Result of FASTA (ccds) for pFN21AA0432
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0432, 802 aa
  1>>>pF1KA0432 802 - 802 aa - 802 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.6739+/-0.00109; mu= 5.3154+/- 0.065
 mean_var=169.0116+/-34.693, 0's: 0 Z-trim(108.8): 25  B-trim: 445 in 1/50
 Lambda= 0.098654
 statistics sampled from 10416 (10433) to 10416 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.66), E-opt: 0.2 (0.32), width:  16
 Scan time:  4.050

The best scores are:                                      opt bits E(32554)
CCDS4912.1 CDC5L gene_id:988|Hs108|chr6            ( 802) 5241 758.7 8.5e-219


>>CCDS4912.1 CDC5L gene_id:988|Hs108|chr6                 (802 aa)
 initn: 5241 init1: 5241 opt: 5241  Z-score: 4041.6  bits: 758.7 E(32554): 8.5e-219
Smith-Waterman score: 5241; 100.0% identity (100.0% similar) in 802 aa overlap (1-802:1-802)

               10        20        30        40        50        60
pF1KA0 MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETTDDP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 RLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 RLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSVALRTPRTPASQD
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGA
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 EGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 EGLTPRSGTTPKPVINSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 LGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEMKRMHKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 LGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEMKRMHKA
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA0 VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KA0 KTVGFGTNNSEHITYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 KTVGFGTNNSEHITYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQV
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KA0 WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KA0 LGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 LGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQER
              730       740       750       760       770       780

              790       800  
pF1KA0 EKELQHRYADLLLEKETLKSKF
       ::::::::::::::::::::::
CCDS49 EKELQHRYADLLLEKETLKSKF
              790       800  




802 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 04:10:00 2016 done: Mon Nov  7 04:10:01 2016
 Total Scan time:  4.050 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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