Restriction map for pFN21AA0432
 (Linear) (Six-base) MAPSORT of: KIAA0432.seq  Check: 3342  from: 1  to: 2406



KIAA0432.orf

 With 182 enzymes: SgfI * 

                        July 15, 2010 18:28  ..

AatII G_ACGT'C

Cuts at:      0     543    2406 
   Size:        543    1863
 
Acc65I G'GTAC_C

Cuts at:      0    1816    2406 
   Size:       1816     590
 
AcuI CTGAAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     479    1280    2406 
   Size:        479     801    1126

  Fragments arranged by size: 

                1126     801     479
 
AleI CACnn'nnGTG

Cuts at:      0    1120    2406 
   Size:       1120    1286
 
AlfI GCAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:      0     150     300    2406 
   Size:        150     150    2106

  Fragments arranged by size: 

                2106     150     150
 
ApoI r'AATT_y

Cuts at:      0      50     301     590     859     990    1082    2153    2401 
   Size:         50     251     289     269     131      92    1071     248

Cuts at:   2401    2406 
   Size:          5

  Fragments arranged by size: 

                1071     289     269     251     248     131      92      50
                   5
 
AseI AT'TA_AT

Cuts at:      0    1349    2406 
   Size:       1349    1057
 
AvaI C'yCGr_G

Cuts at:      0    1354    1415    2086    2406 
   Size:       1354      61     671     320

  Fragments arranged by size: 

                1354     671     320      61
 
BamHI G'GATC_C

Cuts at:      0     162    2406 
   Size:        162    2244
 
BanI G'GyrC_C

Cuts at:      0    1816    2406 
   Size:       1816     590
 
BanII G_rGCy'C

Cuts at:      0     471    1955    2192    2406 
   Size:        471    1484     237     214

  Fragments arranged by size: 

                1484     471     237     214
 
BbsI GAAGACnn'nnnn_

Cuts at:      0     184    2321    2406 
   Size:        184    2137      85

  Fragments arranged by size: 

                2137     184      85
 
BclI T'GATC_A

Cuts at:      0      14    1736    2406 
   Size:         14    1722     670

  Fragments arranged by size: 

                1722     670      14
 
BfrBI ATG'CAT

Cuts at:      0    1611    2406 
   Size:       1611     795
 
BglI GCCn_nnn'nGGC

Cuts at:      0     475    2044    2125    2406 
   Size:        475    1569      81     281

  Fragments arranged by size: 

                1569     475     281      81
 
BglII A'GATC_T

Cuts at:      0     754    1629    2406 
   Size:        754     875     777

  Fragments arranged by size: 

                 875     777     754
 
BmgBI CAC'GTC

Cuts at:      0     961    2406 
   Size:        961    1445
 
BmrI ACTGGGnnnn_n'

Cuts at:      0     276    2406 
   Size:        276    2130
 
BplI GAGnnnnnCTCnnnnnnnn_nnnnn'

Cuts at:      0    1441    2406 
   Size:       1441     965
 
BpmI CTGGAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     395     904    2398    2406 
   Size:        395     509    1494       8

  Fragments arranged by size: 

                1494     509     395       8
 
BpuEI CTTGAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     466    1941    2248    2406 
   Size:        466    1475     307     158

  Fragments arranged by size: 

                1475     466     307     158
 
BsaAI yAC'GTr

Cuts at:      0    1392    2406 
   Size:       1392    1014
 
BsaBI GATnn'nnATC

Cuts at:      0     389    2406 
   Size:        389    2017
 
BsaHI Gr'CG_yC

Cuts at:      0     540    2406 
   Size:        540    1866
 
BsaXI ACnnnnnCTCCnnnnnnn_nnn'

Cuts at:      0     240     270    2406 
   Size:        240      30    2136

  Fragments arranged by size: 

                2136     240      30
 
BseRI GAGGAGnnnnnnnn_nn'

Cuts at:      0     632    1316    2406 
   Size:        632     684    1090

  Fragments arranged by size: 

                1090     684     632
 
BsgI GTGCAGnnnnnnnnnnnnnn_nn'

Cuts at:      0    1930    2406 
   Size:       1930     476
 
BsiHKAI G_wGCw'C

Cuts at:      0    1835    1955    2406 
   Size:       1835     120     451

  Fragments arranged by size: 

                1835     451     120
 
BsmI GAATG_Cn'

Cuts at:      0    1613    1993    2406 
   Size:       1613     380     413

  Fragments arranged by size: 

                1613     413     380
 
Bsp1286I G_dGCh'C

Cuts at:      0     471    1835    1955    2192    2406 
   Size:        471    1364     120     237     214

  Fragments arranged by size: 

                1364     471     237     214     120
 
BspHI T'CATG_A

Cuts at:      0    2192    2406 
   Size:       2192     214
 
BsrDI GCAATG_nn'

Cuts at:      0     106     251    1156    2406 
   Size:        106     145     905    1250

  Fragments arranged by size: 

                1250     905     145     106
 
BsrGI T'GTAC_A

Cuts at:      0    1203    2406 
   Size:       1203    1203
 
BssSI C'ACGA_G

Cuts at:      0    2177    2406 
   Size:       2177     229
 
BstEII G'GTnAC_C

Cuts at:      0    2167    2406 
   Size:       2167     239
 
BstXI CCAn_nnnn'nTGG

Cuts at:      0     242    2406 
   Size:        242    2164
 
BstYI r'GATC_y

Cuts at:      0     162     384     735     754    1629    2406 
   Size:        162     222     351      19     875     777

  Fragments arranged by size: 

                 875     777     351     222     162      19
 
BtgI C'CryG_G

Cuts at:      0    1944    2406 
   Size:       1944     462
 
BtsI GCAGTG_nn'

Cuts at:      0     139    2406 
   Size:        139    2267
 
DraI TTT'AAA

Cuts at:      0    2393    2406 
   Size:       2393      13
 
DrdI GACnn_nn'nnGTC

Cuts at:      0     186    2394    2406 
   Size:        186    2208      12

  Fragments arranged by size: 

                2208     186      12
 
EaeI y'GGCC_r

Cuts at:      0     221    2406 
   Size:        221    2185
 
EarI CTCTTCn'nnn_

Cuts at:      0     194     332     558     607     765    1334    1874    2406 
   Size:        194     138     226      49     158     569     540     532

  Fragments arranged by size: 

                 569     540     532     226     194     158     138      49
            
 
EcoICRI GAG'CTC

Cuts at:      0    1953    2406 
   Size:       1953     453
 
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     395     479     904    1280    2398    2406 
   Size:        395      84     425     376    1118       8

  Fragments arranged by size: 

                1118     425     395     376      84       8
 
EcoRI G'AATT_C

Cuts at:      0    1082    2406 
   Size:       1082    1324
 
FalI AAGnnnnnCTTnnnnnnnn_nnnnn'

Cuts at:      0    1162    1982    2406 
   Size:       1162     820     424

  Fragments arranged by size: 

                1162     820     424
 
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'

Cuts at:      0     222     240     254     272     739     771     811     843 
   Size:        222      18      14      18     467      32      40      32

Cuts at:    843    2406 
   Size:       1563

  Fragments arranged by size: 

                1563     467     222      40      32      32      18      18
                  14
 
HindIII A'AGCT_T

Cuts at:      0    1964    2406 
   Size:       1964     442
 
KpnI G_GTAC'C

Cuts at:      0    1820    2406 
   Size:       1820     586
 
MfeI C'AATT_G

Cuts at:      0     422     523    2406 
   Size:        422     101    1883

  Fragments arranged by size: 

                1883     422     101
 
MscI TGG'CCA

Cuts at:      0     223    2406 
   Size:        223    2183
 
MslI CAynn'nnrTG

Cuts at:      0    1120    1166    1772    2360    2406 
   Size:       1120      46     606     588      46

  Fragments arranged by size: 

                1120     606     588      46      46
 
MspA1I CmG'CkG

Cuts at:      0      64     580    2406 
   Size:         64     516    1826

  Fragments arranged by size: 

                1826     516      64
 
NcoI C'CATG_G

Cuts at:      0    1944    2406 
   Size:       1944     462
 
NsiI A_TGCA'T

Cuts at:      0    1613    2406 
   Size:       1613     793
 
PflMI CCAn_nnn'nTGG

Cuts at:      0     265    2406 
   Size:        265    2141
 
PfoI T'CCnGG_A

Cuts at:      0     920    2406 
   Size:        920    1486
 
PsiI TTA'TAA

Cuts at:      0     629    1970    2406 
   Size:        629    1341     436

  Fragments arranged by size: 

                1341     629     436
 
PstI C_TGCA'G

Cuts at:      0    1091    2406 
   Size:       1091    1315
 
PvuII CAG'CTG

Cuts at:      0     580    2406 
   Size:        580    1826
 
SacI G_AGCT'C

Cuts at:      0    1955    2406 
   Size:       1955     451
 
SapI GCTCTTCn'nnn_

Cuts at:      0    1874    2406 
   Size:       1874     532
 
ScaI AGT'ACT

Cuts at:      0     887    2406 
   Size:        887    1519
 
SexAI A'CCwGG_T

Cuts at:      0    1973    2406 
   Size:       1973     433
 
SfcI C'TryA_G

Cuts at:      0    1087    1374    1805    1992    2406 
   Size:       1087     287     431     187     414

  Fragments arranged by size: 

                1087     431     414     287     187
 
SmlI C'TyrA_G

Cuts at:      0     445    1956    2086    2263    2406 
   Size:        445    1511     130     177     143

  Fragments arranged by size: 

                1511     445     177     143     130
 
SpeI A'CTAG_T

Cuts at:      0     844     882    2406 
   Size:        844      38    1524

  Fragments arranged by size: 

                1524     844      38
 
StyI C'CwwG_G

Cuts at:      0     663    1944    2406 
   Size:        663    1281     462

  Fragments arranged by size: 

                1281     663     462
 
TatI w'GTAC_w

Cuts at:      0     885    1003    1019    1203    2406 
   Size:        885     118      16     184    1203

  Fragments arranged by size: 

                1203     885     184     118      16
 
XcmI CCAnnnn_n'nnnnTGG

Cuts at:      0     471    2406 
   Size:        471    1935
 
XhoI C'TCGA_G

Cuts at:      0    2086    2406 
   Size:       2086     320
 
XmnI GAAnn'nnTTC

Cuts at:      0     305    1475    1661    2318    2406 
   Size:        305    1170     186     657      88

  Fragments arranged by size: 

                1170     657     305     186      88
 
ZraI GAC'GTC

Cuts at:      0     541    2406 
   Size:        541    1865
 

 Enzymes that do cut:

    AatII   Acc65I     AcuI     AleI     AlfI     ApoI     AseI     AvaI
    BamHI     BanI    BanII     BbsI     BclI    BfrBI     BglI    BglII
    BmgBI     BmrI     BplI     BpmI    BpuEI    BsaAI    BsaBI    BsaHI
    BsaXI    BseRI     BsgI  BsiHKAI     BsmI Bsp1286I    BspHI    BsrDI
    BsrGI    BssSI   BstEII    BstXI    BstYI     BtgI     BtsI     DraI
     DrdI     EaeI     EarI  EcoICRI  Eco57MI    EcoRI     FalI    Hin4I
  HindIII     KpnI     MfeI     MscI     MslI   MspA1I     NcoI     NsiI
    PflMI     PfoI     PsiI     PstI    PvuII     SacI     SapI     ScaI
    SexAI     SfcI     SmlI     SpeI     StyI     TatI     XcmI     XhoI
     XmnI     ZraI

 Enzymes that do not cut: 

     AarI     AccI     AclI     AfeI    AflII   AflIII     AgeI     AhdI
     AloI    AlwNI     ApaI    ApaLI     AscI    AsiSI    AvrII     BaeI
     BbeI    BbvCI     BcgI    BciVI     BlpI Bme1580I     BmtI   Bpu10I
     BsaI    BsaWI    BseYI    BsiEI    BsiWI    BsmBI    BspEI    BspMI
    BsrBI    BsrFI   BssHII   BstAPI    BstBI  BstZ17I   Bsu36I    BtgZI
     ClaI    CspCI   DraIII     EagI     EciI    EcoNI EcoO109I    EcoRV
     FseI     FspI    FspAI    HaeII   HincII     HpaI     KasI     MluI
     MmeI     NaeI     NarI     NdeI   NgoMIV     NheI     NotI     NruI
     NspI     PacI     PasI     PciI     PmeI     PmlI     PpiI    PpuMI
    PshAI   PspOMI    PspXI     PsrI     PvuI    RsrII    SacII     SalI
    SanDI     SbfI     SfiI     SfoI     SgfI    SgrAI     SmaI    SnaBI
     SphI     SrfI     SspI     StuI     SwaI    TaqII     TstI  Tth111I
     XbaI     XmaI
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