FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0132, 246 aa 1>>>pF1KE0132 246 - 246 aa - 246 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.4202+/-0.00117; mu= 0.5358+/- 0.070 mean_var=166.7902+/-33.390, 0's: 0 Z-trim(107.4): 12 B-trim: 54 in 1/52 Lambda= 0.099309 statistics sampled from 9577 (9581) to 9577 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.294), width: 16 Scan time: 2.180 The best scores are: opt bits E(32554) CCDS14727.1 BCAP31 gene_id:10134|Hs108|chrX ( 246) 1532 231.3 4.8e-61 CCDS48191.1 BCAP31 gene_id:10134|Hs108|chrX ( 313) 1532 231.3 5.8e-61 CCDS34731.1 BCAP29 gene_id:55973|Hs108|chr7 ( 241) 733 116.8 1.4e-26 CCDS34730.1 BCAP29 gene_id:55973|Hs108|chr7 ( 348) 734 117.0 1.7e-26 >>CCDS14727.1 BCAP31 gene_id:10134|Hs108|chrX (246 aa) initn: 1532 init1: 1532 opt: 1532 Z-score: 1209.5 bits: 231.3 E(32554): 4.8e-61 Smith-Waterman score: 1532; 100.0% identity (100.0% similar) in 246 aa overlap (1-246:1-246) 10 20 30 40 50 60 pF1KE0 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 LLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 LLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 NRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQAAVDGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 NRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQAAVDGP 190 200 210 220 230 240 pF1KE0 MDKKEE :::::: CCDS14 MDKKEE >>CCDS48191.1 BCAP31 gene_id:10134|Hs108|chrX (313 aa) initn: 1532 init1: 1532 opt: 1532 Z-score: 1207.9 bits: 231.3 E(32554): 5.8e-61 Smith-Waterman score: 1532; 100.0% identity (100.0% similar) in 246 aa overlap (1-246:68-313) 10 20 30 pF1KE0 MSLQWTAVATFLYAEVFVVLLLCIPFISPK :::::::::::::::::::::::::::::: CCDS48 GEAALDVLTHVLEGAGNKLTSSCGKPSSNRMSLQWTAVATFLYAEVFVVLLLCIPFISPK 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE0 RWQKIFKSRLVELLVSYGNTFFVVLIVILVLLVIDAVREIRKYDDVTEKVNLQNNPGAME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 RWQKIFKSRLVELLVSYGNTFFVVLIVILVLLVIDAVREIRKYDDVTEKVNLQNNPGAME 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE0 HFHMKLFRAQRNLYIAGFSLLLSFLLRRLVTLISQQATLLASNEAFKKQAESASEAAKKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 HFHMKLFRAQRNLYIAGFSLLLSFLLRRLVTLISQQATLLASNEAFKKQAESASEAAKKY 160 170 180 190 200 210 160 170 180 190 200 210 pF1KE0 MEENDQLKKGAAVDGGKLDVGNAEVKLEEENRSLKADLQKLKDELASTKQKLEKAENQVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 MEENDQLKKGAAVDGGKLDVGNAEVKLEEENRSLKADLQKLKDELASTKQKLEKAENQVL 220 230 240 250 260 270 220 230 240 pF1KE0 AMRKQSEGLTKEYDRLLEEHAKLQAAVDGPMDKKEE :::::::::::::::::::::::::::::::::::: CCDS48 AMRKQSEGLTKEYDRLLEEHAKLQAAVDGPMDKKEE 280 290 300 310 >>CCDS34731.1 BCAP29 gene_id:55973|Hs108|chr7 (241 aa) initn: 731 init1: 293 opt: 733 Z-score: 590.9 bits: 116.8 E(32554): 1.4e-26 Smith-Waterman score: 733; 50.6% identity (79.6% similar) in 235 aa overlap (1-234:1-230) 10 20 30 40 50 60 pF1KE0 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV :.:::.:::::::::. ..:..:.::: :.::::::. . .... : :...:..:. CCDS34 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 10 20 30 40 50 60 70 80 90 100 110 pF1KE0 LLVIDAVREIRKYDDV-TEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRL .: .:::::.:::..: : . . . : :.:: .:::::.::::::.::::.. ..:::: CCDS34 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE0 VTLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEE ::::.: : :... ..: :::....::::.::::..::. . :: . : :: CCDS34 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKR-ILKSHGK----DEECVLEA 130 140 150 160 170 180 190 200 210 220 230 pF1KE0 ENRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQAAVDG ::..: : .::: :: .:.. : ::.:.:. :. ::: :.::::.::.::..:: CCDS34 ENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQDRLER 180 190 200 210 220 230 240 pF1KE0 PMDKKEE CCDS34 GNKKRL 240 >>CCDS34730.1 BCAP29 gene_id:55973|Hs108|chr7 (348 aa) initn: 731 init1: 293 opt: 734 Z-score: 589.3 bits: 117.0 E(32554): 1.7e-26 Smith-Waterman score: 734; 49.4% identity (78.4% similar) in 245 aa overlap (1-244:1-240) 10 20 30 40 50 60 pF1KE0 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV :.:::.:::::::::. ..:..:.::: :.::::::. . .... : :...:..:. CCDS34 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 10 20 30 40 50 60 70 80 90 100 110 pF1KE0 LLVIDAVREIRKYDDV-TEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRL .: .:::::.:::..: : . . . : :.:: .:::::.::::::.::::.. ..:::: CCDS34 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE0 VTLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEE ::::.: : :... ..: :::....::::.::::..::. . :: . : :: CCDS34 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKR-ILKSHGK----DEECVLEA 130 140 150 160 170 180 190 200 210 220 230 pF1KE0 ENRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQAAVDG ::..: : .::: :: .:.. : ::.:.:. :. ::: :.::::.::.::..:: . : CCDS34 ENKKLVEDQEKLKTELRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQHSSFG 180 190 200 210 220 230 240 pF1KE0 PMDKKEE . .: CCDS34 EFLSKRSHKNGSIGKQTGSRKGSFRKRQQEKTVNFIKDTCNILCQNDNFVMLASRKFKFR 240 250 260 270 280 290 246 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:08:18 2016 done: Mon Nov 7 04:08:19 2016 Total Scan time: 2.180 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]