FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KA0432, 802 aa 1>>>pF1KA0432 802 - 802 aa - 802 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.6739+/-0.00109; mu= 5.3154+/- 0.065 mean_var=169.0116+/-34.693, 0's: 0 Z-trim(108.8): 25 B-trim: 445 in 1/50 Lambda= 0.098654 statistics sampled from 10416 (10433) to 10416 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.66), E-opt: 0.2 (0.32), width: 16 Scan time: 4.050 The best scores are: opt bits E(32554) CCDS4912.1 CDC5L gene_id:988|Hs108|chr6 ( 802) 5241 758.7 8.5e-219 >>CCDS4912.1 CDC5L gene_id:988|Hs108|chr6 (802 aa) initn: 5241 init1: 5241 opt: 5241 Z-score: 4041.6 bits: 758.7 E(32554): 8.5e-219 Smith-Waterman score: 5241; 100.0% identity (100.0% similar) in 802 aa overlap (1-802:1-802) 10 20 30 40 50 60 pF1KA0 MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA0 TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA0 RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA0 RLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 RLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KA0 KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KA0 QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KA0 RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KA0 EGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 EGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KA0 LGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEMKRMHKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 LGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEMKRMHKA 490 500 510 520 530 540 550 560 570 580 590 600 pF1KA0 VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG 550 560 570 580 590 600 610 620 630 640 650 660 pF1KA0 KTVGFGTNNSEHITYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 KTVGFGTNNSEHITYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQV 610 620 630 640 650 660 670 680 690 700 710 720 pF1KA0 WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL 670 680 690 700 710 720 730 740 750 760 770 780 pF1KA0 LGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 LGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQER 730 740 750 760 770 780 790 800 pF1KA0 EKELQHRYADLLLEKETLKSKF :::::::::::::::::::::: CCDS49 EKELQHRYADLLLEKETLKSKF 790 800 802 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:10:00 2016 done: Mon Nov 7 04:10:01 2016 Total Scan time: 4.050 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]