Result of InterProScan for pFN21AB9849
hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/Pfam.bin
Sequence file:            /tmp/20080304/iprscan-20080304-20292202/chunk_1/iprscan-20080304-20292202.nocrc
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Query sequence: pF1KB9849
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00001.12.fs 7 transmembrane receptor (rhodopsin family)    191.6    8.7e-64   1
PF00001.12.ls 7 transmembrane receptor (rhodopsin family)    193.5    4.7e-55   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00001.12.fs   1/1      50   306 ..     1   272 []   191.6  8.7e-64
PF00001.12.ls   1/1      50   306 ..     1   272 []   193.5  4.7e-55

Alignments of top-scoring domains:
PF00001.12.fs: domain 1 of 1, from 50 to 306: score 191.6, E = 8.7e-64
                   *->GNlLVilvilrtkklr..tptnifilNLAvADLLflltlppwalyyl
                       N+++++++l+  +l++ +++ +++++LAv+D L++++lp+ ++yy+
   pF1KB9849    50    LNAVALYIFLC--RLKtwNASTTYMFHLAVSDALYAASLPLLVYYYA 94   

                   vggedWpfGsalCklvtaldvvnmyaSillLtaISiDRYlAIvhPlryrr
                    g  +Wpf+++lCklv +l+++n+y+Sil+Lt+IS+ R+l + +Plr+ r
   pF1KB9849    95 RG-DHWPFSTVLCKLVRFLFYTNLYCSILFLTCISVHRCLGVLRPLRSLR 143  

                   rrtsprrAkvvillvWvlalllslPpllfswvktveegngv.vnvttCli
                   + +  r A+ v ++vWvl l++  P l+f  v+t++ g++v++ +t+  +
   pF1KB9849   144 WGR-ARYARRVAGAVWVLVLACQAPVLYF--VTTSARGGRVtCHDTSAPE 190  

                   dfpevstasvktwlvsyallstlvgFvlPllvilvcYtrIlrtlrkra..
                    f  +          +y  + + + F +P+ vilvcY +++r+l k a +
   pF1KB9849   191 LFSRFV---------AYSSVMLGLLFAVPFAVILVCYVLMARRLLKPAyg 231  

                   ....rkgaskkrsskerkaaktllvvvvvFvlCWlPyfivllldtlc.ls
                   ++++ +       +++rk ++t++vv+ vF+lC+lP++++  l + +++ 
   pF1KB9849   232 tsggLP-------RAKRKSVRTIAVVLAVFALCFLPFHVTRTLYYSFrSL 274  

                   iimsssCelervlptallvtlwLayvNsclNPiIY<-*
                       +sC   + ++ a+ vt+ La +Nscl+P++Y   
   pF1KB9849   275 ---DLSCHTLNAINMAYKVTRPLASANSCLDPVLY    306  

PF00001.12.ls: domain 1 of 1, from 50 to 306: score 193.5, E = 4.7e-55
                   *->GNlLVilvilrtkklr..tptnifilNLAvADLLflltlppwalyyl
                       N+++++++l+  +l++ +++ +++++LAv+D L++++lp+ ++yy+
   pF1KB9849    50    LNAVALYIFLC--RLKtwNASTTYMFHLAVSDALYAASLPLLVYYYA 94   

                   vggedWpfGsalCklvtaldvvnmyaSillLtaISiDRYlAIvhPlryrr
                    g  +Wpf+++lCklv +l+++n+y+Sil+Lt+IS+ R+l + +Plr+ r
   pF1KB9849    95 RG-DHWPFSTVLCKLVRFLFYTNLYCSILFLTCISVHRCLGVLRPLRSLR 143  

                   rrtsprrAkvvillvWvlalllslPpllfswvktveegngv.vnvttCli
                   + +  r A+ v ++vWvl l++  P l+f  v+t++ g++v++ +t+  +
   pF1KB9849   144 WGR-ARYARRVAGAVWVLVLACQAPVLYF--VTTSARGGRVtCHDTSAPE 190  

                   dfpevstasvktwlvsyallstlvgFvlPllvilvcYtrIlrtlrkra..
                    f  +          +y  + + + F +P+ vilvcY +++r+l k a +
   pF1KB9849   191 LFSRFV---------AYSSVMLGLLFAVPFAVILVCYVLMARRLLKPAyg 231  

                   ....rkgaskkrsskerkaaktllvvvvvFvlCWlPyfivllldtlc.ls
                   ++++ +       +++rk ++t++vv+ vF+lC+lP++++  l + +++ 
   pF1KB9849   232 tsggLP-------RAKRKSVRTIAVVLAVFALCFLPFHVTRTLYYSFrSL 274  

                   iimsssCelervlptallvtlwLayvNsclNPiIY<-*
                       +sC   + ++ a+ vt+ La +Nscl+P++Y   
   pF1KB9849   275 ---DLSCHTLNAINMAYKVTRPLASANSCLDPVLY    306  

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