FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8312, 142 aa 1>>>pF1KB8312 142 - 142 aa - 142 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0903+/-0.000256; mu= 13.5104+/- 0.016 mean_var=70.6096+/-13.768, 0's: 0 Z-trim(120.9): 35 B-trim: 0 in 0/57 Lambda= 0.152631 statistics sampled from 36774 (36809) to 36774 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.805), E-opt: 0.2 (0.432), width: 16 Scan time: 4.690 The best scores are: opt bits E(85289) NP_001159 (OMIM: 603352) baculoviral IAP repeat-co ( 142) 996 227.1 7.3e-60 NP_001012271 (OMIM: 603352) baculoviral IAP repeat ( 165) 575 134.5 6.6e-32 NP_001012270 (OMIM: 603352) baculoviral IAP repeat ( 137) 574 134.2 6.6e-32 NP_004527 (OMIM: 600355) baculoviral IAP repeat-co (1403) 213 55.5 3.4e-07 XP_016860049 (OMIM: 605638) PREDICTED: baculoviral (3983) 215 56.2 5.7e-07 XP_011531307 (OMIM: 605638) PREDICTED: baculoviral (3989) 215 56.2 5.7e-07 XP_016860048 (OMIM: 605638) PREDICTED: baculoviral (4715) 215 56.3 6.5e-07 XP_011531305 (OMIM: 605638) PREDICTED: baculoviral (4779) 215 56.3 6.6e-07 XP_016860047 (OMIM: 605638) PREDICTED: baculoviral (4837) 215 56.3 6.6e-07 XP_005264512 (OMIM: 605638) PREDICTED: baculoviral (4840) 215 56.3 6.6e-07 XP_005264511 (OMIM: 605638) PREDICTED: baculoviral (4847) 215 56.3 6.6e-07 XP_016860046 (OMIM: 605638) PREDICTED: baculoviral (4847) 215 56.3 6.6e-07 XP_006712119 (OMIM: 605638) PREDICTED: baculoviral (4851) 215 56.3 6.6e-07 NP_057336 (OMIM: 605638) baculoviral IAP repeat-co (4857) 215 56.3 6.7e-07 XP_016860045 (OMIM: 605638) PREDICTED: baculoviral (4858) 215 56.3 6.7e-07 XP_005264510 (OMIM: 605638) PREDICTED: baculoviral (4861) 215 56.3 6.7e-07 XP_006712118 (OMIM: 605638) PREDICTED: baculoviral (4864) 215 56.3 6.7e-07 XP_005264509 (OMIM: 605638) PREDICTED: baculoviral (4870) 215 56.3 6.7e-07 XP_005264508 (OMIM: 605638) PREDICTED: baculoviral (4875) 215 56.3 6.7e-07 XP_006712117 (OMIM: 605638) PREDICTED: baculoviral (4878) 215 56.3 6.7e-07 XP_005264507 (OMIM: 605638) PREDICTED: baculoviral (4880) 215 56.3 6.7e-07 XP_005264506 (OMIM: 605638) PREDICTED: baculoviral (4884) 215 56.3 6.7e-07 NP_071444 (OMIM: 605737) baculoviral IAP repeat-co ( 280) 187 49.2 5.2e-06 NP_647478 (OMIM: 605737) baculoviral IAP repeat-co ( 298) 187 49.2 5.5e-06 NP_001243095 (OMIM: 601712) baculoviral IAP repeat ( 569) 172 46.1 8.9e-05 NP_001243092 (OMIM: 601712) baculoviral IAP repeat ( 618) 172 46.2 9.5e-05 NP_001157 (OMIM: 601712) baculoviral IAP repeat-co ( 618) 172 46.2 9.5e-05 NP_001158 (OMIM: 300079,300635,308240) E3 ubiquiti ( 497) 167 45.0 0.00017 XP_011529631 (OMIM: 300079,300635,308240) PREDICTE ( 497) 167 45.0 0.00017 XP_006724817 (OMIM: 300079,300635,308240) PREDICTE ( 497) 167 45.0 0.00017 NP_001191330 (OMIM: 300079,300635,308240) E3 ubiqu ( 497) 167 45.0 0.00017 NP_075043 (OMIM: 600355) baculoviral IAP repeat-co (1241) 170 45.9 0.00022 NP_001156 (OMIM: 601721) baculoviral IAP repeat-co ( 604) 163 44.2 0.00037 NP_892007 (OMIM: 601721) baculoviral IAP repeat-co ( 604) 163 44.2 0.00037 XP_016873132 (OMIM: 601721) PREDICTED: baculoviral ( 604) 163 44.2 0.00037 >>NP_001159 (OMIM: 603352) baculoviral IAP repeat-contai (142 aa) initn: 996 init1: 996 opt: 996 Z-score: 1195.8 bits: 227.1 E(85289): 7.3e-60 Smith-Waterman score: 996; 99.3% identity (100.0% similar) in 142 aa overlap (1-142:1-142) 10 20 30 40 50 60 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 FKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNK 70 80 90 100 110 120 130 140 pF1KB8 KKEFEETAKKVRRAIEQLAAMD ::::::::.::::::::::::: NP_001 KKEFEETAEKVRRAIEQLAAMD 130 140 >>NP_001012271 (OMIM: 603352) baculoviral IAP repeat-con (165 aa) initn: 982 init1: 575 opt: 575 Z-score: 693.8 bits: 134.5 E(85289): 6.6e-32 Smith-Waterman score: 940; 85.5% identity (86.1% similar) in 165 aa overlap (1-142:1-165) 10 20 30 40 50 60 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 10 20 30 40 50 60 70 80 90 pF1KB8 FKELEGWEPDDDPI-----------------------EEHKKHSSGCAFLSVKKQFEELT :::::::::::::: ::::::::::::::::::::::: NP_001 FKELEGWEPDDDPIGPGTVAYACNTSTLGGRGGRITREEHKKHSSGCAFLSVKKQFEELT 70 80 90 100 110 120 100 110 120 130 140 pF1KB8 LGEFLKLDRERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAAMD :::::::::::::::::::::::::::::::.::::::::::::: NP_001 LGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQLAAMD 130 140 150 160 >>NP_001012270 (OMIM: 603352) baculoviral IAP repeat-con (137 aa) initn: 574 init1: 574 opt: 574 Z-score: 693.8 bits: 134.2 E(85289): 6.6e-32 Smith-Waterman score: 574; 97.3% identity (100.0% similar) in 75 aa overlap (1-75:1-75) 10 20 30 40 50 60 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 FKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNK :::::::::::::.. NP_001 FKELEGWEPDDDPMQRKPTIRRKNLRKLRRKCAVPSSSWLPWIEASGRSCLVPEWLHHFQ 70 80 90 100 110 120 >>NP_004527 (OMIM: 600355) baculoviral IAP repeat-contai (1403 aa) initn: 238 init1: 136 opt: 213 Z-score: 250.1 bits: 55.5 E(85289): 3.4e-07 Smith-Waterman score: 213; 40.5% identity (63.1% similar) in 84 aa overlap (15-97:159-237) 10 20 30 40 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPF-LEGCACTPERMAEAGF .. :...:.:::: ..: .: ..:::: NP_004 NKDVGNIAKYDIRVKNLKSRLRGGKMRYQEEEARLASFRNWPFYVQGI--SPCVLSEAGF 130 140 150 160 170 180 50 60 70 80 90 100 pF1KB8 IHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLK . .. : .::: : : .:: ::: .:: : : :: ::. ::.: NP_004 VFT---GKQDTVQCFSCGGCLGNWEEGDDPWKEHAKWFPKCEFLRSKKSSEEITQYIQSY 190 200 210 220 230 240 110 120 130 140 pF1KB8 LDRERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAAMD NP_004 KGFVDITGEHFVNSWVQRELPMASAYCNDSIFAYEELRLDSFKDWPRESAVGVAALAKAG 250 260 270 280 290 300 >-- initn: 182 init1: 125 opt: 170 Z-score: 198.9 bits: 46.0 E(85289): 0.00024 Smith-Waterman score: 170; 33.8% identity (61.2% similar) in 80 aa overlap (18-97:281-355) 10 20 30 40 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCP :...::.:: . : .:.::... NP_004 GEHFVNSWVQRELPMASAYCNDSIFAYEELRLDSFKDWP--RESAVGVAALAKAGLFYTG 260 270 280 290 300 50 60 70 80 90 100 pF1KB8 TENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRE . :..::: : :: :. :::...: . .: ::. :. :.: NP_004 IK---DIVQCFSCGGCLEKWQEGDDPLDDHTRCFPNCPFLQNMKSSAEVTPDLQSRGELC 310 320 330 340 350 360 110 120 130 140 pF1KB8 RAKNKIAKETNNKKKEFEETAKKVRRAIEQLAAMD NP_004 ELLETTSESNLEDSIAVGPIVPEMAQGEAQWFQEAKNLNEQLRAAYTSASFRHMSLLDIS 370 380 390 400 410 420 >>XP_016860049 (OMIM: 605638) PREDICTED: baculoviral IAP (3983 aa) initn: 212 init1: 212 opt: 215 Z-score: 246.1 bits: 56.2 E(85289): 5.7e-07 Smith-Waterman score: 215; 42.3% identity (60.6% similar) in 71 aa overlap (17-87:288-358) 10 20 30 40 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHC .: :: .:: . :. ::.::: : XP_016 RLSYLLPSARPELGVGPGRSVDRSLMYSEANRRETFTSWPHVGYRWAQPDPMAQAGFYHQ 260 270 280 290 300 310 50 60 70 80 90 100 pF1KB8 PTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDR :. . : :.:: : : ::: :.: ::..:: .: :. XP_016 PASSGDDRAMCFTCSVCLVCWEPTDEPWSEHERHSPNCPFVKGEHTQNVPLSVTLATSPA 320 330 340 350 360 370 110 120 130 140 pF1KB8 ERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAAMD XP_016 QFPCTDGTDRISCFGSGSCPHFLAAATKRGKICIWDVSKLMKVHLKFEINAYDPAIVQQL 380 390 400 410 420 430 >>XP_011531307 (OMIM: 605638) PREDICTED: baculoviral IAP (3989 aa) initn: 212 init1: 212 opt: 215 Z-score: 246.1 bits: 56.2 E(85289): 5.7e-07 Smith-Waterman score: 215; 42.3% identity (60.6% similar) in 71 aa overlap (17-87:288-358) 10 20 30 40 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHC .: :: .:: . :. ::.::: : XP_011 RLSYLLPSARPELGVGPGRSVDRSLMYSEANRRETFTSWPHVGYRWAQPDPMAQAGFYHQ 260 270 280 290 300 310 50 60 70 80 90 100 pF1KB8 PTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDR :. . : :.:: : : ::: :.: ::..:: .: :. XP_011 PASSGDDRAMCFTCSVCLVCWEPTDEPWSEHERHSPNCPFVKGEHTQNVPLSVTLATSPA 320 330 340 350 360 370 110 120 130 140 pF1KB8 ERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAAMD XP_011 QFPCTDGTDRISCFGSGSCPHFLAAATKRGKICIWDVSKLMKVHLKFEINAYDPAIVQQL 380 390 400 410 420 430 >>XP_016860048 (OMIM: 605638) PREDICTED: baculoviral IAP (4715 aa) initn: 212 init1: 212 opt: 215 Z-score: 245.1 bits: 56.3 E(85289): 6.5e-07 Smith-Waterman score: 215; 42.3% identity (60.6% similar) in 71 aa overlap (17-87:288-358) 10 20 30 40 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHC .: :: .:: . :. ::.::: : XP_016 RLSYLLPSARPELGVGPGRSVDRSLMYSEANRRETFTSWPHVGYRWAQPDPMAQAGFYHQ 260 270 280 290 300 310 50 60 70 80 90 100 pF1KB8 PTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDR :. . : :.:: : : ::: :.: ::..:: .: :. XP_016 PASSGDDRAMCFTCSVCLVCWEPTDEPWSEHERHSPNCPFVKGEHTQNVPLSVTLATSPA 320 330 340 350 360 370 110 120 130 140 pF1KB8 ERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAAMD XP_016 QFPCTDGTDRISCFGSGSCPHFLAAATKRGKICIWDVSKLMKVHLKFEINAYDPAIVQQL 380 390 400 410 420 430 >>XP_011531305 (OMIM: 605638) PREDICTED: baculoviral IAP (4779 aa) initn: 212 init1: 212 opt: 215 Z-score: 245.0 bits: 56.3 E(85289): 6.6e-07 Smith-Waterman score: 215; 42.3% identity (60.6% similar) in 71 aa overlap (17-87:183-253) 10 20 30 40 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHC .: :: .:: . :. ::.::: : XP_011 RLSYLLPSARPELGVGPGRSVDRSLMYSEANRRETFTSWPHVGYRWAQPDPMAQAGFYHQ 160 170 180 190 200 210 50 60 70 80 90 100 pF1KB8 PTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDR :. . : :.:: : : ::: :.: ::..:: .: :. XP_011 PASSGDDRAMCFTCSVCLVCWEPTDEPWSEHERHSPNCPFVKGEHTQNVPLSVTLATSPA 220 230 240 250 260 270 110 120 130 140 pF1KB8 ERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAAMD XP_011 QFPCTDGTDRISCFGSGSCPHFLAAATKRGKICIWDVSKLMKVHLKFEINAYDPAIVQQL 280 290 300 310 320 330 >>XP_016860047 (OMIM: 605638) PREDICTED: baculoviral IAP (4837 aa) initn: 212 init1: 212 opt: 215 Z-score: 244.9 bits: 56.3 E(85289): 6.6e-07 Smith-Waterman score: 215; 42.3% identity (60.6% similar) in 71 aa overlap (17-87:288-358) 10 20 30 40 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHC .: :: .:: . :. ::.::: : XP_016 RLSYLLPSARPELGVGPGRSVDRSLMYSEANRRETFTSWPHVGYRWAQPDPMAQAGFYHQ 260 270 280 290 300 310 50 60 70 80 90 100 pF1KB8 PTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDR :. . : :.:: : : ::: :.: ::..:: .: :. XP_016 PASSGDDRAMCFTCSVCLVCWEPTDEPWSEHERHSPNCPFVKGEHTQNVPLSVTLATSPA 320 330 340 350 360 370 110 120 130 140 pF1KB8 ERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAAMD XP_016 QFPCTDGTDRISCFGSGSCPHFLAAATKRGKICIWDVSKLMKVHLKFEINAYDPAIVQQL 380 390 400 410 420 430 >>XP_005264512 (OMIM: 605638) PREDICTED: baculoviral IAP (4840 aa) initn: 212 init1: 212 opt: 215 Z-score: 244.9 bits: 56.3 E(85289): 6.6e-07 Smith-Waterman score: 215; 42.3% identity (60.6% similar) in 71 aa overlap (17-87:288-358) 10 20 30 40 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHC .: :: .:: . :. ::.::: : XP_005 RLSYLLPSARPELGVGPGRSVDRSLMYSEANRRETFTSWPHVGYRWAQPDPMAQAGFYHQ 260 270 280 290 300 310 50 60 70 80 90 100 pF1KB8 PTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDR :. . : :.:: : : ::: :.: ::..:: .: :. XP_005 PASSGDDRAMCFTCSVCLVCWEPTDEPWSEHERHSPNCPFVKGEHTQNVPLSVTLATSPA 320 330 340 350 360 370 110 120 130 140 pF1KB8 ERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAAMD XP_005 QFPCTDGTDRISCFGSGSCPHFLAAATKRGKICIWDVSKLMKVHLKFEINAYDPAIVQQL 380 390 400 410 420 430 142 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:14:40 2016 done: Mon Nov 7 04:14:40 2016 Total Scan time: 4.690 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]