FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0359, 582 aa 1>>>pF1KE0359 582 - 582 aa - 582 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.1173+/-0.00086; mu= 12.6706+/- 0.052 mean_var=142.3601+/-28.764, 0's: 0 Z-trim(112.7): 30 B-trim: 331 in 1/49 Lambda= 0.107493 statistics sampled from 13388 (13416) to 13388 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.412), width: 16 Scan time: 3.800 The best scores are: opt bits E(32554) CCDS43493.2 HDAC2 gene_id:3066|Hs108|chr6 ( 488) 3343 529.9 2.9e-150 CCDS360.1 HDAC1 gene_id:3065|Hs108|chr1 ( 482) 2880 458.1 1.2e-128 CCDS4264.1 HDAC3 gene_id:8841|Hs108|chr5 ( 428) 1833 295.6 8.1e-80 CCDS14420.1 HDAC8 gene_id:55869|Hs108|chrX ( 377) 1089 180.2 4e-45 CCDS55449.1 HDAC8 gene_id:55869|Hs108|chrX ( 286) 821 138.6 1e-32 CCDS55451.1 HDAC8 gene_id:55869|Hs108|chrX ( 256) 721 123.0 4.5e-28 CCDS14306.1 HDAC6 gene_id:10013|Hs108|chrX (1215) 389 72.1 4.7e-12 CCDS83163.1 HDAC9 gene_id:9734|Hs108|chr7 (1025) 368 68.8 3.9e-11 CCDS47554.1 HDAC9 gene_id:9734|Hs108|chr7 (1066) 368 68.8 4e-11 CCDS47553.1 HDAC9 gene_id:9734|Hs108|chr7 (1069) 368 68.8 4e-11 >>CCDS43493.2 HDAC2 gene_id:3066|Hs108|chr6 (488 aa) initn: 3343 init1: 3343 opt: 3343 Z-score: 2811.2 bits: 529.9 E(32554): 2.9e-150 Smith-Waterman score: 3343; 100.0% identity (100.0% similar) in 488 aa overlap (95-582:1-488) 70 80 90 100 110 120 pF1KE0 PFLSRPSRGGSSSSSSSRRRSPVAAVAGEPMAYSQGGGKKKVCYYYDGDIGNYYYGQGHP :::::::::::::::::::::::::::::: CCDS43 MAYSQGGGKKKVCYYYDGDIGNYYYGQGHP 10 20 30 130 140 150 160 170 180 pF1KE0 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE0 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 100 110 120 130 140 150 250 260 270 280 290 300 pF1KE0 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG 160 170 180 190 200 210 310 320 330 340 350 360 pF1KE0 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD 220 230 240 250 260 270 370 380 390 400 410 420 pF1KE0 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP 280 290 300 310 320 330 430 440 450 460 470 480 pF1KE0 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV 340 350 360 370 380 390 490 500 510 520 530 540 pF1KE0 HEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 HEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEED 400 410 420 430 440 450 550 560 570 580 pF1KE0 KKETEDKKTDVKEEDKSKDNSGEKTDTKGTKSEQLSNP :::::::::::::::::::::::::::::::::::::: CCDS43 KKETEDKKTDVKEEDKSKDNSGEKTDTKGTKSEQLSNP 460 470 480 >>CCDS360.1 HDAC1 gene_id:3065|Hs108|chr1 (482 aa) initn: 2924 init1: 2811 opt: 2880 Z-score: 2423.2 bits: 458.1 E(32554): 1.2e-128 Smith-Waterman score: 2880; 85.9% identity (95.0% similar) in 483 aa overlap (95-577:1-478) 70 80 90 100 110 120 pF1KE0 PFLSRPSRGGSSSSSSSRRRSPVAAVAGEPMAYSQGGGKKKVCYYYDGDIGNYYYGQGHP :: .:: ..:::::::::.:::::::::: CCDS36 MAQTQGT-RRKVCYYYDGDVGNYYYGQGHP 10 20 130 140 150 160 170 180 pF1KE0 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK ::::::::::::::::::::::::::::::.::::::::::.:::::::::::::::::: CCDS36 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK 30 40 50 60 70 80 190 200 210 220 230 240 pF1KE0 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG ::::::::::::::::::::::::::::::.:::::.::::.:::::::::::::::::: CCDS36 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG 90 100 110 120 130 140 250 260 270 280 290 300 pF1KE0 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG 150 160 170 180 190 200 310 320 330 340 350 360 pF1KE0 DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD ::::::::::::::::.:.::::::::: ::::..::::::.::::::::::.:::::: CCDS36 DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGD 210 220 230 240 250 260 370 380 390 400 410 420 pF1KE0 RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP ::::::::.:::::::: ::.::::.:::::::::::::::::::::::::: ::::::: CCDS36 RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP 270 280 290 300 310 320 430 440 450 460 470 480 pF1KE0 YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV :::::::::::::::::::::::::: ::.:::::::::::::::::::::::::::::. CCDS36 YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAI 330 340 350 360 370 380 490 500 510 520 530 540 pF1KE0 HEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEED :.::::: .:::::::: .:::::::.:::::::.::::::.: .. :: ::... :.. CCDS36 PEESGDEDEDDPDKRISICSSDKRIACEEEFSDSEEEGEGGRKNSSNFKK-AKRVKTEDE 390 400 410 420 430 440 550 560 570 580 pF1KE0 KKETEDKKTDVKEEDKSKDNSGEKTDTKGTKSEQLSNP :.. ..: .: ::.:.:. :: ..::.: : CCDS36 KEKDPEEKKEVTEEEKTKE---EKPEAKGVKEEVKLA 450 460 470 480 >>CCDS4264.1 HDAC3 gene_id:8841|Hs108|chr5 (428 aa) initn: 1131 init1: 978 opt: 1833 Z-score: 1546.4 bits: 295.6 E(32554): 8.1e-80 Smith-Waterman score: 1833; 58.8% identity (84.4% similar) in 422 aa overlap (104-523:3-421) 80 90 100 110 120 130 pF1KE0 GSSSSSSSRRRSPVAAVAGEPMAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMT : : :.:: :.::..:: ::::::::. .: CCDS42 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALT 10 20 30 140 150 160 170 180 190 pF1KE0 HNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGE :.:.:.::::.:: ...:..:. ..: ..::..:: ::. . : ::. ..:... ::::. CCDS42 HSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGD 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE0 DCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVL ::::: ::::::. ::.:. ::..:: . :.:.::::::::::: ::::::::::::. CCDS42 DCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVI 100 110 120 130 140 150 260 270 280 290 300 310 pF1KE0 AILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYF-PGTGDLRDIGAG .:::::::: :::::::::::::::.:::: :::::::::::::.:: :::::. ..:: CCDS42 GILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAE 160 170 180 190 200 210 320 330 340 350 360 370 pF1KE0 KGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLT .:.:: .: :.::::::.:: ..:.:.:..:...:::. .:::::::::. ::::::::. CCDS42 SGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLS 220 230 240 250 260 270 380 390 400 410 420 430 pF1KE0 VKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYF ..::..::: ::.::.:::.:::::::.:::::::::::.. .. : .::::..::::: CCDS42 IRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYF 280 290 300 310 320 330 440 450 460 470 480 490 pF1KE0 GPDFKLHISPSN-MTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDE .::: :: . :. . :::. .:...:.: .::::.:: :::.::.. .: : . : :: CCDS42 APDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDE 340 350 360 370 380 390 500 510 520 530 540 550 pF1KE0 DGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDK : ..: . . . .: .:: :.. ... CCDS42 --ADAEER-GPEENYSRPEAPNEFYDGDHDNDKESDVEI 400 410 420 560 570 580 pF1KE0 KTDVKEEDKSKDNSGEKTDTKGTKSEQLSNP >>CCDS14420.1 HDAC8 gene_id:55869|Hs108|chrX (377 aa) initn: 953 init1: 551 opt: 1089 Z-score: 923.6 bits: 180.2 E(32554): 4e-45 Smith-Waterman score: 1089; 43.4% identity (77.1% similar) in 341 aa overlap (127-466:35-374) 100 110 120 130 140 150 pF1KE0 YSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATA :.: :.:.:. :.:...:.: .:. :. CCDS14 EEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASM 10 20 30 40 50 60 160 170 180 190 200 210 pF1KE0 EEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGA :::. .:.: :.. :... .. ... ... ...: :::. .:.:.. :.....: CCDS14 EEMATFHTDAYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAA 70 80 90 100 110 120 220 230 240 250 260 270 pF1KE0 VKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGD : . .:.::.:: :::::.:::::::.:: ::.::.: . .:.::.:.:.:::: CCDS14 QCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGD 130 140 150 160 170 180 280 290 300 310 320 330 pF1KE0 GVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQI :::.:: :..:::::.::.. .::::::. :.: :::.::.:: :..:::.::.: :: CCDS14 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 190 200 210 220 230 240 340 350 360 370 380 390 pF1KE0 FKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGG . ....:.. ..:.::::: :::...:: . ::.: : .::.. . ..: :.::: CCDS14 CESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGG 250 260 270 280 290 300 400 410 420 430 440 450 pF1KE0 GGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYME :::.. :.:::::: :.: : . .:.: ...: .:::. :.:.:: ..: :. .. CCDS14 GGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQ 310 320 330 340 350 360 460 470 480 490 500 510 pF1KE0 KIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEF .: . . ::. CCDS14 QILNYIKGNLKHVV 370 >>CCDS55449.1 HDAC8 gene_id:55869|Hs108|chrX (286 aa) initn: 842 init1: 551 opt: 821 Z-score: 700.6 bits: 138.6 E(32554): 1e-32 Smith-Waterman score: 821; 48.1% identity (78.9% similar) in 237 aa overlap (231-466:47-283) 210 220 230 240 250 260 pF1KE0 LFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLK : .::. ..:::::::.:: ::.::.: . CCDS55 VYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRDEASGFCYLNDAVLGILRLRR 20 30 40 50 60 70 270 280 290 300 310 pF1KE0 YHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAV .:.::.:.:.:::::::.:: :..:::::.::.. .::::::. :.: :::.::.: CCDS55 KFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSV 80 90 100 110 120 130 320 330 340 350 360 370 pF1KE0 NFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKC : :..:::.::.: :: . ....:.. ..:.::::: :::...:: . ::.: : .:: CCDS55 NVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKC 140 150 160 170 180 190 380 390 400 410 420 430 pF1KE0 VEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLH .. . ..: :.::::::.. :.:::::: :.: : . .:.: ...: .:::. :. CCDS55 LKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLE 200 210 220 230 240 250 440 450 460 470 480 490 pF1KE0 ISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR :.:: ..: :. ...: . . ::. CCDS55 ITPSCRPDRNEPHRIQQILNYIKGNLKHVV 260 270 280 >>CCDS55451.1 HDAC8 gene_id:55869|Hs108|chrX (256 aa) initn: 405 init1: 405 opt: 721 Z-score: 617.5 bits: 123.0 E(32554): 4.5e-28 Smith-Waterman score: 721; 46.2% identity (79.5% similar) in 210 aa overlap (127-335:35-243) 100 110 120 130 140 150 pF1KE0 YSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATA :.: :.:.:. :.:...:.: .:. :. CCDS55 EEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASM 10 20 30 40 50 60 160 170 180 190 200 210 pF1KE0 EEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGA :::. .:.: :.. :... .. ... ... ...: :::. .:.:.. :.....: CCDS55 EEMATFHTDAYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAA 70 80 90 100 110 120 220 230 240 250 260 270 pF1KE0 VKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGD : . .:.::.:: :::::.:::::::.:: ::.::.: . .:.::.:.:.:::: CCDS55 QCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGD 130 140 150 160 170 180 280 290 300 310 320 330 pF1KE0 GVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQI :::.:: :..:::::.::.. .::::::. :.: :::.::.:: :..:::.::.: :: CCDS55 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 190 200 210 220 230 240 340 350 360 370 380 390 pF1KE0 FKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGG CCDS55 CERYEPPAPNPGL 250 >>CCDS14306.1 HDAC6 gene_id:10013|Hs108|chrX (1215 aa) initn: 177 init1: 111 opt: 389 Z-score: 330.0 bits: 72.1 E(32554): 4.7e-12 Smith-Waterman score: 400; 26.8% identity (51.2% similar) in 426 aa overlap (13-404:375-788) 10 20 30 40 pF1KE0 MRSPPCGLLRWFGGPLLASWCRCH-LRFRAFGTSAGWYRAFP :: :. : . :: : :.::. . . CCDS14 FDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLG 350 360 370 380 390 400 50 60 70 80 pF1KE0 APPPLLP-PACPSPRDYRPHVS-----LSPF---LSRPS----RGG------SSSSSSSR : :.: :. : :. . :: : :: : : . : . : . CCDS14 DPCPMLESPGAPC-RSAQASVSCALEALEPFWEVLVRSTETVERDNMEEDNVEESEEEGP 410 420 430 440 450 460 90 100 110 120 130 140 pF1KE0 RRSPVAAVAGEPMAYSQGGGKKKVCYYYDGDIGNY--YYGQGHPMKPHRIRMTHNLLLNY . :: . :. :. : :: .. :. . . :: :.:: : . CCDS14 WEPPVLPILTWPVLQSRTG------LVYDQNMMNHCNLWDSHHPEVPQRILRIMCRLEEL 470 480 490 500 510 150 160 170 180 190 200 pF1KE0 GLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDG :: . :. :: :. :: ::. ::. . . : .. . :. :: . CCDS14 GLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATEKMKTRELHRESSNFDSIYICP---S 520 530 540 550 560 570 210 220 230 240 250 pF1KE0 LFEFCQLSTGGS--VAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAI--L : ::.::.. .. :: .. . :: : :::... : :::. :....: CCDS14 TFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPG-HHAEQDAACGFCFFNSVAVAARHA 580 590 600 610 620 630 260 270 280 290 300 310 pF1KE0 ELLKYHQ-RVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFP--GTGDLRDIGA . .. : :.: .: :.:::.:... : :. ::.:.: : .:: : .:: CCDS14 QTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGR 640 650 660 670 680 690 320 330 340 350 360 pF1KE0 GKGKYYAVNFPMRDG--IDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCF . : ..:: .: . : .: .. .. . ..: :... : :. :: :: CCDS14 AAGTGFTVNVAW-NGPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGC 700 710 720 730 740 750 370 380 390 400 410 420 pF1KE0 NLTVKGHAKCVEVVKTFNLP-LLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDY ... .:.:. .... . .... :::.. ... CCDS14 QVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPP 760 770 780 790 800 810 430 440 450 460 470 480 pF1KE0 FEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDS CCDS14 LSGALASITETIQVHRRYWRSLRVMKVEDREGPSSSKLVTKKAPQPAKPRLAERMTTREK 820 830 840 850 860 870 >>CCDS83163.1 HDAC9 gene_id:9734|Hs108|chr7 (1025 aa) initn: 227 init1: 101 opt: 368 Z-score: 313.4 bits: 68.8 E(32554): 3.9e-11 Smith-Waterman score: 422; 27.0% identity (54.8% similar) in 460 aa overlap (80-496:566-1006) 50 60 70 80 90 100 pF1KE0 ACPSPRDYRPHVSLSPFLSRPSRGGSSSSSSSRRRSPVAAVAGEPMAYS--QGGGKKKVC : . ::.:.: .: : :. . CCDS83 LEPTHTRALSVRQAPLAAVGMDGLEKHRLVSRTHSSPAASVLPHPAMDRPLQPGSATGIA 540 550 560 570 580 590 110 120 130 140 150 160 pF1KE0 YYYDGDIGNYYYGQG----HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH : : . .. : :: . ::. . : . :: : : . .::. ::. : CCDS83 Y--DPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVH 600 610 620 630 640 650 170 180 190 200 210 pF1KE0 SDEYIKFLRSIRPDNMSEYSKQM------QRFNVGEDCPVF--DGLFEFCQLSTGGS--- : :. ..: . : . .. . .. :.: . : . :. . .: ..:. CCDS83 S-EHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAARM 660 670 680 690 700 710 220 230 240 250 260 pF1KE0 -------VAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH--- .:. : .. .. .:: : :::..: : :::. :..... . :. . CCDS83 AVGCVIELASKVASGELKNGFAVVRPPG-HHAEESTAMGFCFFNSVAITA-KYLRDQLNI 720 730 740 750 760 770 270 280 290 300 310 320 pF1KE0 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVN ...: .:.:.:::.:...:::. .. .:.:.: :..:::.: ..:.: :. : .: CCDS83 SKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNIN 780 790 800 810 820 830 330 340 350 360 370 pF1KE0 FPMRDGID----DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTVK . :.: : : . :. :.. : . ..:. :... : :.: : :: ...:.: CCDS83 IAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYKVTAK 840 850 860 870 880 890 380 390 400 410 420 430 pF1KE0 --GH-AKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEY :: .: . .. . : . :: : : : . :. : . . ::: : CCDS83 CFGHLTKQLMTLADGRVVLALEGGHDLT----AICDASEACV--NALLGNEL------EP 900 910 920 930 440 450 460 470 480 pF1KE0 FGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRML--PHA---PGVQMQAIPEDAVHE .. :. :: :: ::. . . . .:... ....::. :.. :.:.: : . CCDS83 LAEDI-LHQSP-NMNAVISLQKIIEIQSKYWKSVRMVAVPRGCALAGAQLQEETETVSAL 940 950 960 970 980 990 490 500 510 520 530 540 pF1KE0 DSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEEDKK : : :.: CCDS83 ASLTVDVEQPFAQEDSRTAGEPMEEEPAL 1000 1010 1020 >>CCDS47554.1 HDAC9 gene_id:9734|Hs108|chr7 (1066 aa) initn: 227 init1: 101 opt: 368 Z-score: 313.1 bits: 68.8 E(32554): 4e-11 Smith-Waterman score: 422; 27.0% identity (54.8% similar) in 460 aa overlap (80-496:607-1047) 50 60 70 80 90 100 pF1KE0 ACPSPRDYRPHVSLSPFLSRPSRGGSSSSSSSRRRSPVAAVAGEPMAYS--QGGGKKKVC : . ::.:.: .: : :. . CCDS47 LEPTHTRALSVRQAPLAAVGMDGLEKHRLVSRTHSSPAASVLPHPAMDRPLQPGSATGIA 580 590 600 610 620 630 110 120 130 140 150 160 pF1KE0 YYYDGDIGNYYYGQG----HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH : : . .. : :: . ::. . : . :: : : . .::. ::. : CCDS47 Y--DPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVH 640 650 660 670 680 690 170 180 190 200 210 pF1KE0 SDEYIKFLRSIRPDNMSEYSKQM------QRFNVGEDCPVF--DGLFEFCQLSTGGS--- : :. ..: . : . .. . .. :.: . : . :. . .: ..:. CCDS47 S-EHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAARM 700 710 720 730 740 750 220 230 240 250 260 pF1KE0 -------VAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH--- .:. : .. .. .:: : :::..: : :::. :..... . :. . CCDS47 AVGCVIELASKVASGELKNGFAVVRPPG-HHAEESTAMGFCFFNSVAITA-KYLRDQLNI 760 770 780 790 800 810 270 280 290 300 310 320 pF1KE0 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVN ...: .:.:.:::.:...:::. .. .:.:.: :..:::.: ..:.: :. : .: CCDS47 SKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNIN 820 830 840 850 860 870 330 340 350 360 370 pF1KE0 FPMRDGID----DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTVK . :.: : : . :. :.. : . ..:. :... : :.: : :: ...:.: CCDS47 IAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYKVTAK 880 890 900 910 920 930 380 390 400 410 420 430 pF1KE0 --GH-AKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEY :: .: . .. . : . :: : : : . :. : . . ::: : CCDS47 CFGHLTKQLMTLADGRVVLALEGGHDLT----AICDASEACV--NALLGNEL------EP 940 950 960 970 440 450 460 470 480 pF1KE0 FGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRML--PHA---PGVQMQAIPEDAVHE .. :. :: :: ::. . . . .:... ....::. :.. :.:.: : . CCDS47 LAEDI-LHQSP-NMNAVISLQKIIEIQSKYWKSVRMVAVPRGCALAGAQLQEETETVSAL 980 990 1000 1010 1020 1030 490 500 510 520 530 540 pF1KE0 DSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEEDKK : : :.: CCDS47 ASLTVDVEQPFAQEDSRTAGEPMEEEPAL 1040 1050 1060 >>CCDS47553.1 HDAC9 gene_id:9734|Hs108|chr7 (1069 aa) initn: 227 init1: 101 opt: 368 Z-score: 313.1 bits: 68.8 E(32554): 4e-11 Smith-Waterman score: 422; 27.0% identity (54.8% similar) in 460 aa overlap (80-496:610-1050) 50 60 70 80 90 100 pF1KE0 ACPSPRDYRPHVSLSPFLSRPSRGGSSSSSSSRRRSPVAAVAGEPMAYS--QGGGKKKVC : . ::.:.: .: : :. . CCDS47 LEPTHTRALSVRQAPLAAVGMDGLEKHRLVSRTHSSPAASVLPHPAMDRPLQPGSATGIA 580 590 600 610 620 630 110 120 130 140 150 160 pF1KE0 YYYDGDIGNYYYGQG----HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYH : : . .. : :: . ::. . : . :: : : . .::. ::. : CCDS47 Y--DPLMLKHQCVCGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVH 640 650 660 670 680 690 170 180 190 200 210 pF1KE0 SDEYIKFLRSIRPDNMSEYSKQM------QRFNVGEDCPVF--DGLFEFCQLSTGGS--- : :. ..: . : . .. . .. :.: . : . :. . .: ..:. CCDS47 S-EHHSLLYGTNPLDGQKLDPRILLGDDSQKFFSSLPCGGLGVDSDTIWNELHSSGAARM 700 710 720 730 740 750 220 230 240 250 260 pF1KE0 -------VAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH--- .:. : .. .. .:: : :::..: : :::. :..... . :. . CCDS47 AVGCVIELASKVASGELKNGFAVVRPPG-HHAEESTAMGFCFFNSVAITA-KYLRDQLNI 760 770 780 790 800 810 270 280 290 300 310 320 pF1KE0 QRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGTGDLRDIGAGKGKYYAVN ...: .:.:.:::.:...:::. .. .:.:.: :..:::.: ..:.: :. : .: CCDS47 SKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNIN 820 830 840 850 860 870 330 340 350 360 370 pF1KE0 FPMRDGID----DESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDR--LGCFNLTVK . :.: : : . :. :.. : . ..:. :... : :.: : :: ...:.: CCDS47 IAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGYKVTAK 880 890 900 910 920 930 380 390 400 410 420 430 pF1KE0 --GH-AKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEY :: .: . .. . : . :: : : : . :. : . . ::: : CCDS47 CFGHLTKQLMTLADGRVVLALEGGHDLT----AICDASEACV--NALLGNEL------EP 940 950 960 970 980 440 450 460 470 480 pF1KE0 FGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRML--PHA---PGVQMQAIPEDAVHE .. :. :: :: ::. . . . .:... ....::. :.. :.:.: : . CCDS47 LAEDI-LHQSP-NMNAVISLQKIIEIQSKYWKSVRMVAVPRGCALAGAQLQEETETVSAL 990 1000 1010 1020 1030 1040 490 500 510 520 530 540 pF1KE0 DSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEEDKK : : :.: CCDS47 ASLTVDVEQPFAQEDSRTAGEPMEEEPAL 1050 1060 582 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:00:09 2016 done: Mon Nov 7 04:00:10 2016 Total Scan time: 3.800 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]