Result of FASTA (omim) for pFN21AB9856
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9856, 390 aa
  1>>>pF1KB9856 390 - 390 aa - 390 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.6475+/-0.000345; mu= 22.0998+/- 0.022
 mean_var=94.2274+/-22.059, 0's: 0 Z-trim(116.9): 567  B-trim: 2725 in 2/49
 Lambda= 0.132125
 statistics sampled from 27726 (28482) to 27726 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.334), width:  16
 Scan time:  8.980

The best scores are:                                      opt bits E(85289)
NP_000854 (OMIM: 182131) 5-hydroxytryptamine recep ( 390) 2572 500.4  3e-141
NP_000855 (OMIM: 182133) 5-hydroxytryptamine recep ( 377) 1561 307.7   3e-83
NP_001309138 (OMIM: 182134) 5-hydroxytryptamine re ( 366) 1139 227.2 4.9e-59
NP_000857 (OMIM: 182134) 5-hydroxytryptamine recep ( 366) 1139 227.2 4.9e-59
NP_001309137 (OMIM: 182134) 5-hydroxytryptamine re ( 366) 1139 227.2 4.9e-59
XP_011531966 (OMIM: 182134) PREDICTED: 5-hydroxytr ( 366) 1139 227.2 4.9e-59
NP_001309139 (OMIM: 182134) 5-hydroxytryptamine re ( 366) 1139 227.2 4.9e-59
XP_005264808 (OMIM: 182134) PREDICTED: 5-hydroxytr ( 366) 1139 227.2 4.9e-59
NP_000856 (OMIM: 182132) 5-hydroxytryptamine recep ( 365) 1061 212.3 1.5e-54
XP_011534091 (OMIM: 182132) PREDICTED: 5-hydroxytr ( 365) 1061 212.3 1.5e-54
NP_000515 (OMIM: 109760,614674) 5-hydroxytryptamin ( 422)  721 147.6 5.2e-35
NP_000675 (OMIM: 109630,607276) beta-1 adrenergic  ( 477)  685 140.8 6.5e-33
NP_387512 (OMIM: 126451,181500,190300) D(3) dopami ( 367)  663 136.5   1e-31
NP_000859 (OMIM: 312861) 5-hydroxytryptamine recep ( 458)  574 119.6 1.5e-26
NP_001243689 (OMIM: 312861) 5-hydroxytryptamine re ( 458)  574 119.6 1.5e-26
NP_001307687 (OMIM: 601122) 5-hydroxytryptamine re ( 439)  566 118.1 4.1e-26
XP_006712545 (OMIM: 601122) PREDICTED: 5-hydroxytr ( 456)  566 118.1 4.2e-26
NP_000858 (OMIM: 601122) 5-hydroxytryptamine recep ( 481)  566 118.1 4.4e-26
NP_000672 (OMIM: 104210) alpha-2A adrenergic recep ( 465)  540 113.2 1.3e-24
NP_076917 (OMIM: 601305) 5-hydroxytryptamine recep ( 357)  527 110.5 6.3e-24
NP_062874 (OMIM: 182137) 5-hydroxytryptamine recep ( 432)  523 109.9 1.2e-23
NP_000863 (OMIM: 182137) 5-hydroxytryptamine recep ( 445)  523 109.9 1.2e-23
NP_062873 (OMIM: 182137) 5-hydroxytryptamine recep ( 479)  523 109.9 1.3e-23
XP_011542714 (OMIM: 104221) PREDICTED: alpha-1A ad ( 308)  504 106.1 1.2e-22
XP_016868585 (OMIM: 104221) PREDICTED: alpha-1A ad ( 317)  504 106.1 1.2e-22
XP_011542713 (OMIM: 104221) PREDICTED: alpha-1A ad ( 324)  504 106.1 1.2e-22
NP_001309433 (OMIM: 104221) alpha-1A adrenergic re ( 342)  504 106.1 1.3e-22
NP_001309432 (OMIM: 104221) alpha-1A adrenergic re ( 370)  504 106.2 1.3e-22
NP_001309431 (OMIM: 104221) alpha-1A adrenergic re ( 372)  504 106.2 1.3e-22
NP_150645 (OMIM: 104221) alpha-1A adrenergic recep ( 429)  504 106.3 1.5e-22
XP_006716356 (OMIM: 104221) PREDICTED: alpha-1A ad ( 429)  504 106.3 1.5e-22
NP_150647 (OMIM: 104221) alpha-1A adrenergic recep ( 455)  504 106.3 1.5e-22
NP_000671 (OMIM: 104221) alpha-1A adrenergic recep ( 466)  504 106.3 1.6e-22
XP_016868583 (OMIM: 104221) PREDICTED: alpha-1A ad ( 475)  504 106.3 1.6e-22
NP_150646 (OMIM: 104221) alpha-1A adrenergic recep ( 475)  504 106.3 1.6e-22
XP_006716355 (OMIM: 104221) PREDICTED: alpha-1A ad ( 475)  504 106.3 1.6e-22
XP_016868584 (OMIM: 104221) PREDICTED: alpha-1A ad ( 475)  504 106.3 1.6e-22
XP_005265876 (OMIM: 104220) PREDICTED: alpha-1B ad ( 328)  497 104.8 3.2e-22
XP_006714884 (OMIM: 104220) PREDICTED: alpha-1B ad ( 331)  497 104.8 3.2e-22
XP_005265875 (OMIM: 104220) PREDICTED: alpha-1B ad ( 366)  497 104.8 3.4e-22
XP_011532740 (OMIM: 104220) PREDICTED: alpha-1B ad ( 389)  497 104.9 3.5e-22
XP_011532739 (OMIM: 104220) PREDICTED: alpha-1B ad ( 402)  497 104.9 3.6e-22
NP_000673 (OMIM: 104260,607876) alpha-2B adrenergi ( 450)  497 104.9 3.8e-22
NP_000670 (OMIM: 104220) alpha-1B adrenergic recep ( 520)  497 105.0 4.2e-22
XP_011532737 (OMIM: 104220) PREDICTED: alpha-1B ad ( 556)  497 105.1 4.4e-22
NP_000674 (OMIM: 104250) alpha-2C adrenergic recep ( 462)  490 103.6 9.8e-22
NP_000669 (OMIM: 104219) alpha-1D adrenergic recep ( 572)  483 102.4 2.8e-21
XP_011542345 (OMIM: 100100,118494) PREDICTED: musc ( 590)  479 101.7 4.9e-21
XP_011542346 (OMIM: 100100,118494) PREDICTED: musc ( 590)  479 101.7 4.9e-21
NP_000731 (OMIM: 100100,118494) muscarinic acetylc ( 590)  479 101.7 4.9e-21


>>NP_000854 (OMIM: 182131) 5-hydroxytryptamine receptor   (390 aa)
 initn: 2572 init1: 2572 opt: 2572  Z-score: 2656.8  bits: 500.4 E(85289): 3e-141
Smith-Waterman score: 2572; 100.0% identity (100.0% similar) in 390 aa overlap (1-390:1-390)

               10        20        30        40        50        60
pF1KB9 MEEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSISLPWKVLLVMLLALIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MEEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSISLPWKVLLVMLLALIT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 LATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 VCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 SLPPFFWRQAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SLPPFFWRQAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 KQTPNRTGKRLTRAQLITDSPGSTSSVTSINSRVPDVPSESGSPVYVNQVKVRVSDALLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KQTPNRTGKRLTRAQLITDSPGSTSSVTSINSRVPDVPSESGSPVYVNQVKVRVSDALLE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 KKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFDFFTWLGYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 KKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFDFFTWLGYL
              310       320       330       340       350       360

              370       380       390
pF1KB9 NSLINPIIYTMSNEDFKQAFHKLIRFKCTS
       ::::::::::::::::::::::::::::::
NP_000 NSLINPIIYTMSNEDFKQAFHKLIRFKCTS
              370       380       390

>>NP_000855 (OMIM: 182133) 5-hydroxytryptamine receptor   (377 aa)
 initn: 1535 init1: 931 opt: 1561  Z-score: 1615.5  bits: 307.7 E(85289): 3e-83
Smith-Waterman score: 1561; 62.4% identity (83.4% similar) in 380 aa overlap (12-390:3-377)

               10        20        30        40        50        60
pF1KB9 MEEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSISLPWKVLLVMLLALIT
                  :   :   .::   .:  : : .  .  ..       :. :...:..::
NP_000          MSPLNQSAEGLPQE--ASNRSLNATETSEAWDPRTLQALKISLAVVLSVIT
                        10          20        30        40         

               70        80        90       100       110       120
pF1KB9 LATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQV
       :::.::::::..:.  ::::::::::::.:::.:::::::::::::  ::.:  :..::.
NP_000 LATVLSNAFVLTTILLTRKLHTPANYLIGSLATTDLLVSILVMPISIAYTITHTWNFGQI
      50        60        70        80        90       100         

              130       140       150       160       170       180
pF1KB9 VCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISI
       .::.::::::::::::::::::::::::::::::.::: .::  .::.:::.::..:: :
NP_000 LCDIWLSSDITCCTASILHLCVIALDRYWAITDALEYSKRRTAGHAATMIAIVWAISICI
     110       120       130       140       150       160         

              190       200       210       220       230       240
pF1KB9 SLPPFFWRQAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIL
       :.::.:::::::.::.:.:.:::..: ::.::: ::::.:..::: ::::::  ::.:::
NP_000 SIPPLFWRQAKAQEEMSDCLVNTSQISYTIYSTCGAFYIPSVLLIILYGRIYRAARNRIL
     170       180       190       200       210       220         

              250       260       270       280        290         
pF1KB9 KQTPNRTGKRLTRAQLITDSPGSTSSVTSINSRVPDVPSES-GSPVYVNQVKVRVSDALL
       .  :.  :::.: :.::: : ::  :. :.:: . .  :.: :::.. :.::....:. :
NP_000 NP-PSLYGKRFTTAHLITGSAGS--SLCSLNSSLHEGHSHSAGSPLFFNHVKIKLADSAL
     230        240       250         260       270       280      

     300       310       320       330       340       350         
pF1KB9 EKKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFDFFTWLGY
       :.:.. ::::::::: :::::::::.::::::..:::.:::.:.::.: :.:::::::::
NP_000 ERKRISAARERKATKILGIILGAFIICWLPFFVVSLVLPICRDSCWIHPALFDFFTWLGY
        290       300       310       320       330       340      

     360       370       380       390
pF1KB9 LNSLINPIIYTMSNEDFKQAFHKLIRFKCTS
       :::::::::::. ::.:.:::.:.. :. .:
NP_000 LNSLINPIIYTVFNEEFRQAFQKIVPFRKAS
        350       360       370       

>>NP_001309138 (OMIM: 182134) 5-hydroxytryptamine recept  (366 aa)
 initn: 1109 init1: 617 opt: 1139  Z-score: 1180.9  bits: 227.2 E(85289): 4.9e-59
Smith-Waterman score: 1139; 48.9% identity (75.4% similar) in 366 aa overlap (32-388:5-366)

              10        20        30        40         50        60
pF1KB9 EEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSIS-LPWKVLLVMLLALIT
                                     : : ..   .. .. .: :.:. . :. ..
NP_001                           MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLA
                                         10        20        30    

               70        80        90       100       110       120
pF1KB9 LATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQV
       : ::  :..:::..  ::::: :::::: ::::::.::..::::.: .: :   : .:::
NP_001 LMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQV
           40        50        60        70        80        90    

              130       140       150       160       170       180
pF1KB9 VCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISI
       :::.::: :::::: ::::: .:::::: ::::::::. :::::.:..::..::..:. :
NP_001 VCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFI
          100       110       120       130       140       150    

              190       200       210       220       230       240
pF1KB9 SLPPFFWRQAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIL
       :.::.:::.  . .. .::... :::. :.::: ::::.:  :.. :: .::  :..   
NP_001 SMPPLFWRHQGTSRD-DECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYH
          160        170       180       190       200       210   

              250       260           270       280       290      
pF1KB9 KQTPNRTGKRLTRAQLITDS-PGSTSSVTS---INSRVPDVPSESGSPVYVNQVKVRVSD
       :.  .: .:. . .:.. .:   ::.::..   ... . : :: . . .. . :.   :.
NP_001 KRQASRIAKEEVNGQVLLESGEKSTKSVSTSYVLEKSLSD-PSTDFDKIH-STVRSLRSE
           220       230       240       250        260        270 

        300           310       320       330       340       350  
pF1KB9 ALLEK----KKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFD
          ::    .:. ..:::::. :::.:::::..::::::.  ::. .: : : .   . .
NP_001 FKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVC-DKCKISEEMSN
             280       290       300       310        320       330

            360       370       380       390
pF1KB9 FFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCTS
       :..:::::::::::.:::. :::::.::.::.: .:  
NP_001 FLAWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC  
              340       350       360        

>>NP_000857 (OMIM: 182134) 5-hydroxytryptamine receptor   (366 aa)
 initn: 1109 init1: 617 opt: 1139  Z-score: 1180.9  bits: 227.2 E(85289): 4.9e-59
Smith-Waterman score: 1139; 48.9% identity (75.4% similar) in 366 aa overlap (32-388:5-366)

              10        20        30        40         50        60
pF1KB9 EEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSIS-LPWKVLLVMLLALIT
                                     : : ..   .. .. .: :.:. . :. ..
NP_000                           MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLA
                                         10        20        30    

               70        80        90       100       110       120
pF1KB9 LATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQV
       : ::  :..:::..  ::::: :::::: ::::::.::..::::.: .: :   : .:::
NP_000 LMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQV
           40        50        60        70        80        90    

              130       140       150       160       170       180
pF1KB9 VCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISI
       :::.::: :::::: ::::: .:::::: ::::::::. :::::.:..::..::..:. :
NP_000 VCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFI
          100       110       120       130       140       150    

              190       200       210       220       230       240
pF1KB9 SLPPFFWRQAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIL
       :.::.:::.  . .. .::... :::. :.::: ::::.:  :.. :: .::  :..   
NP_000 SMPPLFWRHQGTSRD-DECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYH
          160        170       180       190       200       210   

              250       260           270       280       290      
pF1KB9 KQTPNRTGKRLTRAQLITDS-PGSTSSVTS---INSRVPDVPSESGSPVYVNQVKVRVSD
       :.  .: .:. . .:.. .:   ::.::..   ... . : :: . . .. . :.   :.
NP_000 KRQASRIAKEEVNGQVLLESGEKSTKSVSTSYVLEKSLSD-PSTDFDKIH-STVRSLRSE
           220       230       240       250        260        270 

        300           310       320       330       340       350  
pF1KB9 ALLEK----KKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFD
          ::    .:. ..:::::. :::.:::::..::::::.  ::. .: : : .   . .
NP_000 FKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVC-DKCKISEEMSN
             280       290       300       310        320       330

            360       370       380       390
pF1KB9 FFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCTS
       :..:::::::::::.:::. :::::.::.::.: .:  
NP_000 FLAWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC  
              340       350       360        

>>NP_001309137 (OMIM: 182134) 5-hydroxytryptamine recept  (366 aa)
 initn: 1109 init1: 617 opt: 1139  Z-score: 1180.9  bits: 227.2 E(85289): 4.9e-59
Smith-Waterman score: 1139; 48.9% identity (75.4% similar) in 366 aa overlap (32-388:5-366)

              10        20        30        40         50        60
pF1KB9 EEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSIS-LPWKVLLVMLLALIT
                                     : : ..   .. .. .: :.:. . :. ..
NP_001                           MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLA
                                         10        20        30    

               70        80        90       100       110       120
pF1KB9 LATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQV
       : ::  :..:::..  ::::: :::::: ::::::.::..::::.: .: :   : .:::
NP_001 LMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQV
           40        50        60        70        80        90    

              130       140       150       160       170       180
pF1KB9 VCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISI
       :::.::: :::::: ::::: .:::::: ::::::::. :::::.:..::..::..:. :
NP_001 VCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFI
          100       110       120       130       140       150    

              190       200       210       220       230       240
pF1KB9 SLPPFFWRQAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIL
       :.::.:::.  . .. .::... :::. :.::: ::::.:  :.. :: .::  :..   
NP_001 SMPPLFWRHQGTSRD-DECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYH
          160        170       180       190       200       210   

              250       260           270       280       290      
pF1KB9 KQTPNRTGKRLTRAQLITDS-PGSTSSVTS---INSRVPDVPSESGSPVYVNQVKVRVSD
       :.  .: .:. . .:.. .:   ::.::..   ... . : :: . . .. . :.   :.
NP_001 KRQASRIAKEEVNGQVLLESGEKSTKSVSTSYVLEKSLSD-PSTDFDKIH-STVRSLRSE
           220       230       240       250        260        270 

        300           310       320       330       340       350  
pF1KB9 ALLEK----KKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFD
          ::    .:. ..:::::. :::.:::::..::::::.  ::. .: : : .   . .
NP_001 FKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVC-DKCKISEEMSN
             280       290       300       310        320       330

            360       370       380       390
pF1KB9 FFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCTS
       :..:::::::::::.:::. :::::.::.::.: .:  
NP_001 FLAWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC  
              340       350       360        

>>XP_011531966 (OMIM: 182134) PREDICTED: 5-hydroxytrypta  (366 aa)
 initn: 1109 init1: 617 opt: 1139  Z-score: 1180.9  bits: 227.2 E(85289): 4.9e-59
Smith-Waterman score: 1139; 48.9% identity (75.4% similar) in 366 aa overlap (32-388:5-366)

              10        20        30        40         50        60
pF1KB9 EEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSIS-LPWKVLLVMLLALIT
                                     : : ..   .. .. .: :.:. . :. ..
XP_011                           MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLA
                                         10        20        30    

               70        80        90       100       110       120
pF1KB9 LATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQV
       : ::  :..:::..  ::::: :::::: ::::::.::..::::.: .: :   : .:::
XP_011 LMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQV
           40        50        60        70        80        90    

              130       140       150       160       170       180
pF1KB9 VCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISI
       :::.::: :::::: ::::: .:::::: ::::::::. :::::.:..::..::..:. :
XP_011 VCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFI
          100       110       120       130       140       150    

              190       200       210       220       230       240
pF1KB9 SLPPFFWRQAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIL
       :.::.:::.  . .. .::... :::. :.::: ::::.:  :.. :: .::  :..   
XP_011 SMPPLFWRHQGTSRD-DECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYH
          160        170       180       190       200       210   

              250       260           270       280       290      
pF1KB9 KQTPNRTGKRLTRAQLITDS-PGSTSSVTS---INSRVPDVPSESGSPVYVNQVKVRVSD
       :.  .: .:. . .:.. .:   ::.::..   ... . : :: . . .. . :.   :.
XP_011 KRQASRIAKEEVNGQVLLESGEKSTKSVSTSYVLEKSLSD-PSTDFDKIH-STVRSLRSE
           220       230       240       250        260        270 

        300           310       320       330       340       350  
pF1KB9 ALLEK----KKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFD
          ::    .:. ..:::::. :::.:::::..::::::.  ::. .: : : .   . .
XP_011 FKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVC-DKCKISEEMSN
             280       290       300       310        320       330

            360       370       380       390
pF1KB9 FFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCTS
       :..:::::::::::.:::. :::::.::.::.: .:  
XP_011 FLAWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC  
              340       350       360        

>>NP_001309139 (OMIM: 182134) 5-hydroxytryptamine recept  (366 aa)
 initn: 1109 init1: 617 opt: 1139  Z-score: 1180.9  bits: 227.2 E(85289): 4.9e-59
Smith-Waterman score: 1139; 48.9% identity (75.4% similar) in 366 aa overlap (32-388:5-366)

              10        20        30        40         50        60
pF1KB9 EEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSIS-LPWKVLLVMLLALIT
                                     : : ..   .. .. .: :.:. . :. ..
NP_001                           MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLA
                                         10        20        30    

               70        80        90       100       110       120
pF1KB9 LATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQV
       : ::  :..:::..  ::::: :::::: ::::::.::..::::.: .: :   : .:::
NP_001 LMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQV
           40        50        60        70        80        90    

              130       140       150       160       170       180
pF1KB9 VCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISI
       :::.::: :::::: ::::: .:::::: ::::::::. :::::.:..::..::..:. :
NP_001 VCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFI
          100       110       120       130       140       150    

              190       200       210       220       230       240
pF1KB9 SLPPFFWRQAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIL
       :.::.:::.  . .. .::... :::. :.::: ::::.:  :.. :: .::  :..   
NP_001 SMPPLFWRHQGTSRD-DECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYH
          160        170       180       190       200       210   

              250       260           270       280       290      
pF1KB9 KQTPNRTGKRLTRAQLITDS-PGSTSSVTS---INSRVPDVPSESGSPVYVNQVKVRVSD
       :.  .: .:. . .:.. .:   ::.::..   ... . : :: . . .. . :.   :.
NP_001 KRQASRIAKEEVNGQVLLESGEKSTKSVSTSYVLEKSLSD-PSTDFDKIH-STVRSLRSE
           220       230       240       250        260        270 

        300           310       320       330       340       350  
pF1KB9 ALLEK----KKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFD
          ::    .:. ..:::::. :::.:::::..::::::.  ::. .: : : .   . .
NP_001 FKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVC-DKCKISEEMSN
             280       290       300       310        320       330

            360       370       380       390
pF1KB9 FFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCTS
       :..:::::::::::.:::. :::::.::.::.: .:  
NP_001 FLAWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC  
              340       350       360        

>>XP_005264808 (OMIM: 182134) PREDICTED: 5-hydroxytrypta  (366 aa)
 initn: 1109 init1: 617 opt: 1139  Z-score: 1180.9  bits: 227.2 E(85289): 4.9e-59
Smith-Waterman score: 1139; 48.9% identity (75.4% similar) in 366 aa overlap (32-388:5-366)

              10        20        30        40         50        60
pF1KB9 EEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSIS-LPWKVLLVMLLALIT
                                     : : ..   .. .. .: :.:. . :. ..
XP_005                           MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLA
                                         10        20        30    

               70        80        90       100       110       120
pF1KB9 LATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQV
       : ::  :..:::..  ::::: :::::: ::::::.::..::::.: .: :   : .:::
XP_005 LMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQV
           40        50        60        70        80        90    

              130       140       150       160       170       180
pF1KB9 VCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISI
       :::.::: :::::: ::::: .:::::: ::::::::. :::::.:..::..::..:. :
XP_005 VCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFI
          100       110       120       130       140       150    

              190       200       210       220       230       240
pF1KB9 SLPPFFWRQAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIL
       :.::.:::.  . .. .::... :::. :.::: ::::.:  :.. :: .::  :..   
XP_005 SMPPLFWRHQGTSRD-DECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYH
          160        170       180       190       200       210   

              250       260           270       280       290      
pF1KB9 KQTPNRTGKRLTRAQLITDS-PGSTSSVTS---INSRVPDVPSESGSPVYVNQVKVRVSD
       :.  .: .:. . .:.. .:   ::.::..   ... . : :: . . .. . :.   :.
XP_005 KRQASRIAKEEVNGQVLLESGEKSTKSVSTSYVLEKSLSD-PSTDFDKIH-STVRSLRSE
           220       230       240       250        260        270 

        300           310       320       330       340       350  
pF1KB9 ALLEK----KKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFD
          ::    .:. ..:::::. :::.:::::..::::::.  ::. .: : : .   . .
XP_005 FKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVC-DKCKISEEMSN
             280       290       300       310        320       330

            360       370       380       390
pF1KB9 FFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCTS
       :..:::::::::::.:::. :::::.::.::.: .:  
XP_005 FLAWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC  
              340       350       360        

>>NP_000856 (OMIM: 182132) 5-hydroxytryptamine receptor   (365 aa)
 initn: 1063 init1: 627 opt: 1061  Z-score: 1100.6  bits: 212.3 E(85289): 1.5e-54
Smith-Waterman score: 1061; 47.8% identity (71.2% similar) in 364 aa overlap (32-387:5-362)

              10        20        30        40        50        60 
pF1KB9 EEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSISLPWKVLLVMLLALITL
                                     ::...  .     ..  :.:. : :..:: 
NP_000                           MNITNCTTEASMAIRPKTITEKMLICMTLVVITT
                                         10        20        30    

              70        80        90       100       110       120 
pF1KB9 ATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVV
        ::: :  :: ..  :.::: :::::: :::::::::..::::.: .: :  :: ::  .
NP_000 LTTLLNLAVIMAIGTTKKLHQPANYLICSLAVTDLLVAVLVMPLSIIYIVMDRWKLGYFL
           40        50        60        70        80        90    

             130       140       150       160       170       180 
pF1KB9 CDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISIS
       :. ::: :.:::: :::::::::::::::::.:.::. ::: ::::.::  ::..:: ::
NP_000 CEVWLSVDMTCCTCSILHLCVIALDRYWAITNAIEYARKRTAKRAALMILTVWTISIFIS
          100       110       120       130       140       150    

              190       200       210       220       230       240
pF1KB9 LPPFFWR-QAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIL
       .::.::: . .     :.:... ::..::.:::.::::.:  :.. :: :::  :.:   
NP_000 MPPLFWRSHRRLSPPPSQCTIQHDHVIYTIYSTLGAFYIPLTLILILYYRIYHAAKSLYQ
          160       170       180       190       200       210    

               250         260       270       280       290       
pF1KB9 KQTPNR-TGKRLTRAQ--LITDSPGSTSSVTSINSRVPDVPSESGSPVYVNQVKVRVSDA
       :.  .:  ..: : .:  . . .  .:  :.....  : .  :.    .  ....   : 
NP_000 KRGSSRHLSNRSTDSQNSFASCKLTQTFCVSDFSTSDPTTEFEK----FHASIRIPPFDN
          220       230       240       250           260       270

           300       310       320       330       340       350   
pF1KB9 LL----EKKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFDF
        :    :.... ..:::::.. ::.::::::. ::::::  :.. .   .   ..:  ::
NP_000 DLDHPGERQQISSTRERKAARILGLILGAFILSWLPFFIKELIVGLSIYTVSSEVA--DF
              280       290       300       310       320          

           360       370       380       390
pF1KB9 FTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCTS
       .:::::.::::::..::  ::::: ::.:::: .   
NP_000 LTWLGYVNSLINPLLYTSFNEDFKLAFKKLIRCREHT
      330       340       350       360     

>>XP_011534091 (OMIM: 182132) PREDICTED: 5-hydroxytrypta  (365 aa)
 initn: 1063 init1: 627 opt: 1061  Z-score: 1100.6  bits: 212.3 E(85289): 1.5e-54
Smith-Waterman score: 1061; 47.8% identity (71.2% similar) in 364 aa overlap (32-387:5-362)

              10        20        30        40        50        60 
pF1KB9 EEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSISLPWKVLLVMLLALITL
                                     ::...  .     ..  :.:. : :..:: 
XP_011                           MNITNCTTEASMAIRPKTITEKMLICMTLVVITT
                                         10        20        30    

              70        80        90       100       110       120 
pF1KB9 ATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVV
        ::: :  :: ..  :.::: :::::: :::::::::..::::.: .: :  :: ::  .
XP_011 LTTLLNLAVIMAIGTTKKLHQPANYLICSLAVTDLLVAVLVMPLSIIYIVMDRWKLGYFL
           40        50        60        70        80        90    

             130       140       150       160       170       180 
pF1KB9 CDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISIS
       :. ::: :.:::: :::::::::::::::::.:.::. ::: ::::.::  ::..:: ::
XP_011 CEVWLSVDMTCCTCSILHLCVIALDRYWAITNAIEYARKRTAKRAALMILTVWTISIFIS
          100       110       120       130       140       150    

              190       200       210       220       230       240
pF1KB9 LPPFFWR-QAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIL
       .::.::: . .     :.:... ::..::.:::.::::.:  :.. :: :::  :.:   
XP_011 MPPLFWRSHRRLSPPPSQCTIQHDHVIYTIYSTLGAFYIPLTLILILYYRIYHAAKSLYQ
          160       170       180       190       200       210    

               250         260       270       280       290       
pF1KB9 KQTPNR-TGKRLTRAQ--LITDSPGSTSSVTSINSRVPDVPSESGSPVYVNQVKVRVSDA
       :.  .:  ..: : .:  . . .  .:  :.....  : .  :.    .  ....   : 
XP_011 KRGSSRHLSNRSTDSQNSFASCKLTQTFCVSDFSTSDPTTEFEK----FHASIRIPPFDN
          220       230       240       250           260       270

           300       310       320       330       340       350   
pF1KB9 LL----EKKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFDF
        :    :.... ..:::::.. ::.::::::. ::::::  :.. .   .   ..:  ::
XP_011 DLDHPGERQQISSTRERKAARILGLILGAFILSWLPFFIKELIVGLSIYTVSSEVA--DF
              280       290       300       310       320          

           360       370       380       390
pF1KB9 FTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCTS
       .:::::.::::::..::  ::::: ::.:::: .   
XP_011 LTWLGYVNSLINPLLYTSFNEDFKLAFKKLIRCREHT
      330       340       350       360     




390 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 19:48:47 2016 done: Fri Nov  4 19:48:48 2016
 Total Scan time:  8.980 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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