Result of FASTA (omim) for pFN21AB5443
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5443, 193 aa
  1>>>pF1KB5443 193 - 193 aa - 193 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2084+/-0.000393; mu= 12.5359+/- 0.024
 mean_var=55.6724+/-11.106, 0's: 0 Z-trim(111.1): 105  B-trim: 0 in 0/53
 Lambda= 0.171891
 statistics sampled from 19438 (19547) to 19438 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.608), E-opt: 0.2 (0.229), width:  16
 Scan time:  5.570

The best scores are:                                      opt bits E(85289)
NP_004343 (OMIM: 600432) cerebellin-1 precursor [H ( 193) 1266 322.2 3.3e-88
XP_011524126 (OMIM: 600433) PREDICTED: cerebellin- ( 224)  977 250.5 1.4e-66
XP_016881048 (OMIM: 600433) PREDICTED: cerebellin- ( 224)  977 250.5 1.4e-66
NP_872317 (OMIM: 600433) cerebellin-2 precursor [H ( 224)  977 250.5 1.4e-66
XP_016881049 (OMIM: 600433) PREDICTED: cerebellin- ( 224)  977 250.5 1.4e-66
XP_006722457 (OMIM: 600433) PREDICTED: cerebellin- ( 224)  977 250.5 1.4e-66
NP_542184 (OMIM: 615029) cerebellin-4 precursor [H ( 201)  890 229.0   4e-60
NP_001034860 (OMIM: 612978) cerebellin-3 precursor ( 205)  724 187.8   1e-47
XP_016875369 (OMIM: 610375) PREDICTED: caprin-2 is ( 689)  341 93.0 1.2e-18
XP_016875368 (OMIM: 610375) PREDICTED: caprin-2 is ( 738)  341 93.0 1.2e-18
XP_016875367 (OMIM: 610375) PREDICTED: caprin-2 is ( 758)  341 93.0 1.3e-18
XP_016875366 (OMIM: 610375) PREDICTED: caprin-2 is ( 759)  341 93.0 1.3e-18
XP_016875365 (OMIM: 610375) PREDICTED: caprin-2 is ( 773)  341 93.0 1.3e-18
XP_016875363 (OMIM: 610375) PREDICTED: caprin-2 is ( 793)  341 93.0 1.3e-18
NP_001306771 (OMIM: 610375) caprin-2 isoform 5 [Ho ( 793)  341 93.0 1.3e-18
XP_016875350 (OMIM: 610375) PREDICTED: caprin-2 is ( 961)  341 93.0 1.6e-18
XP_016875348 (OMIM: 610375) PREDICTED: caprin-2 is ( 962)  341 93.0 1.6e-18
XP_016875347 (OMIM: 610375) PREDICTED: caprin-2 is (1010)  341 93.1 1.6e-18
XP_016875346 (OMIM: 610375) PREDICTED: caprin-2 is (1010)  341 93.1 1.6e-18
XP_016875345 (OMIM: 610375) PREDICTED: caprin-2 is (1011)  341 93.1 1.6e-18
NP_001306773 (OMIM: 610375) caprin-2 isoform 7 [Ho (1011)  341 93.1 1.6e-18
XP_016875344 (OMIM: 610375) PREDICTED: caprin-2 is (1025)  341 93.1 1.6e-18
XP_016875343 (OMIM: 610375) PREDICTED: caprin-2 is (1042)  341 93.1 1.7e-18
XP_006719207 (OMIM: 610375) PREDICTED: caprin-2 is (1043)  341 93.1 1.7e-18
XP_016875341 (OMIM: 610375) PREDICTED: caprin-2 is (1045)  341 93.1 1.7e-18
XP_016875342 (OMIM: 610375) PREDICTED: caprin-2 is (1045)  341 93.1 1.7e-18
NP_001306775 (OMIM: 610375) caprin-2 isoform 8 [Ho (1046)  341 93.1 1.7e-18
NP_001306774 (OMIM: 610375) caprin-2 isoform 8 [Ho (1046)  341 93.1 1.7e-18
XP_006719205 (OMIM: 610375) PREDICTED: caprin-2 is (1057)  341 93.1 1.7e-18
XP_016875340 (OMIM: 610375) PREDICTED: caprin-2 is (1071)  341 93.1 1.7e-18
NP_076414 (OMIM: 610375) caprin-2 isoform 2 [Homo  (1077)  341 93.1 1.7e-18
XP_006719203 (OMIM: 610375) PREDICTED: caprin-2 is (1091)  341 93.1 1.7e-18
XP_006719202 (OMIM: 610375) PREDICTED: caprin-2 is (1092)  341 93.1 1.7e-18
XP_006719201 (OMIM: 610375) PREDICTED: caprin-2 is (1106)  341 93.1 1.8e-18
NP_001306772 (OMIM: 610375) caprin-2 isoform 6 [Ho (1126)  341 93.1 1.8e-18
NP_001002259 (OMIM: 610375) caprin-2 isoform 1 [Ho (1127)  341 93.1 1.8e-18
NP_001008224 (OMIM: 615229) complement C1q-like pr ( 238)  296 81.7   1e-15
NP_872334 (OMIM: 614330) complement C1q-like prote ( 287)  277 77.0 3.1e-14
NP_001010908 (OMIM: 615227) complement C1q-like pr ( 255)  271 75.5 7.9e-14
NP_006679 (OMIM: 611586) C1q-related factor precur ( 258)  269 75.0 1.1e-13
NP_112207 (OMIM: 612045) complement C1q tumor necr ( 246)  250 70.3 2.8e-12
NP_852100 (OMIM: 612045) complement C1q tumor necr ( 319)  250 70.3 3.6e-12
XP_011536572 (OMIM: 615229) PREDICTED: complement  ( 227)  241 68.0 1.2e-11
XP_016872654 (OMIM: 614911) PREDICTED: complement  ( 329)  203 58.7 1.2e-08
NP_114115 (OMIM: 614911) complement C1q tumor necr ( 329)  203 58.7 1.2e-08
XP_016872655 (OMIM: 614911) PREDICTED: complement  ( 329)  203 58.7 1.2e-08
NP_848635 (OMIM: 614285) complement C1q and tumor  ( 333)  203 58.7 1.2e-08
NP_001290066 (OMIM: 614285) complement C1q and tum ( 333)  203 58.7 1.2e-08
NP_001290067 (OMIM: 614285) complement C1q and tum ( 333)  203 58.7 1.2e-08
NP_001265360 (OMIM: 605670,608752) complement C1q  ( 243)  199 57.6 1.8e-08


>>NP_004343 (OMIM: 600432) cerebellin-1 precursor [Homo   (193 aa)
 initn: 1266 init1: 1266 opt: 1266  Z-score: 1704.7  bits: 322.2 E(85289): 3.3e-88
Smith-Waterman score: 1266; 100.0% identity (100.0% similar) in 193 aa overlap (1-193:1-193)

               10        20        30        40        50        60
pF1KB5 MLGVLELLLLGAAWLAGPARGQNETEPIVLEGKCLVVCDSNPTSDPTGTALGISVRSGSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MLGVLELLLLGAAWLAGPARGQNETEPIVLEGKCLVVCDSNPTSDPTGTALGISVRSGSA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 KVAFSAIRSTNHEPSEMSNRTMIIYFDQVLVNIGNNFDSERSTFIAPRKGIYSFNFHVVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KVAFSAIRSTNHEPSEMSNRTMIIYFDQVLVNIGNNFDSERSTFIAPRKGIYSFNFHVVK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 VYNRQTIQVSLMLNGWPVISAFAGDQDVTREAASNGVLIQMEKGDRAYLKLERGNLMGGW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VYNRQTIQVSLMLNGWPVISAFAGDQDVTREAASNGVLIQMEKGDRAYLKLERGNLMGGW
              130       140       150       160       170       180

              190   
pF1KB5 KYSTFSGFLVFPL
       :::::::::::::
NP_004 KYSTFSGFLVFPL
              190   

>>XP_011524126 (OMIM: 600433) PREDICTED: cerebellin-2 is  (224 aa)
 initn: 978 init1: 819 opt: 977  Z-score: 1316.3  bits: 250.5 E(85289): 1.4e-66
Smith-Waterman score: 977; 79.8% identity (88.6% similar) in 193 aa overlap (2-193:32-224)

                                            10        20        30 
pF1KB5                              MLGVLELLLLGAAWLAGPARGQNETEPIVLE
                                     :::   :::       :.:.::.:::::::
XP_011 QAPGRGPLGLRLMMPGRRGALREPGGCGSCLGVALALLLLLLPACCPVRAQNDTEPIVLE
              10        20        30        40        50        60 

              40        50         60        70        80        90
pF1KB5 GKCLVVCDSNPTSDPTGTA-LGISVRSGSAKVAFSAIRSTNHEPSEMSNRTMIIYFDQVL
       :::::::::.:..: . :. :::::::::::::::: ::::::::::::::: :::::::
XP_011 GKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVL
              70        80        90       100       110       120 

              100       110       120       130       140       150
pF1KB5 VNIGNNFDSERSTFIAPRKGIYSFNFHVVKVYNRQTIQVSLMLNGWPVISAFAGDQDVTR
       :::::.::   : :.:::::::::.::::::::::::::::: ::.::::::::::::::
XP_011 VNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTR
             130       140       150       160       170       180 

              160       170       180       190   
pF1KB5 EAASNGVLIQMEKGDRAYLKLERGNLMGGWKYSTFSGFLVFPL
       ::::::::. ::. :...:::::::::::::::::::::::::
XP_011 EAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
             190       200       210       220    

>>XP_016881048 (OMIM: 600433) PREDICTED: cerebellin-2 is  (224 aa)
 initn: 978 init1: 819 opt: 977  Z-score: 1316.3  bits: 250.5 E(85289): 1.4e-66
Smith-Waterman score: 977; 79.8% identity (88.6% similar) in 193 aa overlap (2-193:32-224)

                                            10        20        30 
pF1KB5                              MLGVLELLLLGAAWLAGPARGQNETEPIVLE
                                     :::   :::       :.:.::.:::::::
XP_016 QAPGRGPLGLRLMMPGRRGALREPGGCGSCLGVALALLLLLLPACCPVRAQNDTEPIVLE
              10        20        30        40        50        60 

              40        50         60        70        80        90
pF1KB5 GKCLVVCDSNPTSDPTGTA-LGISVRSGSAKVAFSAIRSTNHEPSEMSNRTMIIYFDQVL
       :::::::::.:..: . :. :::::::::::::::: ::::::::::::::: :::::::
XP_016 GKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVL
              70        80        90       100       110       120 

              100       110       120       130       140       150
pF1KB5 VNIGNNFDSERSTFIAPRKGIYSFNFHVVKVYNRQTIQVSLMLNGWPVISAFAGDQDVTR
       :::::.::   : :.:::::::::.::::::::::::::::: ::.::::::::::::::
XP_016 VNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTR
             130       140       150       160       170       180 

              160       170       180       190   
pF1KB5 EAASNGVLIQMEKGDRAYLKLERGNLMGGWKYSTFSGFLVFPL
       ::::::::. ::. :...:::::::::::::::::::::::::
XP_016 EAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
             190       200       210       220    

>>NP_872317 (OMIM: 600433) cerebellin-2 precursor [Homo   (224 aa)
 initn: 978 init1: 819 opt: 977  Z-score: 1316.3  bits: 250.5 E(85289): 1.4e-66
Smith-Waterman score: 977; 79.8% identity (88.6% similar) in 193 aa overlap (2-193:32-224)

                                            10        20        30 
pF1KB5                              MLGVLELLLLGAAWLAGPARGQNETEPIVLE
                                     :::   :::       :.:.::.:::::::
NP_872 QAPGRGPLGLRLMMPGRRGALREPGGCGSCLGVALALLLLLLPACCPVRAQNDTEPIVLE
              10        20        30        40        50        60 

              40        50         60        70        80        90
pF1KB5 GKCLVVCDSNPTSDPTGTA-LGISVRSGSAKVAFSAIRSTNHEPSEMSNRTMIIYFDQVL
       :::::::::.:..: . :. :::::::::::::::: ::::::::::::::: :::::::
NP_872 GKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVL
              70        80        90       100       110       120 

              100       110       120       130       140       150
pF1KB5 VNIGNNFDSERSTFIAPRKGIYSFNFHVVKVYNRQTIQVSLMLNGWPVISAFAGDQDVTR
       :::::.::   : :.:::::::::.::::::::::::::::: ::.::::::::::::::
NP_872 VNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTR
             130       140       150       160       170       180 

              160       170       180       190   
pF1KB5 EAASNGVLIQMEKGDRAYLKLERGNLMGGWKYSTFSGFLVFPL
       ::::::::. ::. :...:::::::::::::::::::::::::
NP_872 EAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
             190       200       210       220    

>>XP_016881049 (OMIM: 600433) PREDICTED: cerebellin-2 is  (224 aa)
 initn: 978 init1: 819 opt: 977  Z-score: 1316.3  bits: 250.5 E(85289): 1.4e-66
Smith-Waterman score: 977; 79.8% identity (88.6% similar) in 193 aa overlap (2-193:32-224)

                                            10        20        30 
pF1KB5                              MLGVLELLLLGAAWLAGPARGQNETEPIVLE
                                     :::   :::       :.:.::.:::::::
XP_016 QAPGRGPLGLRLMMPGRRGALREPGGCGSCLGVALALLLLLLPACCPVRAQNDTEPIVLE
              10        20        30        40        50        60 

              40        50         60        70        80        90
pF1KB5 GKCLVVCDSNPTSDPTGTA-LGISVRSGSAKVAFSAIRSTNHEPSEMSNRTMIIYFDQVL
       :::::::::.:..: . :. :::::::::::::::: ::::::::::::::: :::::::
XP_016 GKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVL
              70        80        90       100       110       120 

              100       110       120       130       140       150
pF1KB5 VNIGNNFDSERSTFIAPRKGIYSFNFHVVKVYNRQTIQVSLMLNGWPVISAFAGDQDVTR
       :::::.::   : :.:::::::::.::::::::::::::::: ::.::::::::::::::
XP_016 VNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTR
             130       140       150       160       170       180 

              160       170       180       190   
pF1KB5 EAASNGVLIQMEKGDRAYLKLERGNLMGGWKYSTFSGFLVFPL
       ::::::::. ::. :...:::::::::::::::::::::::::
XP_016 EAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
             190       200       210       220    

>>XP_006722457 (OMIM: 600433) PREDICTED: cerebellin-2 is  (224 aa)
 initn: 978 init1: 819 opt: 977  Z-score: 1316.3  bits: 250.5 E(85289): 1.4e-66
Smith-Waterman score: 977; 79.8% identity (88.6% similar) in 193 aa overlap (2-193:32-224)

                                            10        20        30 
pF1KB5                              MLGVLELLLLGAAWLAGPARGQNETEPIVLE
                                     :::   :::       :.:.::.:::::::
XP_006 QAPGRGPLGLRLMMPGRRGALREPGGCGSCLGVALALLLLLLPACCPVRAQNDTEPIVLE
              10        20        30        40        50        60 

              40        50         60        70        80        90
pF1KB5 GKCLVVCDSNPTSDPTGTA-LGISVRSGSAKVAFSAIRSTNHEPSEMSNRTMIIYFDQVL
       :::::::::.:..: . :. :::::::::::::::: ::::::::::::::: :::::::
XP_006 GKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVL
              70        80        90       100       110       120 

              100       110       120       130       140       150
pF1KB5 VNIGNNFDSERSTFIAPRKGIYSFNFHVVKVYNRQTIQVSLMLNGWPVISAFAGDQDVTR
       :::::.::   : :.:::::::::.::::::::::::::::: ::.::::::::::::::
XP_006 VNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTR
             130       140       150       160       170       180 

              160       170       180       190   
pF1KB5 EAASNGVLIQMEKGDRAYLKLERGNLMGGWKYSTFSGFLVFPL
       ::::::::. ::. :...:::::::::::::::::::::::::
XP_006 EAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
             190       200       210       220    

>>NP_542184 (OMIM: 615029) cerebellin-4 precursor [Homo   (201 aa)
 initn: 664 init1: 509 opt: 890  Z-score: 1200.5  bits: 229.0 E(85289): 4e-60
Smith-Waterman score: 890; 74.3% identity (91.6% similar) in 179 aa overlap (18-193:24-201)

                     10        20        30        40        50    
pF1KB5       MLGVLELLLLGAAWLAGPARGQNETEPIVLEGKCLVVCDSNPTSDPTGTA---L
                              :. .::.::::::::::::::::::..:  :..   :
NP_542 MGSGRRALSAVPAVLLVLTLPGLPVWAQNDTEPIVLEGKCLVVCDSNPATDSKGSSSSPL
               10        20        30        40        50        60

              60        70        80        90       100       110 
pF1KB5 GISVRSGSAKVAFSAIRSTNHEPSEMSNRTMIIYFDQVLVNIGNNFDSERSTFIAPRKGI
       :::::....::::::.::::::::::::.: ::::::.:::.:: :  : :.:.::::::
NP_542 GISVRAANSKVAFSAVRSTNHEPSEMSNKTRIIYFDQILVNVGNFFTLE-SVFVAPRKGI
               70        80        90       100        110         

             120       130       140       150       160       170 
pF1KB5 YSFNFHVVKVYNRQTIQVSLMLNGWPVISAFAGDQDVTREAASNGVLIQMEKGDRAYLKL
       :::.:::.:::. :::::.::::: :::::::::.:::::::.::::. ..: :..::::
NP_542 YSFSFHVIKVYQSQTIQVNLMLNGKPVISAFAGDKDVTREAATNGVLLYLDKEDKVYLKL
     120       130       140       150       160       170         

             180       190   
pF1KB5 ERGNLMGGWKYSTFSGFLVFPL
       :.:::.:::.::::::::::::
NP_542 EKGNLVGGWQYSTFSGFLVFPL
     180       190       200 

>>NP_001034860 (OMIM: 612978) cerebellin-3 precursor [Ho  (205 aa)
 initn: 709 init1: 553 opt: 724  Z-score: 977.9  bits: 187.8 E(85289): 1e-47
Smith-Waterman score: 724; 58.8% identity (80.4% similar) in 194 aa overlap (4-193:21-205)

                                10        20        30        40   
pF1KB5                  MLGVLELLLLGAAWLAGPARGQNETEPIVLEGKCLVVCDSN--
                           :: :: :::.:      .:. .::..:::.:::::. .  
NP_001 MLGAKPHWLPGPLHSPGLPLVLVLLALGAGW------AQEGSEPVLLEGECLVVCEPGRA
               10        20        30              40        50    

              50        60        70         80         90         
pF1KB5 PTSDPTGTALGISVRSGSAKVAFSAIRSTNHEPS-EMSNRTM-IIYFDQVLVNIGNNFDS
        .. : :.:::   ..  ..:::.:.:: .:::. : .: :   ::::::::: :..:: 
NP_001 AAGGPGGAALG---EAPPGRVAFAAVRSHHHEPAGETGNGTSGAIYFDQVLVNEGGGFDR
           60           70        80        90       100       110 

     100       110       120       130       140       150         
pF1KB5 ERSTFIAPRKGIYSFNFHVVKVYNRQTIQVSLMLNGWPVISAFAGDQDVTREAASNGVLI
         ..:.:: .:.::: :::::::::::.::::::: ::::::::.: :::::::...::.
NP_001 ASGSFVAPVRGVYSFRFHVVKVYNRQTVQVSLMLNTWPVISAFANDPDVTREAATSSVLL
             120       130       140       150       160       170 

     160       170       180       190   
pF1KB5 QMEKGDRAYLKLERGNLMGGWKYSTFSGFLVFPL
        .. :::. :.:.::::.::::::.:::::.:::
NP_001 PLDPGDRVSLRLRRGNLLGGWKYSSFSGFLIFPL
             180       190       200     

>>XP_016875369 (OMIM: 610375) PREDICTED: caprin-2 isofor  (689 aa)
 initn: 317 init1: 218 opt: 341  Z-score: 456.1  bits: 93.0 E(85289): 1.2e-18
Smith-Waterman score: 341; 37.9% identity (68.6% similar) in 153 aa overlap (42-191:538-687)

              20        30        40        50          60         
pF1KB5 AAWLAGPARGQNETEPIVLEGKCLVVCDSNPTSDPTGTALGISVRS--GSAKVAFSAIRS
                                     :...:..: : . :     . .::::: :.
XP_016 QVSSPERDNETFNSGDSGQGDSRSMTPVDVPVTNPAATILPVHVYPLPQQMRVAFSAART
       510       520       530       540       550       560       

      70        80        90       100       110       120         
pF1KB5 TNHEPSEMSNRTMIIYFDQVLVNIGNNFDSERSTFIAPRKGIYSFNFHVVKVYNRQTIQV
       .:  :. ...    : :: .: :.:..:: . . :  : .: : : ::..:.     . :
XP_016 SNLAPGTLDQ---PIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYV
       570          580       590       600       610       620    

     130       140       150       160       170        180        
pF1KB5 SLMLNGWPVISAFAGDQDVTREAASNGVLIQMEKGDRAYLKLERGNLMGG-WKYSTFSGF
       .:: :   ..::.:.:    .:.::: ...:. .::. .:.:.:: ..:. ::::::::.
XP_016 NLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGY
          630       640       650       660       670       680    

      190   
pF1KB5 LVFPL
       :..  
XP_016 LLYQD
            

>>XP_016875368 (OMIM: 610375) PREDICTED: caprin-2 isofor  (738 aa)
 initn: 317 init1: 218 opt: 341  Z-score: 455.6  bits: 93.0 E(85289): 1.2e-18
Smith-Waterman score: 341; 37.9% identity (68.6% similar) in 153 aa overlap (42-191:587-736)

              20        30        40        50          60         
pF1KB5 AAWLAGPARGQNETEPIVLEGKCLVVCDSNPTSDPTGTALGISVRS--GSAKVAFSAIRS
                                     :...:..: : . :     . .::::: :.
XP_016 QVSSPERDNETFNSGDSGQGDSRSMTPVDVPVTNPAATILPVHVYPLPQQMRVAFSAART
        560       570       580       590       600       610      

      70        80        90       100       110       120         
pF1KB5 TNHEPSEMSNRTMIIYFDQVLVNIGNNFDSERSTFIAPRKGIYSFNFHVVKVYNRQTIQV
       .:  :. ...    : :: .: :.:..:: . . :  : .: : : ::..:.     . :
XP_016 SNLAPGTLDQ---PIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYV
        620          630       640       650       660       670   

     130       140       150       160       170        180        
pF1KB5 SLMLNGWPVISAFAGDQDVTREAASNGVLIQMEKGDRAYLKLERGNLMGG-WKYSTFSGF
       .:: :   ..::.:.:    .:.::: ...:. .::. .:.:.:: ..:. ::::::::.
XP_016 NLMKNEEVLVSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGY
           680       690       700       710       720       730   

      190   
pF1KB5 LVFPL
       :..  
XP_016 LLYQD
            




193 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 12:48:39 2016 done: Sat Nov  5 12:48:40 2016
 Total Scan time:  5.570 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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