FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0132, 246 aa 1>>>pF1KE0132 246 - 246 aa - 246 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.9118+/-0.000479; mu= -1.9917+/- 0.030 mean_var=190.9397+/-39.154, 0's: 0 Z-trim(114.7): 10 B-trim: 269 in 1/55 Lambda= 0.092817 statistics sampled from 24733 (24737) to 24733 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.29), width: 16 Scan time: 7.160 The best scores are: opt bits E(85289) NP_005736 (OMIM: 300398,300475) B-cell receptor-as ( 246) 1532 217.3 1.9e-56 NP_001243376 (OMIM: 300398,300475) B-cell receptor ( 246) 1532 217.3 1.9e-56 NP_001132913 (OMIM: 300398,300475) B-cell receptor ( 246) 1532 217.3 1.9e-56 NP_001132929 (OMIM: 300398,300475) B-cell receptor ( 313) 1532 217.4 2.4e-56 >>NP_005736 (OMIM: 300398,300475) B-cell receptor-associ (246 aa) initn: 1532 init1: 1532 opt: 1532 Z-score: 1134.3 bits: 217.3 E(85289): 1.9e-56 Smith-Waterman score: 1532; 100.0% identity (100.0% similar) in 246 aa overlap (1-246:1-246) 10 20 30 40 50 60 pF1KE0 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 LLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 LLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 NRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQAAVDGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 NRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQAAVDGP 190 200 210 220 230 240 pF1KE0 MDKKEE :::::: NP_005 MDKKEE >>NP_001243376 (OMIM: 300398,300475) B-cell receptor-ass (246 aa) initn: 1532 init1: 1532 opt: 1532 Z-score: 1134.3 bits: 217.3 E(85289): 1.9e-56 Smith-Waterman score: 1532; 100.0% identity (100.0% similar) in 246 aa overlap (1-246:1-246) 10 20 30 40 50 60 pF1KE0 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 LLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 NRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQAAVDGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQAAVDGP 190 200 210 220 230 240 pF1KE0 MDKKEE :::::: NP_001 MDKKEE >>NP_001132913 (OMIM: 300398,300475) B-cell receptor-ass (246 aa) initn: 1532 init1: 1532 opt: 1532 Z-score: 1134.3 bits: 217.3 E(85289): 1.9e-56 Smith-Waterman score: 1532; 100.0% identity (100.0% similar) in 246 aa overlap (1-246:1-246) 10 20 30 40 50 60 pF1KE0 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 LLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 NRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQAAVDGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQAAVDGP 190 200 210 220 230 240 pF1KE0 MDKKEE :::::: NP_001 MDKKEE >>NP_001132929 (OMIM: 300398,300475) B-cell receptor-ass (313 aa) initn: 1532 init1: 1532 opt: 1532 Z-score: 1132.7 bits: 217.4 E(85289): 2.4e-56 Smith-Waterman score: 1532; 100.0% identity (100.0% similar) in 246 aa overlap (1-246:68-313) 10 20 30 pF1KE0 MSLQWTAVATFLYAEVFVVLLLCIPFISPK :::::::::::::::::::::::::::::: NP_001 GEAALDVLTHVLEGAGNKLTSSCGKPSSNRMSLQWTAVATFLYAEVFVVLLLCIPFISPK 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE0 RWQKIFKSRLVELLVSYGNTFFVVLIVILVLLVIDAVREIRKYDDVTEKVNLQNNPGAME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RWQKIFKSRLVELLVSYGNTFFVVLIVILVLLVIDAVREIRKYDDVTEKVNLQNNPGAME 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE0 HFHMKLFRAQRNLYIAGFSLLLSFLLRRLVTLISQQATLLASNEAFKKQAESASEAAKKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HFHMKLFRAQRNLYIAGFSLLLSFLLRRLVTLISQQATLLASNEAFKKQAESASEAAKKY 160 170 180 190 200 210 160 170 180 190 200 210 pF1KE0 MEENDQLKKGAAVDGGKLDVGNAEVKLEEENRSLKADLQKLKDELASTKQKLEKAENQVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEENDQLKKGAAVDGGKLDVGNAEVKLEEENRSLKADLQKLKDELASTKQKLEKAENQVL 220 230 240 250 260 270 220 230 240 pF1KE0 AMRKQSEGLTKEYDRLLEEHAKLQAAVDGPMDKKEE :::::::::::::::::::::::::::::::::::: NP_001 AMRKQSEGLTKEYDRLLEEHAKLQAAVDGPMDKKEE 280 290 300 310 246 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:08:19 2016 done: Mon Nov 7 04:08:20 2016 Total Scan time: 7.160 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]