FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9385, 324 aa 1>>>pF1KB9385 324 - 324 aa - 324 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6650+/-0.00102; mu= 8.4715+/- 0.060 mean_var=108.6810+/-23.993, 0's: 0 Z-trim(105.9): 88 B-trim: 154 in 1/50 Lambda= 0.123026 statistics sampled from 8573 (8666) to 8573 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.639), E-opt: 0.2 (0.266), width: 16 Scan time: 2.360 The best scores are: opt bits E(32554) CCDS31306.1 BUB3 gene_id:9184|Hs108|chr10 ( 326) 2227 406.3 1.6e-113 CCDS7635.1 BUB3 gene_id:9184|Hs108|chr10 ( 328) 2227 406.4 1.6e-113 CCDS13458.1 RAE1 gene_id:8480|Hs108|chr20 ( 368) 663 128.8 6.6e-30 >>CCDS31306.1 BUB3 gene_id:9184|Hs108|chr10 (326 aa) initn: 2227 init1: 2227 opt: 2227 Z-score: 2151.4 bits: 406.3 E(32554): 1.6e-113 Smith-Waterman score: 2227; 100.0% identity (100.0% similar) in 324 aa overlap (1-324:1-324) 10 20 30 40 50 60 pF1KB9 MTGSNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MTGSNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 DCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 DCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 KLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 KLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 QTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 QTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 SFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMYE 250 260 270 280 290 300 310 320 pF1KB9 MDDTEHPEDGIFIRQVTDAETKPK :::::::::::::::::::::::: CCDS31 MDDTEHPEDGIFIRQVTDAETKPKST 310 320 >>CCDS7635.1 BUB3 gene_id:9184|Hs108|chr10 (328 aa) initn: 2227 init1: 2227 opt: 2227 Z-score: 2151.4 bits: 406.4 E(32554): 1.6e-113 Smith-Waterman score: 2227; 100.0% identity (100.0% similar) in 324 aa overlap (1-324:1-324) 10 20 30 40 50 60 pF1KB9 MTGSNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MTGSNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 DCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 DCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 KLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 KLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 QTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 QTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 SFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 SFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMYE 250 260 270 280 290 300 310 320 pF1KB9 MDDTEHPEDGIFIRQVTDAETKPK :::::::::::::::::::::::: CCDS76 MDDTEHPEDGIFIRQVTDAETKPKSPCT 310 320 >>CCDS13458.1 RAE1 gene_id:8480|Hs108|chr20 (368 aa) initn: 594 init1: 211 opt: 663 Z-score: 650.4 bits: 128.8 E(32554): 6.6e-30 Smith-Waterman score: 674; 35.3% identity (68.5% similar) in 337 aa overlap (6-324:31-365) 10 20 30 pF1KB9 MTGSNEFKLNQPPEDGISSVKFSPNT--SQFLLVS ...... :.:.:. ..::: : ..::... CCDS13 MSLFGTTSGFGTSGTSMFGSATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG 10 20 30 40 50 60 40 50 60 70 80 pF1KB9 SWDTSVRLYDVPANSMRL-KYQ--HTGAVLD-CAFYDPTHAWSGGLDHQLKMHDLNTDQE :: ..:: ..: ... . : : ::: ::: : : ....... :. :: ::...: CCDS13 SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA 70 80 90 100 110 120 90 100 110 120 130 140 pF1KB9 NLVGTHDAPIRCVEY--CPEVNVMVTGSWDQTVKLWDPRTPCNAGTFSQPEKVYTLSVSG .. ::::.. ... :. . ..:::::.:.:.:: :. ... ::. : .: CCDS13 IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY 130 140 150 160 170 180 150 160 170 180 190 200 pF1KB9 DRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQ----GYVLSSIEGRV .:.:: : ..:..:.:. .: :: ::.: ::. : .:: :..:.:::::: CCDS13 PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV 190 200 210 220 230 240 210 220 230 240 250 260 pF1KB9 AVEYLDPSPEVQKKKYAFKCHRLKENNI---EQIYPVNAISFHNIHNTFATGGSDGFVNI :..:..: :. : ...::::: . .: ..:: ::.:.:: .:.:.:: :::: .. CCDS13 AIHYINP-PNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSF 250 260 270 280 290 270 280 290 300 310 pF1KB9 WDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMY-EMDDTEHPE--DGIFIRQVT :: . .: .. :.. :...:. .: :::: . . . .:. . ::.:... CCDS13 WDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAA 300 310 320 330 340 350 320 pF1KB9 DAETKPK . : ::. CCDS13 E-ELKPRNKK 360 324 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 17:01:52 2016 done: Fri Nov 4 17:01:53 2016 Total Scan time: 2.360 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]