Result of FASTA (omim) for pFN21AB7952
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7952, 394 aa
  1>>>pF1KB7952 394 - 394 aa - 394 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.8180+/-0.000499; mu= 12.0135+/- 0.031
 mean_var=291.7401+/-61.314, 0's: 0 Z-trim(116.9): 1881  B-trim: 123 in 1/53
 Lambda= 0.075089
 statistics sampled from 26180 (28417) to 26180 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.333), width:  16
 Scan time:  7.790

The best scores are:                                      opt bits E(85289)
XP_016866756 (OMIM: 602246) PREDICTED: zinc finger ( 394) 2761 313.0 7.7e-85
NP_001186409 (OMIM: 602246) zinc finger and SCAN d ( 394) 2761 313.0 7.7e-85
NP_006290 (OMIM: 602246) zinc finger and SCAN doma ( 394) 2761 313.0 7.7e-85
XP_011513180 (OMIM: 602246) PREDICTED: zinc finger ( 526) 2761 313.3 8.9e-85
NP_001186408 (OMIM: 602246) zinc finger and SCAN d ( 445) 1481 174.5 4.5e-43
XP_011513178 (OMIM: 602246) PREDICTED: zinc finger ( 577) 1481 174.7 5.1e-43
XP_011513177 (OMIM: 602246) PREDICTED: zinc finger ( 583) 1481 174.7 5.2e-43
XP_011513111 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_011513110 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_005249353 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_011513114 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_011513113 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_011513115 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
NP_112161 (OMIM: 610794) zinc finger and SCAN doma ( 406) 1228 147.0 7.7e-35
NP_001230170 (OMIM: 610794) zinc finger and SCAN d ( 406) 1228 147.0 7.7e-35
NP_665916 (OMIM: 610794) zinc finger and SCAN doma ( 406) 1228 147.0 7.7e-35
XP_005249352 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_016866685 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
XP_011513109 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1228 147.0 7.7e-35
NP_001128688 (OMIM: 610794) zinc finger and SCAN d ( 406) 1228 147.0 7.7e-35
NP_001128687 (OMIM: 610794) zinc finger and SCAN d ( 406) 1228 147.0 7.7e-35
XP_005258398 (OMIM: 194534) PREDICTED: zinc finger ( 368) 1061 128.8   2e-29
NP_008896 (OMIM: 194534) zinc finger protein 24 is ( 368) 1061 128.8   2e-29
NP_001309215 (OMIM: 609600) zinc finger protein 39 ( 335)  904 111.8 2.6e-24
XP_016881176 (OMIM: 609600) PREDICTED: zinc finger ( 335)  904 111.8 2.6e-24
NP_001309219 (OMIM: 609600) zinc finger protein 39 ( 335)  904 111.8 2.6e-24
XP_016881177 (OMIM: 609600) PREDICTED: zinc finger ( 335)  904 111.8 2.6e-24
XP_006722495 (OMIM: 609600) PREDICTED: zinc finger ( 335)  904 111.8 2.6e-24
NP_001307884 (OMIM: 616463) zinc finger protein 23 ( 416)  903 111.8 3.1e-24
XP_016880511 (OMIM: 616463) PREDICTED: zinc finger ( 368)  887 110.0 9.6e-24
NP_665699 (OMIM: 609600) zinc finger protein 396 i ( 333)  809 101.5 3.2e-21
NP_001265050 (OMIM: 602240) zinc finger protein wi ( 391)  800 100.6 6.8e-21
XP_011513175 (OMIM: 602240) PREDICTED: zinc finger ( 391)  800 100.6 6.8e-21
NP_001265051 (OMIM: 602240) zinc finger protein wi ( 391)  800 100.6 6.8e-21
XP_011513176 (OMIM: 602240) PREDICTED: zinc finger ( 391)  800 100.6 6.8e-21
XP_011513172 (OMIM: 602240) PREDICTED: zinc finger ( 578)  800 100.9 8.3e-21
NP_006289 (OMIM: 602240) zinc finger protein with  ( 578)  800 100.9 8.3e-21
NP_001265048 (OMIM: 602240) zinc finger protein wi ( 578)  800 100.9 8.3e-21
XP_016866755 (OMIM: 602240) PREDICTED: zinc finger ( 578)  800 100.9 8.3e-21
NP_001291435 (OMIM: 611643) zinc finger protein wi ( 390)  750 95.2 2.9e-19
XP_016866333 (OMIM: 611643) PREDICTED: zinc finger ( 390)  750 95.2 2.9e-19
XP_011512891 (OMIM: 611643) PREDICTED: zinc finger ( 390)  750 95.2 2.9e-19
XP_006715158 (OMIM: 611643) PREDICTED: zinc finger ( 408)  750 95.2   3e-19
XP_005249157 (OMIM: 611643) PREDICTED: zinc finger ( 418)  750 95.2   3e-19
XP_005249155 (OMIM: 611643) PREDICTED: zinc finger ( 442)  750 95.3 3.1e-19
XP_005249154 (OMIM: 611643) PREDICTED: zinc finger ( 442)  750 95.3 3.1e-19
XP_011512890 (OMIM: 611643) PREDICTED: zinc finger ( 516)  750 95.4 3.4e-19
NP_061983 (OMIM: 611643) zinc finger protein with  ( 545)  750 95.4 3.4e-19
XP_005249152 (OMIM: 611643) PREDICTED: zinc finger ( 545)  750 95.4 3.4e-19
XP_006715281 (OMIM: 612791) PREDICTED: zinc finger ( 390)  744 94.5 4.6e-19


>>XP_016866756 (OMIM: 602246) PREDICTED: zinc finger and  (394 aa)
 initn: 2761 init1: 2761 opt: 2761  Z-score: 1644.2  bits: 313.0 E(85289): 7.7e-85
Smith-Waterman score: 2761; 100.0% identity (100.0% similar) in 394 aa overlap (1-394:1-394)

               10        20        30        40        50        60
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
              310       320       330       340       350       360

              370       380       390    
pF1KB7 TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
       ::::::::::::::::::::::::::::::::::
XP_016 TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
              370       380       390    

>>NP_001186409 (OMIM: 602246) zinc finger and SCAN domai  (394 aa)
 initn: 2761 init1: 2761 opt: 2761  Z-score: 1644.2  bits: 313.0 E(85289): 7.7e-85
Smith-Waterman score: 2761; 100.0% identity (100.0% similar) in 394 aa overlap (1-394:1-394)

               10        20        30        40        50        60
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
              310       320       330       340       350       360

              370       380       390    
pF1KB7 TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
       ::::::::::::::::::::::::::::::::::
NP_001 TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
              370       380       390    

>>NP_006290 (OMIM: 602246) zinc finger and SCAN domain-c  (394 aa)
 initn: 2761 init1: 2761 opt: 2761  Z-score: 1644.2  bits: 313.0 E(85289): 7.7e-85
Smith-Waterman score: 2761; 100.0% identity (100.0% similar) in 394 aa overlap (1-394:1-394)

               10        20        30        40        50        60
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 IERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSH
              310       320       330       340       350       360

              370       380       390    
pF1KB7 TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
       ::::::::::::::::::::::::::::::::::
NP_006 TGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
              370       380       390    

>>XP_011513180 (OMIM: 602246) PREDICTED: zinc finger and  (526 aa)
 initn: 2761 init1: 2761 opt: 2761  Z-score: 1643.0  bits: 313.3 E(85289): 8.9e-85
Smith-Waterman score: 2761; 100.0% identity (100.0% similar) in 394 aa overlap (1-394:133-526)

                                             10        20        30
pF1KB7                               MNTNSKEVLSLGVQVPEAWEELLTMKVEAK
                                     ::::::::::::::::::::::::::::::
XP_011 TPMGFRQAPPRFVLKHSSSWRVPFKLFKVKMNTNSKEVLSLGVQVPEAWEELLTMKVEAK
            110       120       130       140       150       160  

               40        50        60        70        80        90
pF1KB7 SHLQWQESRLKRSNPLAREIFRRHFRQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHLQWQESRLKRSNPLAREIFRRHFRQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQ
            170       180       190       200       210       220  

              100       110       120       130       140       150
pF1KB7 ILDLLVLEQFLSILPKELQGWVREHCPESGEEAVILLEDLERELDEPQHEMVAHRHRQEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ILDLLVLEQFLSILPKELQGWVREHCPESGEEAVILLEDLERELDEPQHEMVAHRHRQEV
            230       240       250       260       270       280  

              160       170       180       190       200       210
pF1KB7 LCKEMVPLAEQTPLTLQSQPKEPQLTCDSAQKCHSIGETDEVTKTEDRELVLRKDCPKIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LCKEMVPLAEQTPLTLQSQPKEPQLTCDSAQKCHSIGETDEVTKTEDRELVLRKDCPKIV
            290       300       310       320       330       340  

              220       230       240       250       260       270
pF1KB7 EPHGKMFNEQTWEVSQQDPSHGEVGEHKDRIERQWGNLLGEGQHKCDECGKSFTQSSGLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EPHGKMFNEQTWEVSQQDPSHGEVGEHKDRIERQWGNLLGEGQHKCDECGKSFTQSSGLI
            350       360       370       380       390       400  

              280       290       300       310       320       330
pF1KB7 RHQRIHTGERPYECNECGKAFSRSSGLFNHRGIHNIQKRYHCKECGKVFSQSAGLIQHQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RHQRIHTGERPYECNECGKAFSRSSGLFNHRGIHNIQKRYHCKECGKVFSQSAGLIQHQR
            410       420       430       440       450       460  

              340       350       360       370       380       390
pF1KB7 IHKGEKPYQCSQCSKSYSRRSFLIEHQRSHTGERPHQCIECGKSFNRHCNLIRHQKIHTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHKGEKPYQCSQCSKSYSRRSFLIEHQRSHTGERPHQCIECGKSFNRHCNLIRHQKIHTV
            470       480       490       500       510       520  

           
pF1KB7 AELV
       ::::
XP_011 AELV
           

>>NP_001186408 (OMIM: 602246) zinc finger and SCAN domai  (445 aa)
 initn: 1723 init1: 1476 opt: 1481  Z-score: 894.3  bits: 174.5 E(85289): 4.5e-43
Smith-Waterman score: 2525; 88.0% identity (88.0% similar) in 426 aa overlap (20-394:20-445)

               10        20        30        40        50        60
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
                          :::::::::::::::::::::::::::::::::::::::::
NP_001 MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHFRQLCY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPESG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQLTCDSA
              130       140       150       160       170       180

              190                                                  
pF1KB7 QKCHSIGETD--------------------------------------------------
       ::::::::::                                                  
NP_001 QKCHSIGETDLIRSLRRRAVLIPLGAHLFSTDTFLFSKPVVIPQLKGGGETWPNNRGVLR
              190       200       210       220       230       240

               200       210       220       230       240         
pF1KB7 -EVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDRIERQWGNLL
        :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHKDRIERQWGNLL
              250       260       270       280       290       300

     250       260       270       280       290       300         
pF1KB7 GEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNHRGIHNIQKR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLFNHRGIHNIQKR
              310       320       330       340       350       360

     310       320       330       340       350       360         
pF1KB7 YHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSHTGERPHQCI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQRSHTGERPHQCI
              370       380       390       400       410       420

     370       380       390    
pF1KB7 ECGKSFNRHCNLIRHQKIHTVAELV
       :::::::::::::::::::::::::
NP_001 ECGKSFNRHCNLIRHQKIHTVAELV
              430       440     

>>XP_011513178 (OMIM: 602246) PREDICTED: zinc finger and  (577 aa)
 initn: 1723 init1: 1476 opt: 1481  Z-score: 893.2  bits: 174.7 E(85289): 5.1e-43
Smith-Waterman score: 2525; 88.0% identity (88.0% similar) in 426 aa overlap (20-394:152-577)

                          10        20        30        40         
pF1KB7            MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLARE
                                     ::::::::::::::::::::::::::::::
XP_011 WRVPFKLFKVKMNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLARE
             130       140       150       160       170       180 

      50        60        70        80        90       100         
pF1KB7 IFRRHFRQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IFRRHFRQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQ
             190       200       210       220       230       240 

     110       120       130       140       150       160         
pF1KB7 GWVREHCPESGEEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GWVREHCPESGEEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQ
             250       260       270       280       290       300 

     170       180       190                                       
pF1KB7 PKEPQLTCDSAQKCHSIGETD---------------------------------------
       :::::::::::::::::::::                                       
XP_011 PKEPQLTCDSAQKCHSIGETDLIRSLRRRAVLIPLGAHLFSTDTFLFSKPVVIPQLKGGG
             310       320       330       340       350       360 

                          200       210       220       230        
pF1KB7 ------------EVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHK
                   ::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETWPNNRGVLRDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHK
             370       380       390       400       410       420 

      240       250       260       270       280       290        
pF1KB7 DRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLF
             430       440       450       460       470       480 

      300       310       320       330       340       350        
pF1KB7 NHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQR
             490       500       510       520       530       540 

      360       370       380       390    
pF1KB7 SHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
       ::::::::::::::::::::::::::::::::::::
XP_011 SHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
             550       560       570       

>>XP_011513177 (OMIM: 602246) PREDICTED: zinc finger and  (583 aa)
 initn: 2747 init1: 1476 opt: 1481  Z-score: 893.2  bits: 174.7 E(85289): 5.2e-43
Smith-Waterman score: 2479; 86.6% identity (86.6% similar) in 426 aa overlap (26-394:158-583)

                    10        20        30        40        50     
pF1KB7      MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHF
                                     ::::::::::::::::::::::::::::::
XP_011 LFKVKMNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNPLAREIFRRHF
       130       140       150       160       170       180       

          60        70        80        90       100       110     
pF1KB7 RQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREH
       190       200       210       220       230       240       

         120       130       140       150       160       170     
pF1KB7 CPESGEEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPESGEEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTPLTLQSQPKEPQL
       250       260       270       280       290       300       

         180                                                       
pF1KB7 TCDSAQKCHSIGET----------------------------------------------
       ::::::::::::::                                              
XP_011 TCDSAQKCHSIGETAPLWISDLIRSLRRRAVLIPLGAHLFSTDTFLFSKPVVIPQLKGGG
       310       320       330       340       350       360       

                190       200       210       220       230        
pF1KB7 -----------DEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHK
                  :::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETWPNNRGVLRDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVGEHK
       370       380       390       400       410       420       

      240       250       260       270       280       290        
pF1KB7 DRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSSGLF
       430       440       450       460       470       480       

      300       310       320       330       340       350        
pF1KB7 NHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIEHQR
       490       500       510       520       530       540       

      360       370       380       390    
pF1KB7 SHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
       ::::::::::::::::::::::::::::::::::::
XP_011 SHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV
       550       560       570       580   

>>XP_011513111 (OMIM: 610794) PREDICTED: zinc finger and  (406 aa)
 initn: 1147 init1: 662 opt: 1228  Z-score: 746.5  bits: 147.0 E(85289): 7.7e-35
Smith-Waterman score: 1228; 51.2% identity (75.7% similar) in 375 aa overlap (20-389:5-374)

               10        20         30         40        50        
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMK-VEAKSHLQW-QESRLKRSNPLAREIFRRHFRQL
                          ::   .: :...    : ::..:. .:  ..:  :. :::.
XP_011                MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQF
                              10        20        30        40     

       60        70        80        90       100       110        
pF1KB7 CYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPE
       ::::::::::::.::.:::.:::::.. ::::::.::::::::.:::.:::.::::: ::
XP_011 CYQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPE
          50        60        70        80        90       100     

      120       130       140        150        160       170      
pF1KB7 SGEEAVILLEDLERELDEPQHEMVAHRH-RQEVLCKEMVPL-AEQTPLTLQSQPKEPQLT
       :::::: ..::::.::.:: ..   :.: ..::: ...  : ..: :  .: ::   :: 
XP_011 SGEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLR
         110       120       130       140       150       160     

        180        190       200       210       220       230     
pF1KB7 CDSAQKC-HSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVG
        .:   : :.. : :  .  :..::. ...  : .:  :   ..   .::  : .. :. 
XP_011 YESF--CLHQFQEQDGESIPENQELASKQEILKEMEHLGD--SKLQRDVSL-DSKYRETC
           170       180       190       200         210        220

         240       250       260       270       280       290     
pF1KB7 EHKDRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSS
       .. .. :.: ..  :: .:.:.:::::::.:: ::.::::::::.::::.:::::::: :
XP_011 KRDSKAEKQQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRS
              230       240       250       260       270       280

         300       310       320       330       340       350     
pF1KB7 GLFNHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIE
       .: .::  :. .: :.::::::.:: : :: .:.::: :::::.:. :.:..   : :..
XP_011 SLNEHRRSHTGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQ
              290       300       310       320       330       340

         360       370       380       390                         
pF1KB7 HQRSHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV                     
       ::: ::::. .:: ::::.: .. .:..: ..::                          
XP_011 HQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKI
              350       360       370       380       390       400

XP_011 HTGERP
             

>>XP_011513110 (OMIM: 610794) PREDICTED: zinc finger and  (406 aa)
 initn: 1147 init1: 662 opt: 1228  Z-score: 746.5  bits: 147.0 E(85289): 7.7e-35
Smith-Waterman score: 1228; 51.2% identity (75.7% similar) in 375 aa overlap (20-389:5-374)

               10        20         30         40        50        
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMK-VEAKSHLQW-QESRLKRSNPLAREIFRRHFRQL
                          ::   .: :...    : ::..:. .:  ..:  :. :::.
XP_011                MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQF
                              10        20        30        40     

       60        70        80        90       100       110        
pF1KB7 CYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPE
       ::::::::::::.::.:::.:::::.. ::::::.::::::::.:::.:::.::::: ::
XP_011 CYQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPE
          50        60        70        80        90       100     

      120       130       140        150        160       170      
pF1KB7 SGEEAVILLEDLERELDEPQHEMVAHRH-RQEVLCKEMVPL-AEQTPLTLQSQPKEPQLT
       :::::: ..::::.::.:: ..   :.: ..::: ...  : ..: :  .: ::   :: 
XP_011 SGEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLR
         110       120       130       140       150       160     

        180        190       200       210       220       230     
pF1KB7 CDSAQKC-HSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVG
        .:   : :.. : :  .  :..::. ...  : .:  :   ..   .::  : .. :. 
XP_011 YESF--CLHQFQEQDGESIPENQELASKQEILKEMEHLGD--SKLQRDVSL-DSKYRETC
           170       180       190       200         210        220

         240       250       260       270       280       290     
pF1KB7 EHKDRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSS
       .. .. :.: ..  :: .:.:.:::::::.:: ::.::::::::.::::.:::::::: :
XP_011 KRDSKAEKQQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRS
              230       240       250       260       270       280

         300       310       320       330       340       350     
pF1KB7 GLFNHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIE
       .: .::  :. .: :.::::::.:: : :: .:.::: :::::.:. :.:..   : :..
XP_011 SLNEHRRSHTGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQ
              290       300       310       320       330       340

         360       370       380       390                         
pF1KB7 HQRSHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV                     
       ::: ::::. .:: ::::.: .. .:..: ..::                          
XP_011 HQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKI
              350       360       370       380       390       400

XP_011 HTGERP
             

>>XP_005249353 (OMIM: 610794) PREDICTED: zinc finger and  (406 aa)
 initn: 1147 init1: 662 opt: 1228  Z-score: 746.5  bits: 147.0 E(85289): 7.7e-35
Smith-Waterman score: 1228; 51.2% identity (75.7% similar) in 375 aa overlap (20-389:5-374)

               10        20         30         40        50        
pF1KB7 MNTNSKEVLSLGVQVPEAWEELLTMK-VEAKSHLQW-QESRLKRSNPLAREIFRRHFRQL
                          ::   .: :...    : ::..:. .:  ..:  :. :::.
XP_005                MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQF
                              10        20        30        40     

       60        70        80        90       100       110        
pF1KB7 CYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSILPKELQGWVREHCPE
       ::::::::::::.::.:::.:::::.. ::::::.::::::::.:::.:::.::::: ::
XP_005 CYQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPE
          50        60        70        80        90       100     

      120       130       140        150        160       170      
pF1KB7 SGEEAVILLEDLERELDEPQHEMVAHRH-RQEVLCKEMVPL-AEQTPLTLQSQPKEPQLT
       :::::: ..::::.::.:: ..   :.: ..::: ...  : ..: :  .: ::   :: 
XP_005 SGEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLR
         110       120       130       140       150       160     

        180        190       200       210       220       230     
pF1KB7 CDSAQKC-HSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTWEVSQQDPSHGEVG
        .:   : :.. : :  .  :..::. ...  : .:  :   ..   .::  : .. :. 
XP_005 YESF--CLHQFQEQDGESIPENQELASKQEILKEMEHLGD--SKLQRDVSL-DSKYRETC
           170       180       190       200         210        220

         240       250       260       270       280       290     
pF1KB7 EHKDRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERPYECNECGKAFSRSS
       .. .. :.: ..  :: .:.:.:::::::.:: ::.::::::::.::::.:::::::: :
XP_005 KRDSKAEKQQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRS
              230       240       250       260       270       280

         300       310       320       330       340       350     
pF1KB7 GLFNHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQCSQCSKSYSRRSFLIE
       .: .::  :. .: :.::::::.:: : :: .:.::: :::::.:. :.:..   : :..
XP_005 SLNEHRRSHTGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQ
              290       300       310       320       330       340

         360       370       380       390                         
pF1KB7 HQRSHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV                     
       ::: ::::. .:: ::::.: .. .:..: ..::                          
XP_005 HQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKI
              350       360       370       380       390       400

XP_005 HTGERP
             




394 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 19:50:07 2016 done: Sat Nov  5 19:50:08 2016
 Total Scan time:  7.790 Total Display time:  0.070

Function used was FASTA [36.3.4 Apr, 2011]
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