Result of FASTA (omim) for
pFN21AB9549
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9549, 468 aa
1>>>pF1KB9549 468 - 468 aa - 468 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9126+/-0.000366; mu= 15.4542+/- 0.023
mean_var=92.6453+/-19.151, 0's: 0 Z-trim(115.3): 379 B-trim: 1335 in 1/52
Lambda= 0.133249
statistics sampled from 25221 (25618) to 25221 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.3), width: 16
Scan time: 9.650
The best scores are: opt bits E(85289)
XP_011528541 (OMIM: 170998) PREDICTED: peroxisome ( 468) 3135 613.0 5.4e-175
XP_005261712 (OMIM: 170998) PREDICTED: peroxisome ( 468) 3135 613.0 5.4e-175
XP_006724332 (OMIM: 170998) PREDICTED: peroxisome ( 468) 3135 613.0 5.4e-175
XP_011528542 (OMIM: 170998) PREDICTED: peroxisome ( 468) 3135 613.0 5.4e-175
XP_011528543 (OMIM: 170998) PREDICTED: peroxisome ( 468) 3135 613.0 5.4e-175
NP_005027 (OMIM: 170998) peroxisome proliferator-a ( 468) 3135 613.0 5.4e-175
XP_006724333 (OMIM: 170998) PREDICTED: peroxisome ( 468) 3135 613.0 5.4e-175
XP_005261713 (OMIM: 170998) PREDICTED: peroxisome ( 468) 3135 613.0 5.4e-175
XP_011528545 (OMIM: 170998) PREDICTED: peroxisome ( 468) 3135 613.0 5.4e-175
XP_011528544 (OMIM: 170998) PREDICTED: peroxisome ( 468) 3135 613.0 5.4e-175
NP_001001928 (OMIM: 170998) peroxisome proliferato ( 468) 3135 613.0 5.4e-175
XP_016884328 (OMIM: 170998) PREDICTED: peroxisome ( 334) 1955 386.1 8.1e-107
XP_011528546 (OMIM: 170998) PREDICTED: peroxisome ( 334) 1955 386.1 8.1e-107
XP_011528547 (OMIM: 170998) PREDICTED: peroxisome ( 334) 1955 386.1 8.1e-107
XP_016866463 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1865 368.9 1.6e-101
XP_006715183 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1865 368.9 1.6e-101
XP_011513012 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1865 368.9 1.6e-101
XP_006715186 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1865 368.9 1.6e-101
NP_006229 (OMIM: 600409) peroxisome proliferator-a ( 441) 1865 368.9 1.6e-101
XP_005249250 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1865 368.9 1.6e-101
NP_001165289 (OMIM: 600409) peroxisome proliferato ( 441) 1865 368.9 1.6e-101
XP_016866461 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1865 368.9 1.6e-101
XP_016866460 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1865 368.9 1.6e-101
XP_011513009 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1865 368.9 1.6e-101
XP_016866462 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1865 368.9 1.6e-101
XP_011513011 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1865 368.9 1.6e-101
NP_001165290 (OMIM: 600409) peroxisome proliferato ( 402) 1862 368.2 2.2e-101
NP_619726 (OMIM: 125853,601487,601665,604367,60933 ( 477) 1714 339.8 9.4e-93
NP_619725 (OMIM: 125853,601487,601665,604367,60933 ( 477) 1714 339.8 9.4e-93
XP_011532143 (OMIM: 125853,601487,601665,604367,60 ( 477) 1714 339.8 9.4e-93
NP_005028 (OMIM: 125853,601487,601665,604367,60933 ( 477) 1714 339.8 9.4e-93
NP_056953 (OMIM: 125853,601487,601665,604367,60933 ( 505) 1714 339.9 9.9e-93
XP_016884329 (OMIM: 170998) PREDICTED: peroxisome ( 265) 1529 304.1 3e-82
NP_803184 (OMIM: 600409) peroxisome proliferator-a ( 361) 1466 292.1 1.7e-78
XP_016866464 (OMIM: 600409) PREDICTED: peroxisome ( 365) 1466 292.1 1.7e-78
XP_011532144 (OMIM: 125853,601487,601665,604367,60 ( 445) 1368 273.3 9.4e-73
NP_001165291 (OMIM: 600409) peroxisome proliferato ( 343) 1346 269.0 1.4e-71
NP_001317544 (OMIM: 125853,601487,601665,604367,60 ( 250) 722 149.0 1.4e-35
XP_011532146 (OMIM: 125853,601487,601665,604367,60 ( 250) 722 149.0 1.4e-35
XP_011532145 (OMIM: 125853,601487,601665,604367,60 ( 278) 722 149.0 1.6e-35
XP_006713514 (OMIM: 602304) PREDICTED: nuclear rec ( 448) 447 96.3 1.9e-19
NP_001138897 (OMIM: 602304) nuclear receptor subfa ( 504) 447 96.3 2.1e-19
NP_055064 (OMIM: 268100,604485,611131) photorecept ( 410) 445 95.9 2.3e-19
NP_005117 (OMIM: 602304) nuclear receptor subfamil ( 579) 447 96.3 2.3e-19
NP_068370 (OMIM: 602408) nuclear receptor subfamil ( 614) 446 96.2 2.7e-19
NP_001273031 (OMIM: 603849) nuclear receptor subfa ( 422) 441 95.1 4e-19
NP_003260 (OMIM: 603849) nuclear receptor subfamil ( 385) 425 92.0 3.1e-18
NP_001277145 (OMIM: 180220,615524) retinoic acid r ( 455) 397 86.7 1.5e-16
NP_008845 (OMIM: 601972) nuclear receptor ROR-beta ( 459) 397 86.7 1.5e-16
NP_001278849 (OMIM: 180245) retinoic acid receptor ( 435) 392 85.7 2.8e-16
>>XP_011528541 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 3135 init1: 3135 opt: 3135 Z-score: 3262.6 bits: 613.0 E(85289): 5.4e-175
Smith-Waterman score: 3135; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KB9 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
370 380 390 400 410 420
430 440 450 460
pF1KB9 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
430 440 450 460
>>XP_005261712 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 3135 init1: 3135 opt: 3135 Z-score: 3262.6 bits: 613.0 E(85289): 5.4e-175
Smith-Waterman score: 3135; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KB9 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
370 380 390 400 410 420
430 440 450 460
pF1KB9 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
430 440 450 460
>>XP_006724332 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 3135 init1: 3135 opt: 3135 Z-score: 3262.6 bits: 613.0 E(85289): 5.4e-175
Smith-Waterman score: 3135; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KB9 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
370 380 390 400 410 420
430 440 450 460
pF1KB9 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
430 440 450 460
>>XP_011528542 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 3135 init1: 3135 opt: 3135 Z-score: 3262.6 bits: 613.0 E(85289): 5.4e-175
Smith-Waterman score: 3135; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KB9 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
370 380 390 400 410 420
430 440 450 460
pF1KB9 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
430 440 450 460
>>XP_011528543 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 3135 init1: 3135 opt: 3135 Z-score: 3262.6 bits: 613.0 E(85289): 5.4e-175
Smith-Waterman score: 3135; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KB9 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
370 380 390 400 410 420
430 440 450 460
pF1KB9 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
430 440 450 460
>>NP_005027 (OMIM: 170998) peroxisome proliferator-activ (468 aa)
initn: 3135 init1: 3135 opt: 3135 Z-score: 3262.6 bits: 613.0 E(85289): 5.4e-175
Smith-Waterman score: 3135; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KB9 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
370 380 390 400 410 420
430 440 450 460
pF1KB9 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
430 440 450 460
>>XP_006724333 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 3135 init1: 3135 opt: 3135 Z-score: 3262.6 bits: 613.0 E(85289): 5.4e-175
Smith-Waterman score: 3135; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KB9 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
370 380 390 400 410 420
430 440 450 460
pF1KB9 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
430 440 450 460
>>XP_005261713 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 3135 init1: 3135 opt: 3135 Z-score: 3262.6 bits: 613.0 E(85289): 5.4e-175
Smith-Waterman score: 3135; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KB9 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
370 380 390 400 410 420
430 440 450 460
pF1KB9 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
430 440 450 460
>>XP_011528545 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 3135 init1: 3135 opt: 3135 Z-score: 3262.6 bits: 613.0 E(85289): 5.4e-175
Smith-Waterman score: 3135; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KB9 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
370 380 390 400 410 420
430 440 450 460
pF1KB9 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
430 440 450 460
>>XP_011528544 (OMIM: 170998) PREDICTED: peroxisome prol (468 aa)
initn: 3135 init1: 3135 opt: 3135 Z-score: 3262.6 bits: 613.0 E(85289): 5.4e-175
Smith-Waterman score: 3135; 100.0% identity (100.0% similar) in 468 aa overlap (1-468:1-468)
10 20 30 40 50 60
pF1KB9 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVDTESPLCPLSPLEAGDLESPLSEEFLQEMGNIQEISQSIGEDSSGSFGFTEYQYLGSC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGSDGSVITDTLSPASSPSSVTYPVVPGSVDESPSGALNIECRICGDKASGYHYGVHACE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GCKGFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPRSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAKLKAEILTCEHDIEDSETADLKSLAKRIYEAYLKNFNMNKVKARVILSGKASNNPPFV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IHDMETLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKAIPGFANL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLNDQVTLLKYGVYEAIFAMLSSVMNKDGMLVAYGNGFITREFLKSLRKPFCDIMEPKFD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FAMKFNALELDDSDISLFVAAIICCGDRPGLLNVGHIEKMQEGIVHVLRLHLQSNHPDDI
370 380 390 400 410 420
430 440 450 460
pF1KB9 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLFPKLLQKMADLRQLVTEHAQLVQIIKKTESDAALHPLLQEIYRDMY
430 440 450 460
468 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:10:46 2016 done: Fri Nov 4 17:10:48 2016
Total Scan time: 9.650 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]