FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8971, 362 aa 1>>>pF1KB8971 362 - 362 aa - 362 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.0150+/-0.000304; mu= 25.3502+/- 0.019 mean_var=97.2683+/-22.775, 0's: 0 Z-trim(117.8): 565 B-trim: 1555 in 1/53 Lambda= 0.130043 statistics sampled from 29409 (30108) to 29409 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.353), width: 16 Scan time: 9.220 The best scores are: opt bits E(85289) NP_057686 (OMIM: 600240) C-C chemokine receptor ty ( 362) 2364 453.7 3e-127 NP_001495 (OMIM: 300574) C-X-C chemokine receptor ( 368) 735 148.0 3.1e-35 XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378) 735 148.1 3.1e-35 XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415) 735 148.1 3.3e-35 NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415) 735 148.1 3.3e-35 NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372) 734 147.9 3.5e-35 NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372) 734 147.9 3.5e-35 NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372) 734 147.9 3.5e-35 NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378) 734 147.9 3.6e-35 NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315) 689 139.3 1.1e-32 NP_057641 (OMIM: 606065) atypical chemokine recept ( 350) 681 137.9 3.4e-32 NP_848540 (OMIM: 606065) atypical chemokine recept ( 350) 681 137.9 3.4e-32 NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357) 661 134.1 4.6e-31 NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357) 661 134.1 4.6e-31 NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369) 661 134.2 4.7e-31 XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369) 661 134.2 4.7e-31 NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374) 650 132.1 2e-30 NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374) 650 132.1 2e-30 NP_001707 (OMIM: 601613) C-X-C chemokine receptor ( 372) 621 126.7 8.5e-29 NP_116743 (OMIM: 601613) C-X-C chemokine receptor ( 327) 603 123.2 8.3e-28 NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352) 586 120.1 7.8e-27 NP_000570 (OMIM: 601373,609532,610379,612522) C-C ( 352) 586 120.1 7.8e-27 NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 581 119.1 1.5e-26 NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352) 571 117.2 5.5e-26 NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356) 571 117.3 5.5e-26 NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 568 116.7 8.2e-26 XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 568 116.7 8.2e-26 NP_001287 (OMIM: 602648) atypical chemokine recept ( 384) 567 116.6 9.7e-26 NP_001548 (OMIM: 146928) C-X-C chemokine receptor ( 360) 562 115.6 1.8e-25 XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 562 115.6 1.8e-25 XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 562 115.6 1.8e-25 XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 562 115.6 1.8e-25 NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360) 562 115.6 1.8e-25 XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 562 115.6 1.8e-25 NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355) 552 113.7 6.5e-25 XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 552 113.7 6.5e-25 NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355) 552 113.7 6.5e-25 XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 552 113.7 6.5e-25 NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373) 552 113.7 6.7e-25 NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376) 552 113.7 6.7e-25 XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 552 113.8 7.1e-25 XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 552 113.8 7.1e-25 XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360) 550 113.3 8.6e-25 NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360) 550 113.3 8.6e-25 NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374) 548 113.0 1.1e-24 NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350) 542 111.8 2.4e-24 NP_001328 (OMIM: 601470,607339,609423,613784) CX3C ( 355) 499 103.7 6.4e-22 NP_001164643 (OMIM: 601470,607339,609423,613784) C ( 355) 499 103.7 6.4e-22 NP_001164642 (OMIM: 601470,607339,609423,613784) C ( 355) 499 103.7 6.4e-22 NP_001164645 (OMIM: 601470,607339,609423,613784) C ( 387) 499 103.8 6.7e-22 >>NP_057686 (OMIM: 600240) C-C chemokine receptor type 1 (362 aa) initn: 2364 init1: 2364 opt: 2364 Z-score: 2405.4 bits: 453.7 E(85289): 3e-127 Smith-Waterman score: 2364; 100.0% identity (100.0% similar) in 362 aa overlap (1-362:1-362) 10 20 30 40 50 60 pF1KB8 MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAFQPSVSLTVAALGLAGNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAFQPSVSLTVAALGLAGNG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 LVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGALQGWSLGSATCRTISGLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 LVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGALQGWSLGSATCRTISGLY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 SASFHAGFLFLACISADRYVAIARALPAGPRPSTPGRAHLVSVIVWLLSLLLALPALLFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 SASFHAGFLFLACISADRYVAIARALPAGPRPSTPGRAHLVSVIVWLLSLLLALPALLFS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 QDGQREGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLGVMVACYALLGRTLLAARGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 QDGQREGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLGVMVACYALLGRTLLAARGP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 ERRRALRVVVALVAAFVVLQLPYSLALLLDTADLLAARERSCPASKRKDVALLVTSGLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 ERRRALRVVVALVAAFVVLQLPYSLALLLDTADLLAARERSCPASKRKDVALLVTSGLAL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB8 ARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRRGCPRRPRLSSCSAPTETHSLSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 ARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRRGCPRRPRLSSCSAPTETHSLSW 310 320 330 340 350 360 pF1KB8 DN :: NP_057 DN >>NP_001495 (OMIM: 300574) C-X-C chemokine receptor type (368 aa) initn: 638 init1: 345 opt: 735 Z-score: 753.6 bits: 148.0 E(85289): 3.1e-35 Smith-Waterman score: 735; 41.1% identity (65.4% similar) in 350 aa overlap (14-360:29-365) 10 20 30 40 pF1KB8 MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAFQP :. .: :. . : : : . :.::: : NP_001 MVLEVSDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSP-P--CPQDFSLNFDRAFLP 10 20 30 40 50 50 60 70 80 90 100 pF1KB8 SVSLTVAALGLAGNGLVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGALQG .. . ::: ::: : :. : .::.: : :.. ::.::.:: ::.::::. :. : NP_001 ALYSLLFLLGLLGNGAVAAV-LLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQ 60 70 80 90 100 110 110 120 130 140 150 160 pF1KB8 WSLGSATCRTISGLYSASFHAGFLFLACISADRYVAIARALPAGPRPSTPGRAHLVSVIV : .::. :.. ..:.. .:.:: :.::::: :::. :..: : . :.:. :. . : NP_001 WVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLY-RRGPPARVTLTCLAV 120 130 140 150 160 170 170 180 190 200 210 220 pF1KB8 WLLSLLLALPALLF--SQDGQREGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLGVM : : ::.::: ..: .. .: . .:. :: :. . : : :.. :: ::: :: NP_001 WGLCLLFALPDFIFLSAHHDERLNATHCQYNFP----QVGRTALRVLQLVAGFLLPLLVM 180 190 200 210 220 230 230 240 250 260 270 280 pF1KB8 VACYALLGRTLLAARGPERRRALRVVVALVAAFVVLQLPYSLALLLDTADLLAARERSCP . ::: . .::..:: .: ::.:.::..:.::.. :: :..:.: :.: :.: NP_001 AYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCG 240 250 260 270 280 290 290 300 310 320 330 340 pF1KB8 ASKRKDVALLVTSGLALARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRRGCPRR .: ::: :::::. .: :::.::::.:..::. . :: .::. .:: :. NP_001 RESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLGCPN----QRGLQRQ 300 310 320 330 340 350 360 pF1KB8 PRLSSC-SAPTETHSLSWDN : : :. .:: :. NP_001 PSSSRRDSSWSETSEASYSGL 350 360 >>XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemokine (378 aa) initn: 616 init1: 345 opt: 735 Z-score: 753.5 bits: 148.1 E(85289): 3.1e-35 Smith-Waterman score: 735; 41.1% identity (65.4% similar) in 350 aa overlap (14-360:39-375) 10 20 30 40 pF1KB8 MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAF :. .: :. . : : : . :.::: XP_005 GSPQGWVSDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSP-P--CPQDFSLNFDRAF 10 20 30 40 50 60 50 60 70 80 90 100 pF1KB8 QPSVSLTVAALGLAGNGLVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGAL :.. . ::: ::: : :. : .::.: : :.. ::.::.:: ::.::::. :. : XP_005 LPALYSLLFLLGLLGNGAVAAV-LLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAA 70 80 90 100 110 120 110 120 130 140 150 160 pF1KB8 QGWSLGSATCRTISGLYSASFHAGFLFLACISADRYVAIARALPAGPRPSTPGRAHLVSV : .::. :.. ..:.. .:.:: :.::::: :::. :..: : . :.:. :. . XP_005 VQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLY-RRGPPARVTLTCL 130 140 150 160 170 180 170 180 190 200 210 220 pF1KB8 IVWLLSLLLALPALLF--SQDGQREGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLG :: : ::.::: ..: .. .: . .:. :: :. . : : :.. :: ::: XP_005 AVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFP----QVGRTALRVLQLVAGFLLPLL 190 200 210 220 230 230 240 250 260 270 280 pF1KB8 VMVACYALLGRTLLAARGPERRRALRVVVALVAAFVVLQLPYSLALLLDTADLLAARERS ::. ::: . .::..:: .: ::.:.::..:.::.. :: :..:.: :.: :. XP_005 VMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARN 240 250 260 270 280 290 290 300 310 320 330 340 pF1KB8 CPASKRKDVALLVTSGLALARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRRGCP : .: ::: :::::. .: :::.::::.:..::. . :: .::. .:: XP_005 CGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLGCPN----QRGLQ 300 310 320 330 340 350 350 360 pF1KB8 RRPRLSSC-SAPTETHSLSWDN :.: : :. .:: :. XP_005 RQPSSSRRDSSWSETSEASYSGL 360 370 >>XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemokine (415 aa) initn: 616 init1: 345 opt: 735 Z-score: 753.1 bits: 148.1 E(85289): 3.3e-35 Smith-Waterman score: 735; 41.1% identity (65.4% similar) in 350 aa overlap (14-360:76-412) 10 20 30 40 pF1KB8 MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAF :. .: :. . : : : . :.::: XP_016 PFPPSQVSDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSP-P--CPQDFSLNFDRAF 50 60 70 80 90 100 50 60 70 80 90 100 pF1KB8 QPSVSLTVAALGLAGNGLVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGAL :.. . ::: ::: : :. : .::.: : :.. ::.::.:: ::.::::. :. : XP_016 LPALYSLLFLLGLLGNGAVAAV-LLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAA 110 120 130 140 150 160 110 120 130 140 150 160 pF1KB8 QGWSLGSATCRTISGLYSASFHAGFLFLACISADRYVAIARALPAGPRPSTPGRAHLVSV : .::. :.. ..:.. .:.:: :.::::: :::. :..: : . :.:. :. . XP_016 VQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLY-RRGPPARVTLTCL 170 180 190 200 210 220 170 180 190 200 210 220 pF1KB8 IVWLLSLLLALPALLF--SQDGQREGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLG :: : ::.::: ..: .. .: . .:. :: :. . : : :.. :: ::: XP_016 AVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFP----QVGRTALRVLQLVAGFLLPLL 230 240 250 260 270 230 240 250 260 270 280 pF1KB8 VMVACYALLGRTLLAARGPERRRALRVVVALVAAFVVLQLPYSLALLLDTADLLAARERS ::. ::: . .::..:: .: ::.:.::..:.::.. :: :..:.: :.: :. XP_016 VMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARN 280 290 300 310 320 330 290 300 310 320 330 340 pF1KB8 CPASKRKDVALLVTSGLALARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRRGCP : .: ::: :::::. .: :::.::::.:..::. . :: .::. .:: XP_016 CGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLGCPN----QRGLQ 340 350 360 370 380 390 350 360 pF1KB8 RRPRLSSC-SAPTETHSLSWDN :.: : :. .:: :. XP_016 RQPSSSRRDSSWSETSEASYSGL 400 410 >>NP_001136269 (OMIM: 300574) C-X-C chemokine receptor t (415 aa) initn: 616 init1: 345 opt: 735 Z-score: 753.1 bits: 148.1 E(85289): 3.3e-35 Smith-Waterman score: 735; 41.1% identity (65.4% similar) in 350 aa overlap (14-360:76-412) 10 20 30 40 pF1KB8 MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAF :. .: :. . : : : . :.::: NP_001 PFPPSQVSDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSP-P--CPQDFSLNFDRAF 50 60 70 80 90 100 50 60 70 80 90 100 pF1KB8 QPSVSLTVAALGLAGNGLVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGAL :.. . ::: ::: : :. : .::.: : :.. ::.::.:: ::.::::. :. : NP_001 LPALYSLLFLLGLLGNGAVAAV-LLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAA 110 120 130 140 150 160 110 120 130 140 150 160 pF1KB8 QGWSLGSATCRTISGLYSASFHAGFLFLACISADRYVAIARALPAGPRPSTPGRAHLVSV : .::. :.. ..:.. .:.:: :.::::: :::. :..: : . :.:. :. . NP_001 VQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLY-RRGPPARVTLTCL 170 180 190 200 210 220 170 180 190 200 210 220 pF1KB8 IVWLLSLLLALPALLF--SQDGQREGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLG :: : ::.::: ..: .. .: . .:. :: :. . : : :.. :: ::: NP_001 AVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFP----QVGRTALRVLQLVAGFLLPLL 230 240 250 260 270 230 240 250 260 270 280 pF1KB8 VMVACYALLGRTLLAARGPERRRALRVVVALVAAFVVLQLPYSLALLLDTADLLAARERS ::. ::: . .::..:: .: ::.:.::..:.::.. :: :..:.: :.: :. NP_001 VMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARN 280 290 300 310 320 330 290 300 310 320 330 340 pF1KB8 CPASKRKDVALLVTSGLALARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRRGCP : .: ::: :::::. .: :::.::::.:..::. . :: .::. .:: NP_001 CGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLGCPN----QRGLQ 340 350 360 370 380 390 350 360 pF1KB8 RRPRLSSC-SAPTETHSLSWDN :.: : :. .:: :. NP_001 RQPSSSRRDSSWSETSEASYSGL 400 410 >>NP_001288646 (OMIM: 600242) C-C chemokine receptor typ (372 aa) initn: 589 init1: 505 opt: 734 Z-score: 752.6 bits: 147.9 E(85289): 3.5e-35 Smith-Waterman score: 734; 41.0% identity (67.8% similar) in 332 aa overlap (30-355:41-366) 10 20 30 40 50 pF1KB8 MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAFQPSVSLTVAALGLAGN :: : ::. :. : : . . .:: :: NP_001 VIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLGN 20 30 40 50 60 70 60 70 80 90 100 110 pF1KB8 GLVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGALQGWSLGSATCRTISGL :::. :.. .: .. :...::.::.::.:. ::::: : .: ..: .: :. : .. NP_001 GLVVLTYIYFKRL-KTMTDTYLLNLAVADILFLLTLPFWAYSAAKSWVFGVHFCKLIFAI 80 90 100 110 120 120 130 140 150 160 170 pF1KB8 YSASFHAGFLFLACISADRYVAIARALPAG-PRPSTPGRAHLVSVIVWLLSLLLALPALL :. :: .:.:.: ::: ::::::..:. : : . ..: : .:.:. .:..: :: NP_001 YKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGIWILATVLSIPELL 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB8 FSQDGQR---EGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLGVMVACYALLGRTLL .: : :: : :: :: : . . . :::...:: .:: .: :: .. :::: NP_001 YS-DLQRSSSEQAMRCSLI-TEHVEAFI--TIQVAQMVIGFLVPLLAMSFCYLVIIRTLL 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB8 AARGPERRRALRVVVALVAAFVVLQLPYSLALLLDTADLLAARERSCPASKRKDVALLVT ::. :: .:..:..:.:..:.:.::::. ..: .:. . .: ::. ..: :: NP_001 QARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCELSKQLNIAYDVT 250 260 270 280 290 300 300 310 320 330 340 350 pF1KB8 SGLALARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRR--GCPRRPRLSSCSAPT .:: .:: .:: ::::.:..::.:: .:.. .: : : :. .: :. : :: :. . NP_001 YSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSC-RHIRRSSMSVEA 310 320 330 340 350 360 360 pF1KB8 ETHSLSWDN :: NP_001 ETTTTFSP 370 >>NP_001288645 (OMIM: 600242) C-C chemokine receptor typ (372 aa) initn: 589 init1: 505 opt: 734 Z-score: 752.6 bits: 147.9 E(85289): 3.5e-35 Smith-Waterman score: 734; 41.0% identity (67.8% similar) in 332 aa overlap (30-355:41-366) 10 20 30 40 50 pF1KB8 MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAFQPSVSLTVAALGLAGN :: : ::. :. : : . . .:: :: NP_001 VIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLGN 20 30 40 50 60 70 60 70 80 90 100 110 pF1KB8 GLVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGALQGWSLGSATCRTISGL :::. :.. .: .. :...::.::.::.:. ::::: : .: ..: .: :. : .. NP_001 GLVVLTYIYFKRL-KTMTDTYLLNLAVADILFLLTLPFWAYSAAKSWVFGVHFCKLIFAI 80 90 100 110 120 120 130 140 150 160 170 pF1KB8 YSASFHAGFLFLACISADRYVAIARALPAG-PRPSTPGRAHLVSVIVWLLSLLLALPALL :. :: .:.:.: ::: ::::::..:. : : . ..: : .:.:. .:..: :: NP_001 YKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGIWILATVLSIPELL 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB8 FSQDGQR---EGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLGVMVACYALLGRTLL .: : :: : :: :: : . . . :::...:: .:: .: :: .. :::: NP_001 YS-DLQRSSSEQAMRCSLI-TEHVEAFI--TIQVAQMVIGFLVPLLAMSFCYLVIIRTLL 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB8 AARGPERRRALRVVVALVAAFVVLQLPYSLALLLDTADLLAARERSCPASKRKDVALLVT ::. :: .:..:..:.:..:.:.::::. ..: .:. . .: ::. ..: :: NP_001 QARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCELSKQLNIAYDVT 250 260 270 280 290 300 300 310 320 330 340 350 pF1KB8 SGLALARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRR--GCPRRPRLSSCSAPT .:: .:: .:: ::::.:..::.:: .:.. .: : : :. .: :. : :: :. . NP_001 YSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSC-RHIRRSSMSVEA 310 320 330 340 350 360 360 pF1KB8 ETHSLSWDN :: NP_001 ETTTTFSP 370 >>NP_001288647 (OMIM: 600242) C-C chemokine receptor typ (372 aa) initn: 589 init1: 505 opt: 734 Z-score: 752.6 bits: 147.9 E(85289): 3.5e-35 Smith-Waterman score: 734; 41.0% identity (67.8% similar) in 332 aa overlap (30-355:41-366) 10 20 30 40 50 pF1KB8 MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAFQPSVSLTVAALGLAGN :: : ::. :. : : . . .:: :: NP_001 VIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLGN 20 30 40 50 60 70 60 70 80 90 100 110 pF1KB8 GLVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGALQGWSLGSATCRTISGL :::. :.. .: .. :...::.::.::.:. ::::: : .: ..: .: :. : .. NP_001 GLVVLTYIYFKRL-KTMTDTYLLNLAVADILFLLTLPFWAYSAAKSWVFGVHFCKLIFAI 80 90 100 110 120 120 130 140 150 160 170 pF1KB8 YSASFHAGFLFLACISADRYVAIARALPAG-PRPSTPGRAHLVSVIVWLLSLLLALPALL :. :: .:.:.: ::: ::::::..:. : : . ..: : .:.:. .:..: :: NP_001 YKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGIWILATVLSIPELL 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB8 FSQDGQR---EGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLGVMVACYALLGRTLL .: : :: : :: :: : . . . :::...:: .:: .: :: .. :::: NP_001 YS-DLQRSSSEQAMRCSLI-TEHVEAFI--TIQVAQMVIGFLVPLLAMSFCYLVIIRTLL 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB8 AARGPERRRALRVVVALVAAFVVLQLPYSLALLLDTADLLAARERSCPASKRKDVALLVT ::. :: .:..:..:.:..:.:.::::. ..: .:. . .: ::. ..: :: NP_001 QARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCELSKQLNIAYDVT 250 260 270 280 290 300 300 310 320 330 340 350 pF1KB8 SGLALARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRR--GCPRRPRLSSCSAPT .:: .:: .:: ::::.:..::.:: .:.. .: : : :. .: :. : :: :. . NP_001 YSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSC-RHIRRSSMSVEA 310 320 330 340 350 360 360 pF1KB8 ETHSLSWDN :: NP_001 ETTTTFSP 370 >>NP_001829 (OMIM: 600242) C-C chemokine receptor type 7 (378 aa) initn: 589 init1: 505 opt: 734 Z-score: 752.5 bits: 147.9 E(85289): 3.6e-35 Smith-Waterman score: 734; 41.0% identity (67.8% similar) in 332 aa overlap (30-355:47-372) 10 20 30 40 50 pF1KB8 MGTEATEQVSWGHYSGDEEDAYSAEPLPELCYKADVQAFSRAFQPSVSLTVAALGLAGN :: : ::. :. : : . . .:: :: NP_001 VIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLGN 20 30 40 50 60 70 60 70 80 90 100 110 pF1KB8 GLVLATHLAARRAARSPTSAHLLQLALADLLLALTLPFAAAGALQGWSLGSATCRTISGL :::. :.. .: .. :...::.::.::.:. ::::: : .: ..: .: :. : .. NP_001 GLVVLTYIYFKRL-KTMTDTYLLNLAVADILFLLTLPFWAYSAAKSWVFGVHFCKLIFAI 80 90 100 110 120 130 120 130 140 150 160 170 pF1KB8 YSASFHAGFLFLACISADRYVAIARALPAG-PRPSTPGRAHLVSVIVWLLSLLLALPALL :. :: .:.:.: ::: ::::::..:. : : . ..: : .:.:. .:..: :: NP_001 YKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGIWILATVLSIPELL 140 150 160 170 180 190 180 190 200 210 220 230 pF1KB8 FSQDGQR---EGQRRCRLIFPEGLTQTVKGASAVAQVALGFALPLGVMVACYALLGRTLL .: : :: : :: :: : . . . :::...:: .:: .: :: .. :::: NP_001 YS-DLQRSSSEQAMRCSLI-TEHVEAFI--TIQVAQMVIGFLVPLLAMSFCYLVIIRTLL 200 210 220 230 240 250 240 250 260 270 280 290 pF1KB8 AARGPERRRALRVVVALVAAFVVLQLPYSLALLLDTADLLAARERSCPASKRKDVALLVT ::. :: .:..:..:.:..:.:.::::. ..: .:. . .: ::. ..: :: NP_001 QARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCELSKQLNIAYDVT 260 270 280 290 300 310 300 310 320 330 340 350 pF1KB8 SGLALARCGLNPVLYAFLGLRFRQDLRRLLRGGSCPSGPQPRR--GCPRRPRLSSCSAPT .:: .:: .:: ::::.:..::.:: .:.. .: : : :. .: :. : :: :. . NP_001 YSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSC-RHIRRSSMSVEA 320 330 340 350 360 370 360 pF1KB8 ETHSLSWDN :: NP_001 ETTTTFSP >>NP_001288643 (OMIM: 600242) C-C chemokine receptor typ (315 aa) initn: 563 init1: 505 opt: 689 Z-score: 707.6 bits: 139.3 E(85289): 1.1e-32 Smith-Waterman score: 689; 41.6% identity (69.2% similar) in 308 aa overlap (54-355:8-309) 30 40 50 60 70 80 pF1KB8 AEPLPELCYKADVQAFSRAFQPSVSLTVAALGLAGNGLVLATHLAARRAARSPTSAHLLQ .:: :::::. :.. .: .. :...::. NP_001 MYSIICFVGLLGNGLVVLTYIYFKRL-KTMTDTYLLN 10 20 30 90 100 110 120 130 140 pF1KB8 LALADLLLALTLPFAAAGALQGWSLGSATCRTISGLYSASFHAGFLFLACISADRYVAIA ::.::.:. ::::: : .: ..: .: :. : ..:. :: .:.:.: ::: ::::::. NP_001 LAVADILFLLTLPFWAYSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIV 40 50 60 70 80 90 150 160 170 180 190 pF1KB8 RALPAG-PRPSTPGRAHLVSVIVWLLSLLLALPALLFSQDGQR---EGQRRCRLIFPEGL .:. : : . ..: : .:.:. .:..: ::.: : :: : :: :: : . NP_001 QAVSAHRHRARVLLISKLSCVGIWILATVLSIPELLYS-DLQRSSSEQAMRCSLI-TEHV 100 110 120 130 140 150 200 210 220 230 240 250 pF1KB8 TQTVKGASAVAQVALGFALPLGVMVACYALLGRTLLAARGPERRRALRVVVALVAAFVVL . . :::...:: .:: .: :: .. :::: ::. :: .:..:..:.:..:.:. NP_001 EAFI--TIQVAQMVIGFLVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVF 160 170 180 190 200 210 260 270 280 290 300 310 pF1KB8 QLPYSLALLLDTADLLAARERSCPASKRKDVALLVTSGLALARCGLNPVLYAFLGLRFRQ ::::. ..: .:. . .: ::. ..: :: .:: .:: .:: ::::.:..::. NP_001 QLPYNGVVLAQTVANFNITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRN 220 230 240 250 260 270 320 330 340 350 360 pF1KB8 DLRRLLRGGSCPSGPQPRR--GCPRRPRLSSCSAPTETHSLSWDN :: .:.. .: : : :. .: :. : :: :. .:: NP_001 DLFKLFKDLGCLSQEQLRQWSSC-RHIRRSSMSVEAETTTTFSP 280 290 300 310 362 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 03:54:50 2016 done: Mon Nov 7 03:54:51 2016 Total Scan time: 9.220 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]