FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8312, 142 aa 1>>>pF1KB8312 142 - 142 aa - 142 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3737+/-0.000557; mu= 11.7281+/- 0.034 mean_var=71.3882+/-14.059, 0's: 0 Z-trim(113.8): 18 B-trim: 0 in 0/53 Lambda= 0.151796 statistics sampled from 14351 (14367) to 14351 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.811), E-opt: 0.2 (0.441), width: 16 Scan time: 1.820 The best scores are: opt bits E(32554) CCDS11755.1 BIRC5 gene_id:332|Hs108|chr17 ( 142) 996 226.0 6e-60 CCDS32752.1 BIRC5 gene_id:332|Hs108|chr17 ( 165) 575 133.9 3.8e-32 CCDS32751.1 BIRC5 gene_id:332|Hs108|chr17 ( 137) 574 133.6 3.8e-32 >>CCDS11755.1 BIRC5 gene_id:332|Hs108|chr17 (142 aa) initn: 996 init1: 996 opt: 996 Z-score: 1189.8 bits: 226.0 E(32554): 6e-60 Smith-Waterman score: 996; 99.3% identity (100.0% similar) in 142 aa overlap (1-142:1-142) 10 20 30 40 50 60 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 FKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 FKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNK 70 80 90 100 110 120 130 140 pF1KB8 KKEFEETAKKVRRAIEQLAAMD ::::::::.::::::::::::: CCDS11 KKEFEETAEKVRRAIEQLAAMD 130 140 >>CCDS32752.1 BIRC5 gene_id:332|Hs108|chr17 (165 aa) initn: 982 init1: 575 opt: 575 Z-score: 690.6 bits: 133.9 E(32554): 3.8e-32 Smith-Waterman score: 940; 85.5% identity (86.1% similar) in 165 aa overlap (1-142:1-165) 10 20 30 40 50 60 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 10 20 30 40 50 60 70 80 90 pF1KB8 FKELEGWEPDDDPI-----------------------EEHKKHSSGCAFLSVKKQFEELT :::::::::::::: ::::::::::::::::::::::: CCDS32 FKELEGWEPDDDPIGPGTVAYACNTSTLGGRGGRITREEHKKHSSGCAFLSVKKQFEELT 70 80 90 100 110 120 100 110 120 130 140 pF1KB8 LGEFLKLDRERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAAMD :::::::::::::::::::::::::::::::.::::::::::::: CCDS32 LGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQLAAMD 130 140 150 160 >>CCDS32751.1 BIRC5 gene_id:332|Hs108|chr17 (137 aa) initn: 574 init1: 574 opt: 574 Z-score: 690.6 bits: 133.6 E(32554): 3.8e-32 Smith-Waterman score: 574; 97.3% identity (100.0% similar) in 75 aa overlap (1-75:1-75) 10 20 30 40 50 60 pF1KB8 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 FKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNK :::::::::::::.. CCDS32 FKELEGWEPDDDPMQRKPTIRRKNLRKLRRKCAVPSSSWLPWIEASGRSCLVPEWLHHFQ 70 80 90 100 110 120 142 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 04:14:39 2016 done: Mon Nov 7 04:14:39 2016 Total Scan time: 1.820 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]