Result of FASTA (omim) for pFN21AB9637
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9637, 411 aa
  1>>>pF1KB9637 411 - 411 aa - 411 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.9485+/-0.000396; mu= -5.1138+/- 0.025
 mean_var=628.0304+/-156.819, 0's: 0 Z-trim(123.9): 110  B-trim: 2608 in 1/58
 Lambda= 0.051178
 statistics sampled from 44488 (44645) to 44488 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.815), E-opt: 0.2 (0.523), width:  16
 Scan time: 10.580

The best scores are:                                      opt bits E(85289)
NP_001275969 (OMIM: 601410,603044) zinc finger pro ( 411) 2862 226.0 1.4e-58
NP_001275966 (OMIM: 601410,603044) zinc finger pro ( 411) 2862 226.0 1.4e-58
NP_001074425 (OMIM: 601410,603044) zinc finger pro ( 411) 2862 226.0 1.4e-58
NP_001304089 (OMIM: 601410,603044) zinc finger pro ( 411) 2862 226.0 1.4e-58
NP_001275970 (OMIM: 601410,603044) zinc finger pro ( 411) 2862 226.0 1.4e-58
NP_001275968 (OMIM: 601410,603044) zinc finger pro ( 411) 2862 226.0 1.4e-58
NP_001074424 (OMIM: 601410,603044) zinc finger pro ( 411) 2862 226.0 1.4e-58
NP_001304087 (OMIM: 601410,603044) zinc finger pro ( 411) 2862 226.0 1.4e-58
NP_001275967 (OMIM: 601410,603044) zinc finger pro ( 411) 2862 226.0 1.4e-58
NP_001074423 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001275977 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_006709 (OMIM: 601410,603044) zinc finger protei ( 463) 2862 226.0 1.5e-58
NP_001275976 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001074422 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001304088 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001275978 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001275975 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001074420 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001304085 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001275971 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001304091 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001074421 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001304090 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001275973 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001275972 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001304086 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
NP_001275974 (OMIM: 601410,603044) zinc finger pro ( 463) 2862 226.0 1.5e-58
XP_005260493 (OMIM: 604866) PREDICTED: zinc finger ( 496) 1096 95.7 2.7e-19
XP_011527166 (OMIM: 604866) PREDICTED: zinc finger ( 496) 1096 95.7 2.7e-19
NP_002648 (OMIM: 604866) zinc finger protein PLAGL ( 496) 1096 95.7 2.7e-19
XP_011527165 (OMIM: 604866) PREDICTED: zinc finger ( 496) 1096 95.7 2.7e-19
XP_011515846 (OMIM: 181030,603026) PREDICTED: zinc ( 418) 1028 90.6   8e-18
NP_001108107 (OMIM: 181030,603026) zinc finger pro ( 418) 1028 90.6   8e-18
XP_016869066 (OMIM: 181030,603026) PREDICTED: zinc ( 418) 1028 90.6   8e-18
NP_002646 (OMIM: 181030,603026) zinc finger protei ( 500) 1028 90.7 8.9e-18
XP_016869065 (OMIM: 181030,603026) PREDICTED: zinc ( 500) 1028 90.7 8.9e-18
NP_001108106 (OMIM: 181030,603026) zinc finger pro ( 500) 1028 90.7 8.9e-18


>>NP_001275969 (OMIM: 601410,603044) zinc finger protein  (411 aa)
 initn: 2862 init1: 2862 opt: 2862  Z-score: 1172.8  bits: 226.0 E(85289): 1.4e-58
Smith-Waterman score: 2862; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)

               10        20        30        40        50        60
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
              310       320       330       340       350       360

              370       380       390       400       410 
pF1KB9 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
              370       380       390       400       410 

>>NP_001275966 (OMIM: 601410,603044) zinc finger protein  (411 aa)
 initn: 2862 init1: 2862 opt: 2862  Z-score: 1172.8  bits: 226.0 E(85289): 1.4e-58
Smith-Waterman score: 2862; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)

               10        20        30        40        50        60
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
              310       320       330       340       350       360

              370       380       390       400       410 
pF1KB9 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
              370       380       390       400       410 

>>NP_001074425 (OMIM: 601410,603044) zinc finger protein  (411 aa)
 initn: 2862 init1: 2862 opt: 2862  Z-score: 1172.8  bits: 226.0 E(85289): 1.4e-58
Smith-Waterman score: 2862; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)

               10        20        30        40        50        60
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
              310       320       330       340       350       360

              370       380       390       400       410 
pF1KB9 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
              370       380       390       400       410 

>>NP_001304089 (OMIM: 601410,603044) zinc finger protein  (411 aa)
 initn: 2862 init1: 2862 opt: 2862  Z-score: 1172.8  bits: 226.0 E(85289): 1.4e-58
Smith-Waterman score: 2862; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)

               10        20        30        40        50        60
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
              310       320       330       340       350       360

              370       380       390       400       410 
pF1KB9 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
              370       380       390       400       410 

>>NP_001275970 (OMIM: 601410,603044) zinc finger protein  (411 aa)
 initn: 2862 init1: 2862 opt: 2862  Z-score: 1172.8  bits: 226.0 E(85289): 1.4e-58
Smith-Waterman score: 2862; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)

               10        20        30        40        50        60
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
              310       320       330       340       350       360

              370       380       390       400       410 
pF1KB9 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
              370       380       390       400       410 

>>NP_001275968 (OMIM: 601410,603044) zinc finger protein  (411 aa)
 initn: 2862 init1: 2862 opt: 2862  Z-score: 1172.8  bits: 226.0 E(85289): 1.4e-58
Smith-Waterman score: 2862; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)

               10        20        30        40        50        60
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
              310       320       330       340       350       360

              370       380       390       400       410 
pF1KB9 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
              370       380       390       400       410 

>>NP_001074424 (OMIM: 601410,603044) zinc finger protein  (411 aa)
 initn: 2862 init1: 2862 opt: 2862  Z-score: 1172.8  bits: 226.0 E(85289): 1.4e-58
Smith-Waterman score: 2862; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)

               10        20        30        40        50        60
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
              310       320       330       340       350       360

              370       380       390       400       410 
pF1KB9 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
              370       380       390       400       410 

>>NP_001304087 (OMIM: 601410,603044) zinc finger protein  (411 aa)
 initn: 2862 init1: 2862 opt: 2862  Z-score: 1172.8  bits: 226.0 E(85289): 1.4e-58
Smith-Waterman score: 2862; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)

               10        20        30        40        50        60
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
              310       320       330       340       350       360

              370       380       390       400       410 
pF1KB9 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
              370       380       390       400       410 

>>NP_001275967 (OMIM: 601410,603044) zinc finger protein  (411 aa)
 initn: 2862 init1: 2862 opt: 2862  Z-score: 1172.8  bits: 226.0 E(85289): 1.4e-58
Smith-Waterman score: 2862; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)

               10        20        30        40        50        60
pF1KB9 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATHSPQKSHQCAHCEKTFNRKDHLKNHLQTHDPNKMAFGCEECGKKYNTMLGYKRHLAL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAASSGDLTCGVCALELGSTEVLLDHLKAHAEEKPPSGTKEKKHQCDHCERCFYTRKDVR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHLVVHTGCKDFLCQFCAQRFGRKDHLTRHTKKTHSQELMKESLQTGDLLSTFHTISPSF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLKAAALPPFPLGASAQNGLASSLPAEVHSLTLSPPEQAAQPMQPLPESLASLHPSVSPG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPPPPLPNHKYNTTSTSYSPLASLPLKADTKGFCNISLFEDLPLQEPQSPQKLNPGFDLA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGNAGKVNLPKELPADAVNLTIPASLDLSPLLGFWQLPPPATQNTFGNSTLALGPGESLP
              310       320       330       340       350       360

              370       380       390       400       410 
pF1KB9 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRLSCLGQQQQEPPLAMGTVSLGQLPLPPIPHVFSAGTGSAILPHFHHAFR
              370       380       390       400       410 

>>NP_001074423 (OMIM: 601410,603044) zinc finger protein  (463 aa)
 initn: 2862 init1: 2862 opt: 2862  Z-score: 1172.3  bits: 226.0 E(85289): 1.5e-58
Smith-Waterman score: 2862; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:53-463)

                                             10        20        30
pF1KB9                               MATHSPQKSHQCAHCEKTFNRKDHLKNHLQ
                                     ::::::::::::::::::::::::::::::
NP_001 NYSHSRERPYKCVQPDCGKAFVSRYKLMRHMATHSPQKSHQCAHCEKTFNRKDHLKNHLQ
             30        40        50        60        70        80  

               40        50        60        70        80        90
pF1KB9 THDPNKMAFGCEECGKKYNTMLGYKRHLALHAASSGDLTCGVCALELGSTEVLLDHLKAH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THDPNKMAFGCEECGKKYNTMLGYKRHLALHAASSGDLTCGVCALELGSTEVLLDHLKAH
             90       100       110       120       130       140  

              100       110       120       130       140       150
pF1KB9 AEEKPPSGTKEKKHQCDHCERCFYTRKDVRRHLVVHTGCKDFLCQFCAQRFGRKDHLTRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEEKPPSGTKEKKHQCDHCERCFYTRKDVRRHLVVHTGCKDFLCQFCAQRFGRKDHLTRH
            150       160       170       180       190       200  

              160       170       180       190       200       210
pF1KB9 TKKTHSQELMKESLQTGDLLSTFHTISPSFQLKAAALPPFPLGASAQNGLASSLPAEVHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TKKTHSQELMKESLQTGDLLSTFHTISPSFQLKAAALPPFPLGASAQNGLASSLPAEVHS
            210       220       230       240       250       260  

              220       230       240       250       260       270
pF1KB9 LTLSPPEQAAQPMQPLPESLASLHPSVSPGSPPPPLPNHKYNTTSTSYSPLASLPLKADT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTLSPPEQAAQPMQPLPESLASLHPSVSPGSPPPPLPNHKYNTTSTSYSPLASLPLKADT
            270       280       290       300       310       320  

              280       290       300       310       320       330
pF1KB9 KGFCNISLFEDLPLQEPQSPQKLNPGFDLAKGNAGKVNLPKELPADAVNLTIPASLDLSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGFCNISLFEDLPLQEPQSPQKLNPGFDLAKGNAGKVNLPKELPADAVNLTIPASLDLSP
            330       340       350       360       370       380  

              340       350       360       370       380       390
pF1KB9 LLGFWQLPPPATQNTFGNSTLALGPGESLPHRLSCLGQQQQEPPLAMGTVSLGQLPLPPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLGFWQLPPPATQNTFGNSTLALGPGESLPHRLSCLGQQQQEPPLAMGTVSLGQLPLPPI
            390       400       410       420       430       440  

              400       410 
pF1KB9 PHVFSAGTGSAILPHFHHAFR
       :::::::::::::::::::::
NP_001 PHVFSAGTGSAILPHFHHAFR
            450       460   




411 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 17:54:27 2016 done: Fri Nov  4 17:54:28 2016
 Total Scan time: 10.580 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com