENY
                :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ---------CDRSIVNKSRQTALDIAVFWGYKHIANLLATAKGGKKPWFLTNEVEECENY
                       60        70        80        90       100  

              130       140       150       160       170       180
pF1KE0 FSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQPEVRLCQLN
            110       120       130       140       150       160  

              190       200       210       220       230       240
pF1KE0 YTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFALGIDPIAAEEF
            170       180       190       200       210       220  

              250       260       270       280       290       300
pF1KE0 KQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKR
            230       240       250       260       270       280  

              310       320       330       340       350       360
pF1KE0 LCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPG
            290       300       310       320       330       340  

              370       380       390       400       410       420
pF1KE0 ETIEDAVRREVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETIEDAVRREVEEESGVKVGHVQYVACQPWPMPSSLMIGCLALAVSTEIKVDKNEIEDAR
            350       360       370       380       390       400  

              430       440       450       460  
pF1KE0 WFTREQVLDVLTKGKQQAFFVPPSRAIAHQLIKHWIRINPNL
       ::::::::::::::::::::::::::::::::::::::::::
NP_001 WFTREQVLDVLTKGKQQAFFVPPSRAIAHQLIKHWIRINPNL
            410       420       430       440    

>>NP_001269945 (OMIM: 609233) nucleoside diphosphate-lin  (226 aa)
 initn: 556 init1: 263 opt: 388  Z-score: 317.0  bits: 66.9 E(85289): 6.4e-11
Smith-Waterman score: 557; 44.3% identity (70.8% similar) in 212 aa overlap (256-456:15-216)

         230       240       250       260       270       280     
pF1KE0 AWFALGIDPIAAEEFKQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCP
                                     ::.::. ..:.... :...: ::. ..:: 
NP_001                 METELKGSFIELRKALFQLNARDASLLSTAQALLRWHDAHQFCS
                               10        20        30        40    

         290       300       310       320       330       340     
pF1KE0 TCGNATKIEEGGYKRLCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRF
         :. :: . .: ::.:     :: : ..   ::.. ::.:  :   :::.:::.::. :
NP_001 RSGQPTKKNVAGSKRVC-----PSNNIIY---YPQMAPVAITLV--SDGTRCLLARQSSF
           50        60                70        80          90    

         350       360       370       380       390        400    
pF1KE0 PPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGHVQYVACQPWPMPS-SLMIGCLALA
       : ::.. :::: . ::..:...:::: :: :..:  .:: : : ::.:: ::::.: : .
NP_001 PKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYASQHWPFPSGSLMIACHATV
          100       110       120       130       140       150    

            410       420       430               440       450    
pF1KE0 V--STEIKVDKNEIEDARWFTREQVLDVLT-KG---KQQA----FFVPPSRAIAHQLIKH
          .:::.:.  :.: : ::....:  .:  ::   .::     :..::. ::.:::::.
NP_001 KPGQTEIQVNLRELETAAWFSHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQLIKE
          160       170       180       190       200       210    

          460      
pF1KE0 WIRINPNL    
       :.          
NP_001 WVEKQTCSSLPA
          220      

>>NP_056985 (OMIM: 609233) nucleoside diphosphate-linked  (352 aa)
 initn: 562 init1: 263 opt: 388  Z-score: 314.8  bits: 67.1 E(85289): 8.5e-11
Smith-Waterman score: 577; 36.8% identity (62.0% similar) in 334 aa overlap (142-456:41-342)

             120       130       140       150       160       170 
pF1KE0 NEVEECENYFSKTLLDRKSEKRNNSDWLLAKESHPATVFILFSDLNPLVTLGGNKESFQQ
                                     :... . .: :: .: ::.  ....  .  
NP_056 RKFFWCYRLLSTYVTKTRYLFELKEDDDACKKAQQTGAFYLFHSLAPLLQTSAHQ--YLA
               20        30        40        50        60          

             180       190       200       210       220       230 
pF1KE0 PEVRLCQLNYTDIKDYLAQPEKITLIFLGVELEIKDKLLNYAGEVPREEEDGLVAWFAL-
       :.  : .:            :..   :     .:.:..:   :   ..:     ::::: 
NP_056 PRHSLLEL------------ERLLGKFGQDAQRIEDSVL--IGCSEQQE-----AWFALD
       70                    80        90         100              

                  240          250       260       270       280   
pF1KE0 -GIDP---IAAEEFKQRHENCY---FLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKF
        :.:    :.:   : . :.     :..    ::.::. ..:.... :...: ::. ..:
NP_056 LGLDSSFSISASLHKPEMETELKGSFIEL-RKALFQLNARDASLLSTAQALLRWHDAHQF
     110       120       130        140       150       160        

           290       300       310       320       330       340   
pF1KE0 CPTCGNATKIEEGGYKRLCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQK
       :   :. :: . .: ::.:     :: : ..   ::.. ::.:  :   :::.:::.::.
NP_056 CSRSGQPTKKNVAGSKRVC-----PSNNIIY---YPQMAPVAITLV--SDGTRCLLARQS
      170       180            190          200         210        

           350       360       370       380       390        400  
pF1KE0 RFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGHVQYVACQPWPMPS-SLMIGCLA
        :: ::.. :::: . ::..:...:::: :: :..:  .:: : : ::.:: ::::.: :
NP_056 SFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYASQHWPFPSGSLMIACHA
      220       230       240       250       260       270        

              410       420       430               440       450  
pF1KE0 LAV--STEIKVDKNEIEDARWFTREQVLDVLT-KG---KQQA----FFVPPSRAIAHQLI
        .   .:::.:.  :.: : ::....:  .:  ::   .::     :..::. ::.::::
NP_056 TVKPGQTEIQVNLRELETAAWFSHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQLI
      280       290       300       310       320       330        

            460      
pF1KE0 KHWIRINPNL    
       :.:.          
NP_056 KEWVEKQTCSSLPA
      340       350  

>>NP_001269948 (OMIM: 609233) nucleoside diphosphate-lin  (155 aa)
 initn: 390 init1: 263 opt: 351  Z-score: 291.0  bits: 61.6 E(85289): 1.8e-09
Smith-Waterman score: 420; 49.0% identity (72.4% similar) in 145 aa overlap (323-456:3-145)

            300       310       320       330       340       350  
pF1KE0 IEEGGYKRLCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTC
                                     ::.:  :   :::.:::.::. :: ::.. 
NP_001                             MAPVAITLV--SDGTRCLLARQSSFPKGMYSA
                                             10        20        30

            360       370       380       390        400           
pF1KE0 LAGFIEPGETIEDAVRREVEEESGVKVGHVQYVACQPWPMPS-SLMIGCLALAV--STEI
       :::: . ::..:...:::: :: :..:  .:: : : ::.:: ::::.: : .   .:::
NP_001 LAGFCDIGESVEETIRREVAEEVGLEVESLQYYASQHWPFPSGSLMIACHATVKPGQTEI
               40        50        60        70        80        90

     410       420       430               440       450       460 
pF1KE0 KVDKNEIEDARWFTREQVLDVLT-KG---KQQA----FFVPPSRAIAHQLIKHWIRINPN
       .:.  :.: : ::....:  .:  ::   .::     :..::. ::.:::::.:.     
NP_001 QVNLRELETAAWFSHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQLIKEWVEKQTC
              100       110       120       130       140       150

            
pF1KE0 L    
            
NP_001 SSLPA
            

>>NP_001269946 (OMIM: 609233) nucleoside diphosphate-lin  (155 aa)
 initn: 390 init1: 263 opt: 351  Z-score: 291.0  bits: 61.6 E(85289): 1.8e-09
Smith-Waterman score: 420; 49.0% identity (72.4% similar) in 145 aa overlap (323-456:3-145)

            300       310       320       330       340       350  
pF1KE0 IEEGGYKRLCLKEDCPSLNGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTC
                                     ::.:  :   :::.:::.::. :: ::.. 
NP_001                             MAPVAITLV--SDGTRCLLARQSSFPKGMYSA
                                             10        20        30

            360       370       380       390        400           
pF1KE0 LAGFIEPGETIEDAVRREVEEESGVKVGHVQYVACQPWPMPS-SLMIGCLALAV--STEI
       :::: . ::..:...:::: :: :..:  .:: : : ::.:: ::::.: : .   .:::
NP_001 LAGFCDIGESVEETIRREVAEEVGLEVESLQYYASQHWPFPSGSLMIACHATVKPGQTEI
               40        50        60        70        80        90

     410       420       430               440       450       460 
pF1KE0 KVDKNEIEDARWFTREQVLDVLT-KG---KQQA----FFVPPSRAIAHQLIKHWIRINPN
       .:.  :.: : ::....:  .:  ::   .::     :..::. ::.:::::.:.     
NP_001 QVNLRELETAAWFSHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQLIKEWVEKQTC
              100       110       120       130       140       150

            
pF1KE0 L    
            
NP_001 SSLPA
            




462 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 03:04:46 2016 done: Fri Nov  4 03:04:47 2016
 Total Scan time:  9.320 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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