Result of FASTA (omim) for
pFN21AB7669
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7669, 338 aa
1>>>pF1KB7669 338 - 338 aa - 338 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.0439+/-0.000319; mu= -1.2225+/- 0.020
mean_var=308.3208+/-61.379, 0's: 0 Z-trim(126.7): 38 B-trim: 0 in 0/58
Lambda= 0.073042
statistics sampled from 53220 (53262) to 53220 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.87), E-opt: 0.2 (0.624), width: 16
Scan time: 10.390
The best scores are: opt bits E(85289)
NP_006723 (OMIM: 164772) protein fosB isoform 1 [H ( 338) 2290 253.6 4.5e-67
XP_005258748 (OMIM: 164772) PREDICTED: protein fos ( 237) 1589 179.6 5.9e-45
NP_001107643 (OMIM: 164772) protein fosB isoform 2 ( 302) 1058 123.7 5e-28
XP_016859226 (OMIM: 601575) PREDICTED: fos-related ( 287) 487 63.5 6.2e-10
NP_005244 (OMIM: 601575) fos-related antigen 2 [Ho ( 326) 487 63.6 6.8e-10
NP_005243 (OMIM: 164810) proto-oncogene c-Fos [Hom ( 380) 484 63.3 9.5e-10
NP_001287785 (OMIM: 136515) fos-related antigen 1 ( 205) 448 59.3 8.3e-09
NP_005429 (OMIM: 136515) fos-related antigen 1 iso ( 271) 441 58.7 1.7e-08
NP_001193417 (OMIM: 603148) cyclic AMP-dependent t ( 124) 274 40.8 0.0019
NP_001193413 (OMIM: 603148) cyclic AMP-dependent t ( 124) 274 40.8 0.0019
XP_011507881 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 274 40.9 0.0025
NP_001025458 (OMIM: 603148) cyclic AMP-dependent t ( 181) 274 40.9 0.0025
NP_001665 (OMIM: 603148) cyclic AMP-dependent tran ( 181) 274 40.9 0.0025
XP_005273203 (OMIM: 603148) PREDICTED: cyclic AMP- ( 181) 274 40.9 0.0025
XP_005264288 (OMIM: 601575) PREDICTED: fos-related ( 205) 270 40.5 0.0037
XP_016876462 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 259 39.3 0.007
XP_005267389 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 259 39.3 0.007
XP_016876464 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 259 39.3 0.007
NP_569736 (OMIM: 608657) jun dimerization protein ( 163) 259 39.3 0.007
NP_001128519 (OMIM: 608657) jun dimerization prote ( 163) 259 39.3 0.007
NP_001128520 (OMIM: 608657) jun dimerization prote ( 163) 259 39.3 0.007
XP_016876463 (OMIM: 608657) PREDICTED: jun dimeriz ( 163) 259 39.3 0.007
XP_016876461 (OMIM: 608657) PREDICTED: jun dimeriz ( 174) 259 39.3 0.0073
NP_001128521 (OMIM: 608657) jun dimerization prote ( 174) 259 39.3 0.0073
XP_016876460 (OMIM: 608657) PREDICTED: jun dimeriz ( 206) 259 39.4 0.0083
>>NP_006723 (OMIM: 164772) protein fosB isoform 1 [Homo (338 aa)
initn: 2290 init1: 2290 opt: 2290 Z-score: 1325.2 bits: 253.6 E(85289): 4.5e-67
Smith-Waterman score: 2290; 100.0% identity (100.0% similar) in 338 aa overlap (1-338:1-338)
10 20 30 40 50 60
pF1KB7 MFQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGSFVPTVTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MFQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGSFVPTVTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ITTSQDLQWLVQPTLISSMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGYSSGGASGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ITTSQDLQWLVQPTLISSMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGYSSGGASGS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GGPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GGPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAEVRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAEVRD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LPGSAPAKEDGFSWLLPPPPPPPLPFQTSQDAPPNLTASLFTHSEVQVLGDPFPVVNPSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LPGSAPAKEDGFSWLLPPPPPPPLPFQTSQDAPPNLTASLFTHSEVQVLGDPFPVVNPSY
250 260 270 280 290 300
310 320 330
pF1KB7 TSSFVLTCPEVSAFAGAQRTSGSDQPSDPLNSPSLLAL
::::::::::::::::::::::::::::::::::::::
NP_006 TSSFVLTCPEVSAFAGAQRTSGSDQPSDPLNSPSLLAL
310 320 330
>>XP_005258748 (OMIM: 164772) PREDICTED: protein fosB is (237 aa)
initn: 1589 init1: 1589 opt: 1589 Z-score: 928.0 bits: 179.6 E(85289): 5.9e-45
Smith-Waterman score: 1589; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237)
10 20 30 40 50 60
pF1KB7 MFQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGSFVPTVTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MFQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGSFVPTVTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ITTSQDLQWLVQPTLISSMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGYSSGGASGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ITTSQDLQWLVQPTLISSMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGYSSGGASGS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GGPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GGPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 DRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAEVRD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAE
190 200 210 220 230
250 260 270 280 290 300
pF1KB7 LPGSAPAKEDGFSWLLPPPPPPPLPFQTSQDAPPNLTASLFTHSEVQVLGDPFPVVNPSY
>>NP_001107643 (OMIM: 164772) protein fosB isoform 2 [Ho (302 aa)
initn: 1163 init1: 1051 opt: 1058 Z-score: 624.2 bits: 123.7 E(85289): 5e-28
Smith-Waterman score: 1977; 89.3% identity (89.3% similar) in 338 aa overlap (1-338:1-302)
10 20 30 40 50 60
pF1KB7 MFQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGSFVPTVTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MFQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGSFVPTVTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ITTSQDLQWLVQPTLISSMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGYSSGGASGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITTSQDLQWLVQPTLISSMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGYSSGGASGS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 GGPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELT
:::::::::::::::::::::::::::::
NP_001 GGPSTSGTTSGPGPARPARARPRRPREET-------------------------------
130 140
190 200 210 220 230 240
pF1KB7 DRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAEVRD
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -----ETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAEVRD
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB7 LPGSAPAKEDGFSWLLPPPPPPPLPFQTSQDAPPNLTASLFTHSEVQVLGDPFPVVNPSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPGSAPAKEDGFSWLLPPPPPPPLPFQTSQDAPPNLTASLFTHSEVQVLGDPFPVVNPSY
210 220 230 240 250 260
310 320 330
pF1KB7 TSSFVLTCPEVSAFAGAQRTSGSDQPSDPLNSPSLLAL
::::::::::::::::::::::::::::::::::::::
NP_001 TSSFVLTCPEVSAFAGAQRTSGSDQPSDPLNSPSLLAL
270 280 290 300
>>XP_016859226 (OMIM: 601575) PREDICTED: fos-related ant (287 aa)
initn: 638 init1: 433 opt: 487 Z-score: 299.3 bits: 63.5 E(85289): 6.2e-10
Smith-Waterman score: 673; 46.7% identity (63.7% similar) in 317 aa overlap (50-338:1-287)
20 30 40 50 60 70
pF1KB7 SAESQYLSSVDSFGSPPTAAASQECAGLGEMPGS---FVPTVTAITTSQDLQWLVQPTLI
:::: :.::..::::::::::.::::.:
XP_016 MPGSGSAFIPTINAITTSQDLQWMVQPTVI
10 20 30
80 90 100 110 120 130
pF1KB7 SSMAQSQGQPLASQP-PVVDPYD-MPGTSYSTPGMSGYSSGGASGSGGPSTSGTTSGPGP
.:: :.: : ::. .:: . :.:: . :. .: ::: :
XP_016 TSM---------SNPYPRSHPYSPLPGLA-SVPGHMALPRPGVI-----KTIGTTVG---
40 50 60 70
140 150 160 170 180 190
pF1KB7 ARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEK
:: :.: :.::::::::.::::::::::::::::::::..:::::..:::::
XP_016 --------RRRRDEQLSPEEEEKRRIRRERNKLAAAKCRNRRRELTEKLQAETEELEEEK
80 90 100 110 120
200 210 220 230 240
pF1KB7 AELESEIAELQKEKERLEFVLVAHKPGCKIPYEE---GPGPGPLAEVRDLPGSAPA---K
. :..::::::::::.:::.:::: : ::: :: :.:: : .:. ::. : :
XP_016 SGLQKEIAELQKEKEKLEFMLVAHGPVCKISPEERRSPPAPG-LQPMRSGGGSVGAVVVK
130 140 150 160 170 180
250 260 270 280 290 300
pF1KB7 EDGFSWLLPPPPPPPLP-FQTSQDAPPNLTASLF----THSEVQVLGDPFPVVNPSYTSS
.. . : : : : : ....... :. . : . : .:.:. ::.
XP_016 QEPLEEDSPSSSSAGLDKAQRSVIKPISIAGGFYGEEPLHTPIVVTSTP--AVTPG-TSN
190 200 210 220 230 240
310 320 330
pF1KB7 FVLTCPEV----------SAFAGAQRTSGS--DQPSDPLNSPSLLAL
.:.: : : . . :.: :.: :: :: ::::.::::
XP_016 LVFTYPSVLEQESPASPSESCSKAHRRSSSSGDQSSDSLNSPTLLAL
250 260 270 280
>>NP_005244 (OMIM: 601575) fos-related antigen 2 [Homo s (326 aa)
initn: 638 init1: 433 opt: 487 Z-score: 298.6 bits: 63.6 E(85289): 6.8e-10
Smith-Waterman score: 722; 44.0% identity (63.4% similar) in 366 aa overlap (1-338:1-326)
10 20 30 40 50
pF1KB7 MFQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGS---FVPT
:.: .::..:..:: ::. :... :: ....:. . .:::: :.::
NP_005 MYQDYPGNFDTSSRGSSGSPAHAESYSS---------GGGGQQKFRV-DMPGSGSAFIPT
10 20 30 40 50
60 70 80 90 100 110
pF1KB7 VTAITTSQDLQWLVQPTLISSMAQSQGQPLASQP-PVVDPYD-MPGTSYSTPGMSGYSSG
..::::::::::.::::.:.:: :.: : ::. .:: . :.:: .
NP_005 INAITTSQDLQWMVQPTVITSM---------SNPYPRSHPYSPLPGLA-SVPGHMALPRP
60 70 80 90 100
120 130 140 150 160 170
pF1KB7 GASGSGGPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNR
:. .: ::: : :: :.: :.::::::::.:::::::::::::::
NP_005 GVI-----KTIGTTVG-----------RRRRDEQLSPEEEEKRRIRRERNKLAAAKCRNR
110 120 130 140
180 190 200 210 220 230
pF1KB7 RRELTDRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEE---GPGP
:::::..:::::..:::::. :..::::::::::.:::.:::: : ::: :: :.:
NP_005 RRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLEFMLVAHGPVCKISPEERRSPPAP
150 160 170 180 190 200
240 250 260 270 280
pF1KB7 GPLAEVRDLPGSAPA---KEDGFSWLLPPPPPPPLP-FQTSQDAPPNLTASLF----THS
: : .:. ::. : :.. . : : : : : ....... :.
NP_005 G-LQPMRSGGGSVGAVVVKQEPLEEDSPSSSSAGLDKAQRSVIKPISIAGGFYGEEPLHT
210 220 230 240 250 260
290 300 310 320 330
pF1KB7 EVQVLGDPFPVVNPSYTSSFVLTCPEV----------SAFAGAQRTSGS--DQPSDPLNS
. : . : .:.:. ::..:.: : : . . :.: :.: :: :: :::
NP_005 PIVVTSTP--AVTPG-TSNLVFTYPSVLEQESPASPSESCSKAHRRSSSSGDQSSDSLNS
270 280 290 300 310 320
pF1KB7 PSLLAL
:.::::
NP_005 PTLLAL
>>NP_005243 (OMIM: 164810) proto-oncogene c-Fos [Homo sa (380 aa)
initn: 711 init1: 440 opt: 484 Z-score: 296.0 bits: 63.3 E(85289): 9.5e-10
Smith-Waterman score: 706; 42.1% identity (63.5% similar) in 375 aa overlap (1-314:2-351)
10 20 30 40 50
pF1KB7 MFQAFPGDYD-SGSRCSS-SPSAES--QYLSSVDSFGSPPTAAASQE-CAGLGEMPGSF
::..: .::. :.::::: ::...: : : .:::.: . . .:. :. :. ..:
NP_005 MMFSGFNADYEASSSRCSSASPAGDSLSYYHSPADSFSSMGSPVNAQDFCTDLAVSSANF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 VPTVTAITTSQDLQWLVQPTLISSMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGYSS
.::::::.:: ::::::::.:.::.: :: .. : :. .:. :. ..::
NP_005 IPTVTAISTSPDLQWLVQPALVSSVAPSQ-----TRAP--HPFGVPA-----PSAGAYSR
70 80 90 100
120 130 140 150 160 170
pF1KB7 GGASGSGGPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRN
.:. . :.: ... : :: . : :.::::::::.::::::.:::::::
NP_005 AGVVKT---MTGGRAQSIG---------RRGKVEQLSPEEEEKRRIRRERNKMAAAKCRN
110 120 130 140 150
180 190 200 210 220 230
pF1KB7 RRRELTDRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEG-PGPG
::::::: :::::::::.::. :..:::.: ::::.:::.:.::.:.:::: . : :
NP_005 RRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILAAHRPACKIPDDLGFPEEM
160 170 180 190 200 210
240 250 260
pF1KB7 PLAEVRDLPG-----SAPAKEDGFSW-LLPPPPPPPL---------------PF------
.: . :: : ..: .:..:. :: : : : ::
NP_005 SVASL-DLTGGLPEVATPESEEAFTLPLLNDPEPKPSVEPVKSISSMELKTEPFDDFLFP
220 230 240 250 260 270
270 280 290
pF1KB7 --------QTSQDAPP-NLTASLFT------HSEVQVLG------DPF--PVVN--PS--
.:....: .:..:... :: .: .:. :::. ::
NP_005 ASSRPSGSETARSVPDMDLSGSFYAADWEPLHSGSLGMGPMATELEPLCTPVVTCTPSCT
280 290 300 310 320 330
300 310 320 330
pF1KB7 -YTSSFVLTCPEVSAFAGAQRTSGSDQPSDPLNSPSLLAL
::::::.: ::...:
NP_005 AYTSSFVFTYPEADSFPSCAAAHRKGSSSNEPSSDSLSSPTLLAL
340 350 360 370 380
>>NP_001287785 (OMIM: 136515) fos-related antigen 1 isof (205 aa)
initn: 480 init1: 394 opt: 448 Z-score: 279.1 bits: 59.3 E(85289): 8.3e-09
Smith-Waterman score: 519; 48.4% identity (64.4% similar) in 225 aa overlap (119-338:6-205)
90 100 110 120 130 140
pF1KB7 SQPPVVDPYDMPGTSYSTPGMSGYSSGGASGSGGPSTSGTTSG-PGPARPARARPRRPRE
: ::: ::. .: :::.: :
NP_001 MFRDFGEPGPS-SGNGGGYGGPAQPPAAAQ---AA
10 20 30
150 160 170 180 190 200
pF1KB7 ETLTPEEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIAELQKE
. ..:::::.:::::::::::::::::::.:::: ::::::.::.::. :. :: ::::.
NP_001 QQISPEEEERRRVRRERNKLAAAKCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQ
40 50 60 70 80 90
210 220 230 240 250 260
pF1KB7 KERLEFVLVAHKPGCKIPYEEGPGPGPLAEVRDLPGSAPAKEDGFSWLLPPPPPPPLPFQ
:::::.:: ::.: :::: :: : ::. .: : :: : :.:
NP_001 KERLELVLEAHRPICKIP--EGAKEGD-------TGST----SGTS--SPPAPCRPVPCI
100 110 120 130
270 280 290 300 310 320
pF1KB7 TSQDAPPNLTASLFTHSEVQVLGDPFPVVNPSYTSSFVLT---CPEVSAFAGAQRTSGSD
. . .: .: : . . . : ..: .: :.:.: :: : : . .:.:
NP_001 SLSPGPVLEPEALHTPTLMTT-----PSLTP-FTPSLVFTYPSTPEPCASAHRKSSSSSG
140 150 160 170 180 190
330
pF1KB7 QPS-DPLNSPSLLAL
.:: :::.::.::::
NP_001 DPSSDPLGSPTLLAL
200
>>NP_005429 (OMIM: 136515) fos-related antigen 1 isoform (271 aa)
initn: 477 init1: 400 opt: 441 Z-score: 273.5 bits: 58.7 E(85289): 1.7e-08
Smith-Waterman score: 561; 40.5% identity (59.2% similar) in 311 aa overlap (32-338:18-271)
10 20 30 40 50 60
pF1KB7 FQAFPGDYDSGSRCSSSPSAESQYLSSVDSFGSPPTAAASQECAGLGEMPGSFVPTVTAI
.:.: :. . : .. .::.....
NP_005 MFRDFGEPGPSSGNGGGYGGPAQPPAAAQAA---QQKFHLVPSINTM
10 20 30 40
70 80 90 100 110 120
pF1KB7 TTSQDLQWLVQPTLISSMAQSQGQPLASQPPVVDPYDMPGTSYSTPGMSGYSSGGASGSG
. ::.:::.::: ... .: .:: . : : ::. .
NP_005 SGSQELQWMVQPHFLG--PSSYPRPL-TYPQYSPPQPRPGVIRAL---------------
50 60 70 80
130 140 150 160 170 180
pF1KB7 GPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRRELTD
:: :. .: ::: :. ..:::::.:::::::::::::::::::.::::
NP_005 ---------GPPPG--VR---RRPCEQ-ISPEEEERRRVRRERNKLAAAKCRNRRKELTD
90 100 110 120 130
190 200 210 220 230 240
pF1KB7 RLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAEVRDL
::::::.::.::. :. :: ::::.:::::.:: ::.: :::: :: :
NP_005 FLQAETDKLEDEKSGLQREIEELQKQKERLELVLEAHRPICKIP--EGAKEGD-------
140 150 160 170 180
250 260 270 280 290 300
pF1KB7 PGSAPAKEDGFSWLLPPPPPPPLPFQTSQDAPPNLTASLFTHSEVQVLGDPFPVVNPSYT
::. .: : :: : :.: . . .: .: : . . . : ..: .:
NP_005 TGST----SGTS--SPPAPCRPVPCISLSPGPVLEPEALHTPTLMTT-----PSLTP-FT
190 200 210 220 230
310 320 330
pF1KB7 SSFVLT---CPEVSAFAGAQRTSGSDQPS-DPLNSPSLLAL
:.:.: :: : : . .:.: .:: :::.::.::::
NP_005 PSLVFTYPSTPEPCASAHRKSSSSSGDPSSDPLGSPTLLAL
240 250 260 270
>>NP_001193417 (OMIM: 603148) cyclic AMP-dependent trans (124 aa)
initn: 314 init1: 233 opt: 274 Z-score: 182.8 bits: 40.8 E(85289): 0.0019
Smith-Waterman score: 274; 47.0% identity (80.7% similar) in 83 aa overlap (150-232:24-106)
120 130 140 150 160 170
pF1KB7 SGGPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRREL
..:::.:... ::::::.:::::::...:
NP_001 MSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEK
10 20 30 40 50
180 190 200 210 220 230
pF1KB7 TDRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAEVR
:. :: :...:: .:::...: ::..::..: ..: :.: : . ..: :
NP_001 TECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLF
60 70 80 90 100 110
240 250 260 270 280 290
pF1KB7 DLPGSAPAKEDGFSWLLPPPPPPPLPFQTSQDAPPNLTASLFTHSEVQVLGDPFPVVNPS
NP_001 IQQIKEGTLQS
120
>>NP_001193413 (OMIM: 603148) cyclic AMP-dependent trans (124 aa)
initn: 314 init1: 233 opt: 274 Z-score: 182.8 bits: 40.8 E(85289): 0.0019
Smith-Waterman score: 274; 47.0% identity (80.7% similar) in 83 aa overlap (150-232:24-106)
120 130 140 150 160 170
pF1KB7 SGGPSTSGTTSGPGPARPARARPRRPREETLTPEEEEKRRVRRERNKLAAAKCRNRRREL
..:::.:... ::::::.:::::::...:
NP_001 MSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKEK
10 20 30 40 50
180 190 200 210 220 230
pF1KB7 TDRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKPGCKIPYEEGPGPGPLAEVR
:. :: :...:: .:::...: ::..::..: ..: :.: : . ..: :
NP_001 TECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNGRTPEDERNLF
60 70 80 90 100 110
240 250 260 270 280 290
pF1KB7 DLPGSAPAKEDGFSWLLPPPPPPPLPFQTSQDAPPNLTASLFTHSEVQVLGDPFPVVNPS
NP_001 IQQIKEGTLQS
120
338 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 21:27:46 2016 done: Fri Nov 4 21:27:47 2016
Total Scan time: 10.390 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]