(Linear) (Six-base) MAPSORT of: KIBB5387.seq Check: 4714 from: 1 to: 1629 KIBB5387.orf With 182 enzymes: SgfI * April 24, 2009 13:04 .. AfeI AGC'GCT Cuts at: 0 1519 1629 Size: 1519 110 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 1616 1629 Size: 1616 13 AlwNI CAG_nnn'CTG Cuts at: 0 642 1629 Size: 642 987 ApaI G_GGCC'C Cuts at: 0 771 1629 Size: 771 858 ApaLI G'TGCA_C Cuts at: 0 1090 1629 Size: 1090 539 ApoI r'AATT_y Cuts at: 0 163 1629 Size: 163 1466 AvaI C'yCGr_G Cuts at: 0 569 1629 Size: 569 1060 BamHI G'GATC_C Cuts at: 0 615 1629 Size: 615 1014 BanI G'GyrC_C Cuts at: 0 201 663 1188 1629 Size: 201 462 525 441 Fragments arranged by size: 525 462 441 201 BanII G_rGCy'C Cuts at: 0 151 428 697 771 1583 1629 Size: 151 277 269 74 812 46 Fragments arranged by size: 812 277 269 151 74 46 BbeI G_GCGC'C Cuts at: 0 667 1629 Size: 667 962 BbvCI CC'TCA_GC Cuts at: 0 442 824 1629 Size: 442 382 805 Fragments arranged by size: 805 442 382 BclI T'GATC_A Cuts at: 0 80 195 1629 Size: 80 115 1434 Fragments arranged by size: 1434 115 80 Bme1580I G_kGCm'C Cuts at: 0 91 771 1094 1629 Size: 91 680 323 535 Fragments arranged by size: 680 535 323 91 BmgBI CAC'GTC Cuts at: 0 282 1324 1629 Size: 282 1042 305 Fragments arranged by size: 1042 305 282 BmrI ACTGGGnnnn_n' Cuts at: 0 329 1113 1542 1629 Size: 329 784 429 87 Fragments arranged by size: 784 429 329 87 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 135 293 440 994 1629 Size: 135 158 147 554 635 Fragments arranged by size: 635 554 158 147 135 Bpu10I CC'TnA_GC Cuts at: 0 117 442 824 1629 Size: 117 325 382 805 Fragments arranged by size: 805 382 325 117 BsaI GGTCTCn'nnnn_ Cuts at: 0 34 269 1431 1482 1629 Size: 34 235 1162 51 147 Fragments arranged by size: 1162 235 147 51 34 BsaAI yAC'GTr Cuts at: 0 1227 1629 Size: 1227 402 BsaHI Gr'CG_yC Cuts at: 0 664 1629 Size: 664 965 BsaWI w'CCGG_w Cuts at: 0 1496 1629 Size: 1496 133 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 266 296 521 551 1629 Size: 266 30 225 30 1078 Fragments arranged by size: 1078 266 225 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 451 472 557 687 1012 1591 1629 Size: 451 21 85 130 325 579 38 Fragments arranged by size: 579 451 325 130 85 38 21 BseYI C'CCAG_C Cuts at: 0 266 1073 1629 Size: 266 807 556 Fragments arranged by size: 807 556 266 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 983 1629 Size: 983 646 BsiEI CG_ry'CG Cuts at: 0 834 1050 1629 Size: 834 216 579 Fragments arranged by size: 834 579 216 BsiHKAI G_wGCw'C Cuts at: 0 428 1094 1583 1629 Size: 428 666 489 46 Fragments arranged by size: 666 489 428 46 BsmI GAATG_Cn' Cuts at: 0 890 1629 Size: 890 739 Bsp1286I G_dGCh'C Cuts at: 0 91 151 428 697 771 1094 1583 1629 Size: 91 60 277 269 74 323 489 46 Fragments arranged by size: 489 323 277 269 91 74 60 46 BspHI T'CATG_A Cuts at: 0 1145 1629 Size: 1145 484 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 1002 1584 1629 Size: 1002 582 45 Fragments arranged by size: 1002 582 45 BsrBI CCG'CTC Cuts at: 0 116 1629 Size: 116 1513 BsrDI GCAATG_nn' Cuts at: 0 875 1629 Size: 875 754 BsrFI r'CCGG_y Cuts at: 0 886 1040 1103 1629 Size: 886 154 63 526 Fragments arranged by size: 886 526 154 63 BssSI C'ACGA_G Cuts at: 0 847 1529 1629 Size: 847 682 100 Fragments arranged by size: 847 682 100 BstXI CCAn_nnnn'nTGG Cuts at: 0 1317 1629 Size: 1317 312 BstYI r'GATC_y Cuts at: 0 615 1629 Size: 615 1014 Bsu36I CC'TnA_GG Cuts at: 0 699 1629 Size: 699 930 BtgI C'CryG_G Cuts at: 0 1184 1629 Size: 1184 445 BtsI GCAGTG_nn' Cuts at: 0 529 1000 1310 1629 Size: 529 471 310 319 Fragments arranged by size: 529 471 319 310 EaeI y'GGCC_r Cuts at: 0 8 626 1629 Size: 8 618 1003 Fragments arranged by size: 1003 618 8 EarI CTCTTCn'nnn_ Cuts at: 0 1406 1629 Size: 1406 223 EcoICRI GAG'CTC Cuts at: 0 426 1581 1629 Size: 426 1155 48 Fragments arranged by size: 1155 426 48 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 135 293 440 994 1629 Size: 135 158 147 554 635 Fragments arranged by size: 635 554 158 147 135 EcoO109I rG'GnC_Cy Cuts at: 0 767 768 1629 Size: 767 1 861 Fragments arranged by size: 861 767 1 FspI TGC'GCA Cuts at: 0 316 1629 Size: 316 1313 HaeII r_GCGC'y Cuts at: 0 667 954 1521 1629 Size: 667 287 567 108 Fragments arranged by size: 667 567 287 108 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 45 77 266 298 394 426 600 632 Size: 45 32 189 32 96 32 174 32 Cuts at: 632 1629 Size: 997 Fragments arranged by size: 997 189 174 96 45 32 32 32 32 KasI G'GCGC_C Cuts at: 0 663 1629 Size: 663 966 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 351 1629 Size: 351 1278 MscI TGG'CCA Cuts at: 0 10 628 1629 Size: 10 618 1001 Fragments arranged by size: 1001 618 10 MslI CAynn'nnrTG Cuts at: 0 70 515 1162 1629 Size: 70 445 647 467 Fragments arranged by size: 647 467 445 70 MspA1I CmG'CkG Cuts at: 0 721 914 1629 Size: 721 193 715 Fragments arranged by size: 721 715 193 NaeI GCC'GGC Cuts at: 0 888 1105 1629 Size: 888 217 524 Fragments arranged by size: 888 524 217 NarI GG'CG_CC Cuts at: 0 664 1629 Size: 664 965 NcoI C'CATG_G Cuts at: 0 1184 1629 Size: 1184 445 NgoMIV G'CCGG_C Cuts at: 0 886 1103 1629 Size: 886 217 526 Fragments arranged by size: 886 526 217 PfoI T'CCnGG_A Cuts at: 0 167 1606 1629 Size: 167 1439 23 Fragments arranged by size: 1439 167 23 PspOMI G'GGCC_C Cuts at: 0 767 1629 Size: 767 862 PspXI vC'TCGA_Gb Cuts at: 0 569 1629 Size: 569 1060 PstI C_TGCA'G Cuts at: 0 140 1629 Size: 140 1489 PvuII CAG'CTG Cuts at: 0 721 1629 Size: 721 908 SacI G_AGCT'C Cuts at: 0 428 1583 1629 Size: 428 1155 46 Fragments arranged by size: 1155 428 46 SfcI C'TryA_G Cuts at: 0 136 1629 Size: 136 1493 SfoI GGC'GCC Cuts at: 0 665 1629 Size: 665 964 SmlI C'TyrA_G Cuts at: 0 569 1629 Size: 569 1060 StyI C'CwwG_G Cuts at: 0 881 1184 1629 Size: 881 303 445 Fragments arranged by size: 881 445 303 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 1064 1629 Size: 1064 565 TatI w'GTAC_w Cuts at: 0 677 1629 Size: 677 952 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 521 553 1629 Size: 521 32 1076 Fragments arranged by size: 1076 521 32 Tth111I GACn'n_nGTC Cuts at: 0 280 1629 Size: 280 1349 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 1377 1629 Size: 1377 252 XhoI C'TCGA_G Cuts at: 0 569 1629 Size: 569 1060 Enzymes that do cut: AfeI AlfI AlwNI ApaI ApaLI ApoI AvaI BamHI BanI BanII BbeI BbvCI BclI Bme1580I BmgBI BmrI BpmI Bpu10I BsaI BsaAI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI Bsp1286I BspHI BspMI BsrBI BsrDI BsrFI BssSI BstXI BstYI Bsu36I BtgI BtsI EaeI EarI EcoICRI Eco57MI EcoO109I FspI HaeII Hin4I KasI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV PfoI PspOMI PspXI PstI PvuII SacI SfcI SfoI SmlI StyI TaqII TatI TstI Tth111I XcmI XhoI Enzymes that do not cut: AarI AatII AccI Acc65I AclI AcuI AflII AflIII AgeI AhdI AleI AloI AscI AseI AsiSI AvrII BaeI BbsI BcgI BciVI BfrBI BglI BglII BlpI BmtI BplI BpuEI BsaBI BsiWI BsmBI BspEI BsrGI BssHII BstAPI BstBI BstEII BstZ17I BtgZI ClaI CspCI DraI DraIII DrdI EagI EciI EcoNI EcoRI EcoRV FalI FseI FspAI HincII HindIII HpaI KpnI MfeI MluI NdeI NheI NotI NruI NsiI NspI PacI PasI PciI PflMI PmeI PmlI PpiI PpuMI PshAI PsiI PsrI PvuI RsrII SacII SalI SanDI SapI SbfI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI SspI StuI SwaI XbaI XmaI XmnI ZraI