Result of FASTA (ccds) for
pFN21AB5908
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5908, 520 aa
1>>>pF1KB5908 520 - 520 aa - 520 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.7718+/-0.000873; mu= 8.0229+/- 0.053
mean_var=154.6376+/-30.219, 0's: 0 Z-trim(112.2): 49 B-trim: 29 in 1/51
Lambda= 0.103138
statistics sampled from 12977 (13021) to 12977 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.743), E-opt: 0.2 (0.4), width: 16
Scan time: 3.400
The best scores are: opt bits E(32554)
CCDS43106.1 MITF gene_id:4286|Hs108|chr3 ( 520) 3424 521.3 1.1e-147
CCDS46865.1 MITF gene_id:4286|Hs108|chr3 ( 504) 3192 486.7 2.6e-137
CCDS54607.1 MITF gene_id:4286|Hs108|chr3 ( 468) 3082 470.3 2.1e-132
CCDS43107.1 MITF gene_id:4286|Hs108|chr3 ( 413) 2667 408.5 7.2e-114
CCDS2913.1 MITF gene_id:4286|Hs108|chr3 ( 419) 2645 405.3 7.1e-113
CCDS46866.2 MITF gene_id:4286|Hs108|chr3 ( 357) 2146 331.0 1.4e-90
CCDS14315.3 TFE3 gene_id:7030|Hs108|chrX ( 575) 1018 163.3 6.9e-40
CCDS5762.1 TFEC gene_id:22797|Hs108|chr7 ( 347) 972 156.3 5.3e-38
CCDS59076.1 TFEC gene_id:22797|Hs108|chr7 ( 280) 899 145.4 8.3e-35
CCDS34738.1 TFEC gene_id:22797|Hs108|chr7 ( 318) 899 145.4 9.1e-35
CCDS4858.1 TFEB gene_id:7942|Hs108|chr6 ( 476) 770 126.3 7.6e-29
CCDS64425.1 TFEB gene_id:7942|Hs108|chr6 ( 490) 770 126.3 7.8e-29
CCDS64424.1 TFEB gene_id:7942|Hs108|chr6 ( 391) 758 124.5 2.2e-28
CCDS74962.1 MITF gene_id:4286|Hs108|chr3 ( 91) 527 89.7 1.5e-18
>>CCDS43106.1 MITF gene_id:4286|Hs108|chr3 (520 aa)
initn: 3424 init1: 3424 opt: 3424 Z-score: 2765.1 bits: 521.3 E(32554): 1.1e-147
Smith-Waterman score: 3424; 100.0% identity (100.0% similar) in 520 aa overlap (1-520:1-520)
10 20 30 40 50 60
pF1KB5 MQSESGIVPDFEVGEEFHEEPKTYYELKSQPLKSSSSAEHPGASKPPISSSSMTSRILLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MQSESGIVPDFEVGEEFHEEPKTYYELKSQPLKSSSSAEHPGASKPPISSSSMTSRILLR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 QQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QQLMREQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 THLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 THLENPTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 PMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PMAMLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 ILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ILGLMDPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARAL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 EQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 VLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILM
430 440 450 460 470 480
490 500 510 520
pF1KB5 DDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
::::::::::::::::::::::::::::::::::::::::
CCDS43 DDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
490 500 510 520
>>CCDS46865.1 MITF gene_id:4286|Hs108|chr3 (504 aa)
initn: 3192 init1: 3192 opt: 3192 Z-score: 2578.7 bits: 486.7 E(32554): 2.6e-137
Smith-Waterman score: 3192; 100.0% identity (100.0% similar) in 485 aa overlap (36-520:20-504)
10 20 30 40 50 60
pF1KB5 GIVPDFEVGEEFHEEPKTYYELKSQPLKSSSSAEHPGASKPPISSSSMTSRILLRQQLMR
::::::::::::::::::::::::::::::
CCDS46 MEALRVQMFMPCSFESLYLSSAEHPGASKPPISSSSMTSRILLRQQLMR
10 20 30 40
70 80 90 100 110 120
pF1KB5 EQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQTHLEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EQMQEQERREQQQKLQAAQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQTHLEN
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 PTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PTKYHIQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAML
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB5 TLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLM
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 DPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 DPALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQ
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 KKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRA
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 KELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 KELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENC
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 SQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 SQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLS
410 420 430 440 450 460
490 500 510 520
pF1KB5 PVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
:::::::::::::::::::::::::::::::::::
CCDS46 PVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
470 480 490 500
>>CCDS54607.1 MITF gene_id:4286|Hs108|chr3 (468 aa)
initn: 3082 init1: 3082 opt: 3082 Z-score: 2490.7 bits: 470.3 E(32554): 2.1e-132
Smith-Waterman score: 3082; 100.0% identity (100.0% similar) in 468 aa overlap (53-520:1-468)
30 40 50 60 70 80
pF1KB5 TYYELKSQPLKSSSSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQQQKLQA
::::::::::::::::::::::::::::::
CCDS54 MTSRILLRQQLMREQMQEQERREQQQKLQA
10 20 30
90 100 110 120 130 140
pF1KB5 AQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 AQFMQQRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQY
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB5 LSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LSTTLANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQ
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB5 NRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLI
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB5 DLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNIN
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB5 DRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHL
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB5 LLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTL
340 350 360 370 380 390
450 460 470 480 490 500
pF1KB5 DLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGAS
400 410 420 430 440 450
510 520
pF1KB5 KTSSRRSSMSMEETEHTC
::::::::::::::::::
CCDS54 KTSSRRSSMSMEETEHTC
460
>>CCDS43107.1 MITF gene_id:4286|Hs108|chr3 (413 aa)
initn: 2667 init1: 2667 opt: 2667 Z-score: 2157.7 bits: 408.5 E(32554): 7.2e-114
Smith-Waterman score: 2667; 99.8% identity (100.0% similar) in 403 aa overlap (118-520:11-413)
90 100 110 120 130 140
pF1KB5 QRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTL
.:::::::::::::::::::::::::::::
CCDS43 MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTL
10 20 30 40
150 160 170 180 190 200
pF1KB5 ANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAES
50 60 70 80 90 100
210 220 230 240 250 260
pF1KB5 ECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGN
110 120 130 140 150 160
270 280 290 300 310 320
pF1KB5 QGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKE
170 180 190 200 210 220
330 340 350 360 370 380
pF1KB5 LGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQ
230 240 250 260 270 280
390 400 410 420 430 440
pF1KB5 ELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDG
290 300 310 320 330 340
450 460 470 480 490 500
pF1KB5 TITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSR
350 360 370 380 390 400
510 520
pF1KB5 RSSMSMEETEHTC
:::::::::::::
CCDS43 RSSMSMEETEHTC
410
>>CCDS2913.1 MITF gene_id:4286|Hs108|chr3 (419 aa)
initn: 1477 init1: 1477 opt: 2645 Z-score: 2140.0 bits: 405.3 E(32554): 7.1e-113
Smith-Waterman score: 2645; 98.3% identity (98.5% similar) in 409 aa overlap (118-520:11-419)
90 100 110 120 130 140
pF1KB5 QRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTL
.:::::::::::::::::::::::::::::
CCDS29 MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTL
10 20 30 40
150 160 170 180 190 200
pF1KB5 ANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 ANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAES
50 60 70 80 90 100
210 220 230 240 250 260
pF1KB5 ECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 ECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGN
110 120 130 140 150 160
270 280 290 300 310 320
pF1KB5 QGLPPPGLTISNSCPANLPNIKRELT------ESEARALAKERQKKDNHNLIERRRRFNI
:::::::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS29 QGLPPPGLTISNSCPANLPNIKRELTACIFPTESEARALAKERQKKDNHNLIERRRRFNI
170 180 190 200 210 220
330 340 350 360 370 380
pF1KB5 NDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 NDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRH
230 240 250 260 270 280
390 400 410 420 430 440
pF1KB5 LLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 LLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTT
290 300 310 320 330 340
450 460 470 480 490 500
pF1KB5 LDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 LDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGA
350 360 370 380 390 400
510 520
pF1KB5 SKTSSRRSSMSMEETEHTC
:::::::::::::::::::
CCDS29 SKTSSRRSSMSMEETEHTC
410
>>CCDS46866.2 MITF gene_id:4286|Hs108|chr3 (357 aa)
initn: 2146 init1: 2146 opt: 2146 Z-score: 1739.7 bits: 331.0 E(32554): 1.4e-90
Smith-Waterman score: 2158; 85.9% identity (86.1% similar) in 403 aa overlap (118-520:11-357)
90 100 110 120 130 140
pF1KB5 QRVPVSQTPAINVSVPTTLPSATQVPMEVLKVQTHLENPTKYHIQQAQRQQVKQYLSTTL
.::::::::::::::::::::
CCDS46 MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQ---------
10 20 30
150 160 170 180 190 200
pF1KB5 ANKHANQVLSLPCPNQPGDHVMPPVPGSSAPNSPMAMLTLNSNCEKEGFYKFEEQNRAES
:::::::::::::
CCDS46 -----------------------------------------------GFYKFEEQNRAES
40
210 220 230 240 250 260
pF1KB5 ECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLYGN
50 60 70 80 90 100
270 280 290 300 310 320
pF1KB5 QGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 QGLPPPGLTISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKE
110 120 130 140 150 160
330 340 350 360 370 380
pF1KB5 LGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQ
170 180 190 200 210 220
390 400 410 420 430 440
pF1KB5 ELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDG
230 240 250 260 270 280
450 460 470 480 490 500
pF1KB5 TITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSR
290 300 310 320 330 340
510 520
pF1KB5 RSSMSMEETEHTC
:::::::::::::
CCDS46 RSSMSMEETEHTC
350
>>CCDS14315.3 TFE3 gene_id:7030|Hs108|chrX (575 aa)
initn: 1398 init1: 824 opt: 1018 Z-score: 829.6 bits: 163.3 E(32554): 6.9e-40
Smith-Waterman score: 1476; 50.5% identity (68.8% similar) in 564 aa overlap (4-515:46-573)
10 20 30
pF1KB5 MQSESGIVPDFEVGEEFHEEPKTYYELKSQPL-
::::: :.:. : .: ..::::::::
CCDS14 AEGPRAVFVLLEERRPADSAQLLSLNSLLPESGIVADIEL--ENVLDPDSFYELKSQPLP
20 30 40 50 60 70
40 50 60 70
pF1KB5 -KSS---------------SSAEHPGASKPPISSSSMTSRILLRQQLMREQMQEQERREQ
.:: :.. :.:. : ::: .::.:::::::: : :::::::.
CCDS14 LRSSLPISLQATPATPATLSASSSAGGSRTPAMSSSSSSRVLLRQQLMRAQAQEQERRER
80 90 100 110 120 130
80 90 100 110 120 130
pF1KB5 QQKLQAAQFMQQRVPVSQTPAINV-SVPT---TL--PSATQVPMEVLKVQTHLENPTKYH
... :: : . :. .:::.: .: . :: : .::: :::::::::::::.::
CCDS14 REQAAAAPFPS---PAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYH
140 150 160 170 180 190
140 150 160 170 180
pF1KB5 IQQAQRQQVKQYLSTTLANKHANQVLSLPCPNQPGDHVMP-PV------PGSSAPNSPMA
.:::.::::::::::::. : :.:.:. : :. . . .: : : .::::::::
CCDS14 LQQARRQQVKQYLSTTLGPKLASQALT-PPPGPASAQPLPAPEAAHTTGPTGSAPNSPMA
200 210 220 230 240
190 200 210 220 230 240
pF1KB5 MLTLNSNCEKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILG
.::..:. ::: .:::::.:::::::::.:.:.
CCDS14 LLTIGSSSEKE----------------------------IDDVIDEIISLESSYNDEMLS
250 260 270 280
250 260 270 280 290 300
pF1KB5 LMD---PALQMANTLPVSGNLIDLYGNQGLPPPGLTISNSCPANLPNIKRELTESEARAL
. .::. .::::::::.:.:..::. :..:.::::::.:::::::..:.::.::
CCDS14 YLPGGTTGLQLPSTLPVSGNLLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKAL
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB5 AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQR
::::::::::::::::::::::::::::::::::.::.::::::::::::::::::::.
CCDS14 LKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSSDPEMRWNKGTILKASVDYIRKLQK
350 360 370 380 390 400
370 380 390 400 410 420
pF1KB5 EQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEP
::::.:.::.::..::.::: : :::::::.::. ::: . :. :: : .. . .:
CCDS14 EQQRSKDLESRQRSLEQANRSLQLRIQELELQAQIHGLPVPPTPGLLSLATTSASDSLKP
410 420 430 440 450 460
430 440 450 460 470
pF1KB5 ----VLENCSQDLLQHHADLTCTTTLDLTDGTITFNN---NLGTGTEANQAYSVPTKMGS
. :. :. . . . .. .: .. . : ..:
CCDS14 EQLDIEEEGRPGAATFHVGGGPAQNAPHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLG-
470 480 490 500 510 520
480 490 500 510 520
pF1KB5 KLEDILMDD-----------TLSPV-GVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
::::::.. .:::. ...:::::::::..::.::::::.::::
CCDS14 -LEDILMEEEEGVVGGLSGGALSPLRAASDPLLSSVSPAVSKASSRRSSFSMEEES
530 540 550 560 570
>>CCDS5762.1 TFEC gene_id:22797|Hs108|chr7 (347 aa)
initn: 883 init1: 648 opt: 972 Z-score: 795.8 bits: 156.3 E(32554): 5.3e-38
Smith-Waterman score: 972; 57.9% identity (79.1% similar) in 297 aa overlap (222-515:60-343)
200 210 220 230 240 250
pF1KB5 EKEGFYKFEEQNRAESECPGMNTHSRASCMQMDDVIDDIISLESSYNEEILGLMDPALQM
.:.:::.:::..:::..:: : : : :
CCDS57 HTTLDSDAGLTENPLTKLLAIGKEDDNAQWHMEDVIEDIIGMESSFKEE--G-ADSPLLM
30 40 50 60 70 80
260 270 280 290 300
pF1KB5 ANTLPVSGNLIDLY-GNQGLPPP--GLTISNSCPANLPNIKRELTESEARALAKERQKKD
:: ::...:.: :.::. : ::: : :::..:: .:::.::...:::::::::::
CCDS57 QRTL--SGSILDVYSGEQGISPINMGLT-SASCPSSLP-MKREITETDTRALAKERQKKD
90 100 110 120 130 140
310 320 330 340 350 360
pF1KB5 NHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKEL
::::::::::.::: :::::::::::::::::::::::::::::.::. ::.:::::.::
CCDS57 NHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYIKWLQKEQQRAREL
150 160 170 180 190 200
370 380 390 400 410 420
pF1KB5 ENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPSTGLCSPDLVNRIIKQEPVLENCSQD
:.::::::.:::.:::::::::.:::.::: . : : . :: .. ::. :. : :
CCDS57 EHRQKKLEQANRRLLLRIQELEIQARTHGLPTLASLG--TVDLGAHVTKQQSHPEQNSVD
210 220 230 240 250 260
430 440 450 460 470 480
pF1KB5 LLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQAYSVPTKMGSKLEDILMDDTLSPVG
:. .. . .: : .:.:.. :. :. ..:. : ..:. .:.:::.:: :
CCDS57 YCQQ-LTVSQGPSPELCDQAIAFSDPLSYFTDL--SFSAALKEEQRLDGMLLDDTISPFG
270 280 290 300 310
490 500 510 520
pF1KB5 VTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
::::::..::..:: ::::::.: ..
CCDS57 -TDPLLSATSPAVSKESSRRSSFSSDDGDEL
320 330 340
>>CCDS59076.1 TFEC gene_id:22797|Hs108|chr7 (280 aa)
initn: 814 init1: 648 opt: 899 Z-score: 738.4 bits: 145.4 E(32554): 8.3e-35
Smith-Waterman score: 899; 58.8% identity (80.5% similar) in 262 aa overlap (257-515:23-276)
230 240 250 260 270 280
pF1KB5 IDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLY-GNQGLPPP--GLTISNSCPA
.::...:.: :.::. : ::: : :::.
CCDS59 MMKEKEKTIAIVKVIDTSKLKLLSGSILDVYSGEQGISPINMGLT-SASCPS
10 20 30 40 50
290 300 310 320 330 340
pF1KB5 NLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWN
.:: .:::.::...:::::::::::::::::::::.::: ::::::::::::::::::::
CCDS59 SLP-MKREITETDTRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWN
60 70 80 90 100 110
350 360 370 380 390 400
pF1KB5 KGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPS
:::::::::.::. ::.:::::.:::.::::::.:::.:::::::::.:::.::: . :
CCDS59 KGTILKASVEYIKWLQKEQQRARELEHRQKKLEQANRRLLLRIQELEIQARTHGLPTLAS
120 130 140 150 160 170
410 420 430 440 450 460
pF1KB5 TGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQ
: . :: .. ::. :. : : :. .. . .: : .:.:.. :. :. .
CCDS59 LG--TVDLGAHVTKQQSHPEQNSVDYCQQ-LTVSQGPSPELCDQAIAFSDPLSYFTDLS-
180 190 200 210 220
470 480 490 500 510 520
pF1KB5 AYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
.:. : ..:. .:.:::.:: : ::::::..::..:: ::::::.: ..
CCDS59 -FSAALKEEQRLDGMLLDDTISPFG-TDPLLSATSPAVSKESSRRSSFSSDDGDEL
230 240 250 260 270 280
>>CCDS34738.1 TFEC gene_id:22797|Hs108|chr7 (318 aa)
initn: 814 init1: 648 opt: 899 Z-score: 737.6 bits: 145.4 E(32554): 9.1e-35
Smith-Waterman score: 899; 58.8% identity (80.5% similar) in 262 aa overlap (257-515:61-314)
230 240 250 260 270 280
pF1KB5 IDDIISLESSYNEEILGLMDPALQMANTLPVSGNLIDLY-GNQGLPPP--GLTISNSCPA
.::...:.: :.::. : ::: : :::.
CCDS34 TTLDSDAGLTENPLTKLLAIGKEDDNAQWHLSGSILDVYSGEQGISPINMGLT-SASCPS
40 50 60 70 80
290 300 310 320 330 340
pF1KB5 NLPNIKRELTESEARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWN
.:: .:::.::...:::::::::::::::::::::.::: ::::::::::::::::::::
CCDS34 SLP-MKREITETDTRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWN
90 100 110 120 130 140
350 360 370 380 390 400
pF1KB5 KGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELEMQARAHGLSLIPS
:::::::::.::. ::.:::::.:::.::::::.:::.:::::::::.:::.::: . :
CCDS34 KGTILKASVEYIKWLQKEQQRARELEHRQKKLEQANRRLLLRIQELEIQARTHGLPTLAS
150 160 170 180 190 200
410 420 430 440 450 460
pF1KB5 TGLCSPDLVNRIIKQEPVLENCSQDLLQHHADLTCTTTLDLTDGTITFNNNLGTGTEANQ
: . :: .. ::. :. : : :. .. . .: : .:.:.. :. :. .
CCDS34 LG--TVDLGAHVTKQQSHPEQNSVDYCQQ-LTVSQGPSPELCDQAIAFSDPLSYFTDLS-
210 220 230 240 250 260
470 480 490 500 510 520
pF1KB5 AYSVPTKMGSKLEDILMDDTLSPVGVTDPLLSSVSPGASKTSSRRSSMSMEETEHTC
.:. : ..:. .:.:::.:: : ::::::..::..:: ::::::.: ..
CCDS34 -FSAALKEEQRLDGMLLDDTISPFG-TDPLLSATSPAVSKESSRRSSFSSDDGDEL
270 280 290 300 310
520 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 10:38:52 2016 done: Sat Nov 5 10:38:53 2016
Total Scan time: 3.400 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]