(Linear) (Six-base) MAPSORT of: KIAA0432.seq Check: 3342 from: 1 to: 2406 KIAA0432.orf With 182 enzymes: SgfI * July 15, 2010 18:28 .. AatII G_ACGT'C Cuts at: 0 543 2406 Size: 543 1863 Acc65I G'GTAC_C Cuts at: 0 1816 2406 Size: 1816 590 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 479 1280 2406 Size: 479 801 1126 Fragments arranged by size: 1126 801 479 AleI CACnn'nnGTG Cuts at: 0 1120 2406 Size: 1120 1286 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 150 300 2406 Size: 150 150 2106 Fragments arranged by size: 2106 150 150 ApoI r'AATT_y Cuts at: 0 50 301 590 859 990 1082 2153 2401 Size: 50 251 289 269 131 92 1071 248 Cuts at: 2401 2406 Size: 5 Fragments arranged by size: 1071 289 269 251 248 131 92 50 5 AseI AT'TA_AT Cuts at: 0 1349 2406 Size: 1349 1057 AvaI C'yCGr_G Cuts at: 0 1354 1415 2086 2406 Size: 1354 61 671 320 Fragments arranged by size: 1354 671 320 61 BamHI G'GATC_C Cuts at: 0 162 2406 Size: 162 2244 BanI G'GyrC_C Cuts at: 0 1816 2406 Size: 1816 590 BanII G_rGCy'C Cuts at: 0 471 1955 2192 2406 Size: 471 1484 237 214 Fragments arranged by size: 1484 471 237 214 BbsI GAAGACnn'nnnn_ Cuts at: 0 184 2321 2406 Size: 184 2137 85 Fragments arranged by size: 2137 184 85 BclI T'GATC_A Cuts at: 0 14 1736 2406 Size: 14 1722 670 Fragments arranged by size: 1722 670 14 BfrBI ATG'CAT Cuts at: 0 1611 2406 Size: 1611 795 BglI GCCn_nnn'nGGC Cuts at: 0 475 2044 2125 2406 Size: 475 1569 81 281 Fragments arranged by size: 1569 475 281 81 BglII A'GATC_T Cuts at: 0 754 1629 2406 Size: 754 875 777 Fragments arranged by size: 875 777 754 BmgBI CAC'GTC Cuts at: 0 961 2406 Size: 961 1445 BmrI ACTGGGnnnn_n' Cuts at: 0 276 2406 Size: 276 2130 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1441 2406 Size: 1441 965 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 395 904 2398 2406 Size: 395 509 1494 8 Fragments arranged by size: 1494 509 395 8 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 466 1941 2248 2406 Size: 466 1475 307 158 Fragments arranged by size: 1475 466 307 158 BsaAI yAC'GTr Cuts at: 0 1392 2406 Size: 1392 1014 BsaBI GATnn'nnATC Cuts at: 0 389 2406 Size: 389 2017 BsaHI Gr'CG_yC Cuts at: 0 540 2406 Size: 540 1866 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 240 270 2406 Size: 240 30 2136 Fragments arranged by size: 2136 240 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 632 1316 2406 Size: 632 684 1090 Fragments arranged by size: 1090 684 632 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1930 2406 Size: 1930 476 BsiHKAI G_wGCw'C Cuts at: 0 1835 1955 2406 Size: 1835 120 451 Fragments arranged by size: 1835 451 120 BsmI GAATG_Cn' Cuts at: 0 1613 1993 2406 Size: 1613 380 413 Fragments arranged by size: 1613 413 380 Bsp1286I G_dGCh'C Cuts at: 0 471 1835 1955 2192 2406 Size: 471 1364 120 237 214 Fragments arranged by size: 1364 471 237 214 120 BspHI T'CATG_A Cuts at: 0 2192 2406 Size: 2192 214 BsrDI GCAATG_nn' Cuts at: 0 106 251 1156 2406 Size: 106 145 905 1250 Fragments arranged by size: 1250 905 145 106 BsrGI T'GTAC_A Cuts at: 0 1203 2406 Size: 1203 1203 BssSI C'ACGA_G Cuts at: 0 2177 2406 Size: 2177 229 BstEII G'GTnAC_C Cuts at: 0 2167 2406 Size: 2167 239 BstXI CCAn_nnnn'nTGG Cuts at: 0 242 2406 Size: 242 2164 BstYI r'GATC_y Cuts at: 0 162 384 735 754 1629 2406 Size: 162 222 351 19 875 777 Fragments arranged by size: 875 777 351 222 162 19 BtgI C'CryG_G Cuts at: 0 1944 2406 Size: 1944 462 BtsI GCAGTG_nn' Cuts at: 0 139 2406 Size: 139 2267 DraI TTT'AAA Cuts at: 0 2393 2406 Size: 2393 13 DrdI GACnn_nn'nnGTC Cuts at: 0 186 2394 2406 Size: 186 2208 12 Fragments arranged by size: 2208 186 12 EaeI y'GGCC_r Cuts at: 0 221 2406 Size: 221 2185 EarI CTCTTCn'nnn_ Cuts at: 0 194 332 558 607 765 1334 1874 2406 Size: 194 138 226 49 158 569 540 532 Fragments arranged by size: 569 540 532 226 194 158 138 49 EcoICRI GAG'CTC Cuts at: 0 1953 2406 Size: 1953 453 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 395 479 904 1280 2398 2406 Size: 395 84 425 376 1118 8 Fragments arranged by size: 1118 425 395 376 84 8 EcoRI G'AATT_C Cuts at: 0 1082 2406 Size: 1082 1324 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 1162 1982 2406 Size: 1162 820 424 Fragments arranged by size: 1162 820 424 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 222 240 254 272 739 771 811 843 Size: 222 18 14 18 467 32 40 32 Cuts at: 843 2406 Size: 1563 Fragments arranged by size: 1563 467 222 40 32 32 18 18 14 HindIII A'AGCT_T Cuts at: 0 1964 2406 Size: 1964 442 KpnI G_GTAC'C Cuts at: 0 1820 2406 Size: 1820 586 MfeI C'AATT_G Cuts at: 0 422 523 2406 Size: 422 101 1883 Fragments arranged by size: 1883 422 101 MscI TGG'CCA Cuts at: 0 223 2406 Size: 223 2183 MslI CAynn'nnrTG Cuts at: 0 1120 1166 1772 2360 2406 Size: 1120 46 606 588 46 Fragments arranged by size: 1120 606 588 46 46 MspA1I CmG'CkG Cuts at: 0 64 580 2406 Size: 64 516 1826 Fragments arranged by size: 1826 516 64 NcoI C'CATG_G Cuts at: 0 1944 2406 Size: 1944 462 NsiI A_TGCA'T Cuts at: 0 1613 2406 Size: 1613 793 PflMI CCAn_nnn'nTGG Cuts at: 0 265 2406 Size: 265 2141 PfoI T'CCnGG_A Cuts at: 0 920 2406 Size: 920 1486 PsiI TTA'TAA Cuts at: 0 629 1970 2406 Size: 629 1341 436 Fragments arranged by size: 1341 629 436 PstI C_TGCA'G Cuts at: 0 1091 2406 Size: 1091 1315 PvuII CAG'CTG Cuts at: 0 580 2406 Size: 580 1826 SacI G_AGCT'C Cuts at: 0 1955 2406 Size: 1955 451 SapI GCTCTTCn'nnn_ Cuts at: 0 1874 2406 Size: 1874 532 ScaI AGT'ACT Cuts at: 0 887 2406 Size: 887 1519 SexAI A'CCwGG_T Cuts at: 0 1973 2406 Size: 1973 433 SfcI C'TryA_G Cuts at: 0 1087 1374 1805 1992 2406 Size: 1087 287 431 187 414 Fragments arranged by size: 1087 431 414 287 187 SmlI C'TyrA_G Cuts at: 0 445 1956 2086 2263 2406 Size: 445 1511 130 177 143 Fragments arranged by size: 1511 445 177 143 130 SpeI A'CTAG_T Cuts at: 0 844 882 2406 Size: 844 38 1524 Fragments arranged by size: 1524 844 38 StyI C'CwwG_G Cuts at: 0 663 1944 2406 Size: 663 1281 462 Fragments arranged by size: 1281 663 462 TatI w'GTAC_w Cuts at: 0 885 1003 1019 1203 2406 Size: 885 118 16 184 1203 Fragments arranged by size: 1203 885 184 118 16 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 471 2406 Size: 471 1935 XhoI C'TCGA_G Cuts at: 0 2086 2406 Size: 2086 320 XmnI GAAnn'nnTTC Cuts at: 0 305 1475 1661 2318 2406 Size: 305 1170 186 657 88 Fragments arranged by size: 1170 657 305 186 88 ZraI GAC'GTC Cuts at: 0 541 2406 Size: 541 1865 Enzymes that do cut: AatII Acc65I AcuI AleI AlfI ApoI AseI AvaI BamHI BanI BanII BbsI BclI BfrBI BglI BglII BmgBI BmrI BplI BpmI BpuEI BsaAI BsaBI BsaHI BsaXI BseRI BsgI BsiHKAI BsmI Bsp1286I BspHI BsrDI BsrGI BssSI BstEII BstXI BstYI BtgI BtsI DraI DrdI EaeI EarI EcoICRI Eco57MI EcoRI FalI Hin4I HindIII KpnI MfeI MscI MslI MspA1I NcoI NsiI PflMI PfoI PsiI PstI PvuII SacI SapI ScaI SexAI SfcI SmlI SpeI StyI TatI XcmI XhoI XmnI ZraI Enzymes that do not cut: AarI AccI AclI AfeI AflII AflIII AgeI AhdI AloI AlwNI ApaI ApaLI AscI AsiSI AvrII BaeI BbeI BbvCI BcgI BciVI BlpI Bme1580I BmtI Bpu10I BsaI BsaWI BseYI BsiEI BsiWI BsmBI BspEI BspMI BsrBI BsrFI BssHII BstAPI BstBI BstZ17I Bsu36I BtgZI ClaI CspCI DraIII EagI EciI EcoNI EcoO109I EcoRV FseI FspI FspAI HaeII HincII HpaI KasI MluI MmeI NaeI NarI NdeI NgoMIV NheI NotI NruI NspI PacI PasI PciI PmeI PmlI PpiI PpuMI PshAI PspOMI PspXI PsrI PvuI RsrII SacII SalI SanDI SbfI SfiI SfoI SgfI SgrAI SmaI SnaBI SphI SrfI SspI StuI SwaI TaqII TstI Tth111I XbaI XmaI