Result of FASTA (ccds) for
pFN21AB6228
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6228, 740 aa
1>>>pF1KB6228 740 - 740 aa - 740 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.2177+/-0.000978; mu= -0.2933+/- 0.059
mean_var=340.1192+/-68.862, 0's: 0 Z-trim(115.6): 22 B-trim: 440 in 1/54
Lambda= 0.069544
statistics sampled from 16174 (16195) to 16174 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.784), E-opt: 0.2 (0.497), width: 16
Scan time: 5.100
The best scores are: opt bits E(32554)
CCDS4776.1 DAXX gene_id:1616|Hs108|chr6 ( 740) 4869 502.7 8.6e-142
CCDS59008.1 DAXX gene_id:1616|Hs108|chr6 ( 665) 4365 452.1 1.3e-126
>>CCDS4776.1 DAXX gene_id:1616|Hs108|chr6 (740 aa)
initn: 4869 init1: 4869 opt: 4869 Z-score: 2659.1 bits: 502.7 E(32554): 8.6e-142
Smith-Waterman score: 4869; 100.0% identity (100.0% similar) in 740 aa overlap (1-740:1-740)
10 20 30 40 50 60
pF1KB6 MATANSIIVLDDDDEDEAAAQPGPSHPLPNAASPGAEAPSSSEPHGARGSSSSGGKKCYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MATANSIIVLDDDDEDEAAAQPGPSHPLPNAASPGAEAPSSSEPHGARGSSSSGGKKCYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 LENEKLFEEFLELCKMQTADHPEVVPFLYNRQQRAHSLFLASAEFCNILSRVLSRARSRP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LENEKLFEEFLELCKMQTADHPEVVPFLYNRQQRAHSLFLASAEFCNILSRVLSRARSRP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 AKLYVYINELCTVLKAHSAKKKLNLAPAATTSNEPSGNNPPTHLSLDPTNAENTASQSPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AKLYVYINELCTVLKAHSAKKKLNLAPAATTSNEPSGNNPPTHLSLDPTNAENTASQSPR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 TRGSRRQIQRLEQLLALYVAEIRRLQEKELDLSELDDPDSAYLQEARLKRKLIRLFGRLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TRGSRRQIQRLEQLLALYVAEIRRLQEKELDLSELDDPDSAYLQEARLKRKLIRLFGRLC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 ELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKPGPDTFPDYGDVLRAVEKAAARH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKPGPDTFPDYGDVLRAVEKAAARH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 SLGLPRQQLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPVLARR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SLGLPRQQLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPVLARR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB6 LRENRSLAMSRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LRENRSLAMSRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHSADTPEASLDSGEGPS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB6 GMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB6 DEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB6 SSIDAESNGEQPEELTLEEESPVSQLFELEIEALPLDTPSSVETDISSSRKQSEEPFTTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SSIDAESNGEQPEELTLEEESPVSQLFELEIEALPLDTPSSVETDISSSRKQSEEPFTTV
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB6 LENGAGMVSSTSFNGGVSPHNWGDSGPPCKKSRKEKKQTGSGPLGNSYVERQRSVHEKNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LENGAGMVSSTSFNGGVSPHNWGDSGPPCKKSRKEKKQTGSGPLGNSYVERQRSVHEKNG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB6 KKICTLPSPPSPLASLAPVADSSTRVDSPSHGLVTSSLCIPSPARLSQTPHSQPPRPGTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KKICTLPSPPSPLASLAPVADSSTRVDSPSHGLVTSSLCIPSPARLSQTPHSQPPRPGTC
670 680 690 700 710 720
730 740
pF1KB6 KTSVATQCDPEEIIVLSDSD
::::::::::::::::::::
CCDS47 KTSVATQCDPEEIIVLSDSD
730 740
>>CCDS59008.1 DAXX gene_id:1616|Hs108|chr6 (665 aa)
initn: 4365 init1: 4365 opt: 4365 Z-score: 2386.4 bits: 452.1 E(32554): 1.3e-126
Smith-Waterman score: 4365; 100.0% identity (100.0% similar) in 665 aa overlap (76-740:1-665)
50 60 70 80 90 100
pF1KB6 GARGSSSSGGKKCYKLENEKLFEEFLELCKMQTADHPEVVPFLYNRQQRAHSLFLASAEF
::::::::::::::::::::::::::::::
CCDS59 MQTADHPEVVPFLYNRQQRAHSLFLASAEF
10 20 30
110 120 130 140 150 160
pF1KB6 CNILSRVLSRARSRPAKLYVYINELCTVLKAHSAKKKLNLAPAATTSNEPSGNNPPTHLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 CNILSRVLSRARSRPAKLYVYINELCTVLKAHSAKKKLNLAPAATTSNEPSGNNPPTHLS
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB6 LDPTNAENTASQSPRTRGSRRQIQRLEQLLALYVAEIRRLQEKELDLSELDDPDSAYLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LDPTNAENTASQSPRTRGSRRQIQRLEQLLALYVAEIRRLQEKELDLSELDDPDSAYLQE
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB6 ARLKRKLIRLFGRLCELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKPGPDTFPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ARLKRKLIRLFGRLCELKDCSSLTGRVIEQRIPYRGTRYPEVNRRIERLINKPGPDTFPD
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB6 YGDVLRAVEKAAARHSLGLPRQQLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 YGDVLRAVEKAAARHSLGLPRQQLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYR
220 230 240 250 260 270
350 360 370 380 390 400
pF1KB6 PGVDPALSDPVLARRLRENRSLAMSRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 PGVDPALSDPVLARRLRENRSLAMSRLDEVISKYAMLQDKSEEGERKKRRARLQGTSSHS
280 290 300 310 320 330
410 420 430 440 450 460
pF1KB6 ADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEE
340 350 360 370 380 390
470 480 490 500 510 520
pF1KB6 DLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 DLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKG
400 410 420 430 440 450
530 540 550 560 570 580
pF1KB6 RIVSPSLLSEEPLAPSSIDAESNGEQPEELTLEEESPVSQLFELEIEALPLDTPSSVETD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 RIVSPSLLSEEPLAPSSIDAESNGEQPEELTLEEESPVSQLFELEIEALPLDTPSSVETD
460 470 480 490 500 510
590 600 610 620 630 640
pF1KB6 ISSSRKQSEEPFTTVLENGAGMVSSTSFNGGVSPHNWGDSGPPCKKSRKEKKQTGSGPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ISSSRKQSEEPFTTVLENGAGMVSSTSFNGGVSPHNWGDSGPPCKKSRKEKKQTGSGPLG
520 530 540 550 560 570
650 660 670 680 690 700
pF1KB6 NSYVERQRSVHEKNGKKICTLPSPPSPLASLAPVADSSTRVDSPSHGLVTSSLCIPSPAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 NSYVERQRSVHEKNGKKICTLPSPPSPLASLAPVADSSTRVDSPSHGLVTSSLCIPSPAR
580 590 600 610 620 630
710 720 730 740
pF1KB6 LSQTPHSQPPRPGTCKTSVATQCDPEEIIVLSDSD
:::::::::::::::::::::::::::::::::::
CCDS59 LSQTPHSQPPRPGTCKTSVATQCDPEEIIVLSDSD
640 650 660
740 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 14:17:56 2016 done: Sat Nov 5 14:17:57 2016
Total Scan time: 5.100 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]