Result of FASTA (ccds) for pFN21AB8831
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8831, 445 aa
  1>>>pF1KB8831 445 - 445 aa - 445 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0198+/-0.000997; mu= 13.9016+/- 0.059
 mean_var=117.5911+/-35.116, 0's: 0 Z-trim(105.5): 271  B-trim: 1033 in 2/48
 Lambda= 0.118273
 statistics sampled from 8036 (8486) to 8036 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.611), E-opt: 0.2 (0.261), width:  16
 Scan time:  2.900

The best scores are:                                      opt bits E(32554)
CCDS3804.1 NPY5R gene_id:4889|Hs108|chr4           ( 445) 2967 518.0 7.5e-147
CCDS34089.1 NPY1R gene_id:4886|Hs108|chr4          ( 384)  481 93.7 3.4e-19
CCDS73100.1 NPY4R gene_id:5540|Hs108|chr10         ( 375)  448 88.1 1.6e-17
CCDS81459.1 1 gene_id:100996758|Hs108|chr10        ( 375)  448 88.1 1.6e-17
CCDS3791.1 NPY2R gene_id:4887|Hs108|chr4           ( 381)  426 84.4 2.2e-16
CCDS7761.1 CCKBR gene_id:887|Hs108|chr11           ( 447)  398 79.6 6.8e-15
CCDS4956.1 HCRTR2 gene_id:3062|Hs108|chr6          ( 444)  395 79.1 9.7e-15
CCDS8297.1 GPR83 gene_id:10888|Hs108|chr11         ( 423)  384 77.2 3.4e-14
CCDS53539.1 NPFFR1 gene_id:64106|Hs108|chr10       ( 430)  379 76.4 6.3e-14
CCDS3552.1 NPFFR2 gene_id:10886|Hs108|chr4         ( 420)  371 75.0 1.6e-13
CCDS47072.1 NPFFR2 gene_id:10886|Hs108|chr4        ( 423)  371 75.0 1.6e-13
CCDS3551.1 NPFFR2 gene_id:10886|Hs108|chr4         ( 522)  371 75.1 1.9e-13
CCDS3438.1 CCKAR gene_id:886|Hs108|chr4            ( 428)  368 74.5 2.3e-13
CCDS344.1 HCRTR1 gene_id:3061|Hs108|chr1           ( 425)  366 74.2 2.9e-13
CCDS13089.1 PROKR2 gene_id:128674|Hs108|chr20      ( 384)  344 70.4 3.7e-12
CCDS1889.1 PROKR1 gene_id:10887|Hs108|chr2         ( 393)  342 70.0 4.7e-12
CCDS3719.1 QRFPR gene_id:84109|Hs108|chr4          ( 431)  339 69.6 7.2e-12
CCDS14174.1 GRPR gene_id:2925|Hs108|chrX           ( 384)  330 68.0 1.9e-11
CCDS12012.1 GALR1 gene_id:2587|Hs108|chr18         ( 349)  321 66.4 5.2e-11


>>CCDS3804.1 NPY5R gene_id:4889|Hs108|chr4                (445 aa)
 initn: 2967 init1: 2967 opt: 2967  Z-score: 2749.9  bits: 518.0 E(32554): 7.5e-147
Smith-Waterman score: 2967; 100.0% identity (100.0% similar) in 445 aa overlap (1-445:1-445)

               10        20        30        40        50        60
pF1KB8 MDLELDEYYNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFMGNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS38 MDLELDEYYNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFMGNL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 LILMALMKKRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS38 LILMALMKKRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QCVSVLVSTLILISIAIVRYHMIKHPISNNLTANHGYFLIATVWTLGFAICSPLPVFHSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS38 QCVSVLVSTLILISIAIVRYHMIKHPISNNLTANHGYFLIATVWTLGFAICSPLPVFHSL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 VELQETFGSALLSSRYLCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSHTSVCRSISC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS38 VELQETFGSALLSSRYLCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSHTSVCRSISC
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 GLSNKENRLEENEMINLTLHPSKKSGPQVKLSGSHKWSYSFIKKHRRRYSKKTACVLPAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS38 GLSNKENRLEENEMINLTLHPSKKSGPQVKLSGSHKWSYSFIKKHRRRYSKKTACVLPAP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 ERPSQENHSRILPENFGSVRSQLSSSSKFIPGVPTCFEIKPEENSDVHELRVKRSVTRIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS38 ERPSQENHSRILPENFGSVRSQLSSSSKFIPGVPTCFEIKPEENSDVHELRVKRSVTRIK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 KRSRSVFYRLTILILVFAVSWMPLHLFHVVTDFNDNLISNRHFKLVYCICHLLGMMSCCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS38 KRSRSVFYRLTILILVFAVSWMPLHLFHVVTDFNDNLISNRHFKLVYCICHLLGMMSCCL
              370       380       390       400       410       420

              430       440     
pF1KB8 NPILYGFLNNGIKADLVSLIHCLHM
       :::::::::::::::::::::::::
CCDS38 NPILYGFLNNGIKADLVSLIHCLHM
              430       440     

>>CCDS34089.1 NPY1R gene_id:4886|Hs108|chr4               (384 aa)
 initn: 653 init1: 369 opt: 481  Z-score: 458.2  bits: 93.7 E(32554): 3.4e-19
Smith-Waterman score: 504; 28.1% identity (54.8% similar) in 398 aa overlap (43-436:41-331)

             20        30        40         50        60        70 
pF1KB8 LATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGL-YTFVSLLGFMGNLLILMALMKKRN
                                     : ..: :  : .::  ::: ... ..:...
CCDS34 NHSVHSNFSEKNAQLLAFENDDCHLPLAMIFTLALAYGAVIILGVSGNLALIIIILKQKE
               20        30        40        50        60        70

              80        90       100       110       120       130 
pF1KB8 QKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFLQCVSVLVSTLI
       .....:.:: ::.:::.::...: :::.. .:.:.:.::..::.. ::.::::. :: . 
CCDS34 MRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIFS
               80        90       100       110       120       130

             140       150       160       170       180       190 
pF1KB8 LISIAIVRYHMIKHPISNNLTANHGYFLIATVWTLGFAICSPLPVFHSLVELQETFGSAL
       :. ::. :...: .: .   .  :.:  ::..:.:  :. : :: .   :  .: : .. 
CCDS34 LVLIAVERHQLIINPRGWRPNNRHAYVGIAVIWVL--AVASSLPFLIYQVMTDEPFQNVT
              140       150       160         170       180        

                200       210       220       230       240        
pF1KB8 LSS---RYLCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSHTSVCRSISCGLSNKENR
       :..   .:.: ...::::.:...:  ::..::. :: :.      .:             
CCDS34 LDAYKDKYVCFDQFPSDSHRLSYTTLLLVLQYFGPL-CFIF----ICY------------
      190       200       210       220            230             

      250       260       270       280       290       300        
pF1KB8 LEENEMINLTLHPSKKSGPQVKLSGSHKWSYSFIKKHRRRYSKKTACVLPAPERPSQENH
                            :.         .:. .::                     
CCDS34 --------------------FKI---------YIRLKRR---------------------
                                          240                      

      310       320       330       340       350       360        
pF1KB8 SRILPENFGSVRSQLSSSSKFIPGVPTCFEIKPEENSDVHELRVKRSVTRIKKRSRSVFY
                                          :. . ..: ..  .   ::   .  
CCDS34 -----------------------------------NNMMDKMRDNKYRSSETKR---INI
                                                250       260      

      370       380       390       400       410       420        
pF1KB8 RLTILILVFAVSWMPLHLFHVVTDFNDNLISNRHFKLVYCICHLLGMMSCCLNPILYGFL
        :  ....::: :.:: .:..: :.: ..:.. . .:.. .::: .:.: :.:::.::::
CCDS34 MLLSIVVAFAVCWLPLTIFNTVFDWNHQIIATCNHNLLFLLCHLTAMISTCVNPIFYGFL
           270       280       290       300       310       320   

      430       440                                                
pF1KB8 NNGIKADLVSLIHCLHM                                           
       :.... ::                                                    
CCDS34 NKNFQRDLQFFFNFCDFRSRDDDYETIAMSTMHTDVSKTSLKQASPVAFKKINNNDDNEK
           330       340       350       360       370       380   

>>CCDS73100.1 NPY4R gene_id:5540|Hs108|chr10              (375 aa)
 initn: 629 init1: 326 opt: 448  Z-score: 427.9  bits: 88.1 E(32554): 1.6e-17
Smith-Waterman score: 484; 25.1% identity (55.4% similar) in 406 aa overlap (39-440:39-337)

       10        20        30        40        50        60        
pF1KB8 YNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFMGNLLILMALMK
                                     :.. :..  :.. ...: .::: .. . ..
CCDS73 LLLPKSPQGENRSKPLGTPYNFSEHCQDSVDVMVFIVTSYSIETVVGVLGNLCLMCVTVR
       10        20        30        40        50        60        

       70        80        90       100       110       120        
pF1KB8 KRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFLQCVSVLVS
       .... ...:.::.::::::.:. :.:.:.: . ...: :.::...:..  :.::.:: ::
CCDS73 QKEKANVTNLLIANLAFSDFLMCLLCQPLTAVYTIMDYWIFGETLCKMSAFIQCMSVTVS
       70        80        90       100       110       120        

      130       140       150       160       170       180        
pF1KB8 TLILISIAIVRYHMIKHPISNNLTANHGYFLIATVWTLGFAICSPLPVFHSLVE--LQET
        : :. .:. :...: .: . . . ...:. :. .:... ..  :. . .:..:  ....
CCDS73 ILSLVLVALERHQLIINPTGWKPSISQAYLGIVLIWVIACVLSLPF-LANSILENVFHKN
      130       140       150       160       170        180       

        190         200       210       220       230       240    
pF1KB8 FGSAL--LSSRYLCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSHTSVCRSISCGLSN
        ..::  :... .:.::::   .:  .:  ::: :: :::  . : .. . : ..     
CCDS73 HSKALEFLADKVVCTESWPLAHHRTIYTTFLLLFQYCLPLGFILVCYARIYRCLQ-----
       190       200       210       220       230       240       

          250       260       270       280       290       300    
pF1KB8 KENRLEENEMINLTLHPSKKSGPQVKLSGSHKWSYSFIKKHRRRYSKKTACVLPAPERPS
       ...:.                         :: .::.    :  . :..  ::       
CCDS73 RQGRVF------------------------HKGTYSL----RAGHMKQVNVVL-------
                                    250           260              

          310       320       330       340       350       360    
pF1KB8 QENHSRILPENFGSVRSQLSSSSKFIPGVPTCFEIKPEENSDVHELRVKRSVTRIKKRSR
                                                                   
CCDS73 ------------------------------------------------------------
                                                                   

          370       380       390       400       410       420    
pF1KB8 SVFYRLTILILVFAVSWMPLHLFHVVTDFNDNLISNRHFKLVYCICHLLGMMSCCLNPIL
             ......::: :.:::.:. . :.. . :   : .:.. .::::.: : :.::..
CCDS73 ------VVMVVAFAVLWLPLHVFNSLEDWHHEAIPICHGNLIFLVCHLLAMASTCVNPFI
             270       280       290       300       310       320 

          430       440                                      
pF1KB8 YGFLNNGIKADLVSLIHCLHM                                 
       :::::...: .. .:.                                      
CCDS73 YGFLNTNFKKEIKALVLTCQQSAPLEESEHLPLSTVHTEVSKGSLRLSGRSNPI
             330       340       350       360       370     

>>CCDS81459.1 1 gene_id:100996758|Hs108|chr10             (375 aa)
 initn: 629 init1: 326 opt: 448  Z-score: 427.9  bits: 88.1 E(32554): 1.6e-17
Smith-Waterman score: 484; 25.1% identity (55.4% similar) in 406 aa overlap (39-440:39-337)

       10        20        30        40        50        60        
pF1KB8 YNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFMGNLLILMALMK
                                     :.. :..  :.. ...: .::: .. . ..
CCDS81 LLLPKSPQGENRSKPLGTPYNFSEHCQDSVDVMVFIVTSYSIETVVGVLGNLCLMCVTVR
       10        20        30        40        50        60        

       70        80        90       100       110       120        
pF1KB8 KRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFLQCVSVLVS
       .... ...:.::.::::::.:. :.:.:.: . ...: :.::...:..  :.::.:: ::
CCDS81 QKEKANVTNLLIANLAFSDFLMCLLCQPLTAVYTIMDYWIFGETLCKMSAFIQCMSVTVS
       70        80        90       100       110       120        

      130       140       150       160       170       180        
pF1KB8 TLILISIAIVRYHMIKHPISNNLTANHGYFLIATVWTLGFAICSPLPVFHSLVE--LQET
        : :. .:. :...: .: . . . ...:. :. .:... ..  :. . .:..:  ....
CCDS81 ILSLVLVALERHQLIINPTGWKPSISQAYLGIVLIWVIACVLSLPF-LANSILENVFHKN
      130       140       150       160       170        180       

        190         200       210       220       230       240    
pF1KB8 FGSAL--LSSRYLCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSHTSVCRSISCGLSN
        ..::  :... .:.::::   .:  .:  ::: :: :::  . : .. . : ..     
CCDS81 HSKALEFLADKVVCTESWPLAHHRTIYTTFLLLFQYCLPLGFILVCYARIYRRLQ-----
       190       200       210       220       230       240       

          250       260       270       280       290       300    
pF1KB8 KENRLEENEMINLTLHPSKKSGPQVKLSGSHKWSYSFIKKHRRRYSKKTACVLPAPERPS
       ...:.                         :: .::.    :  . :..  ::       
CCDS81 RQGRVF------------------------HKGTYSL----RAGHMKQVNVVL-------
                                    250           260              

          310       320       330       340       350       360    
pF1KB8 QENHSRILPENFGSVRSQLSSSSKFIPGVPTCFEIKPEENSDVHELRVKRSVTRIKKRSR
                                                                   
CCDS81 ------------------------------------------------------------
                                                                   

          370       380       390       400       410       420    
pF1KB8 SVFYRLTILILVFAVSWMPLHLFHVVTDFNDNLISNRHFKLVYCICHLLGMMSCCLNPIL
             ......::: :.:::.:. . :.. . :   : .:.. .::::.: : :.::..
CCDS81 ------VVMVVAFAVLWLPLHVFNSLEDWHHEAIPICHGNLIFLVCHLLAMASTCVNPFI
             270       280       290       300       310       320 

          430       440                                      
pF1KB8 YGFLNNGIKADLVSLIHCLHM                                 
       :::::...: .. .:.                                      
CCDS81 YGFLNTNFKKEIKALVLTCQQSAPLEESEHLPLSTVHTEVSKGSLRLSGRSNPI
             330       340       350       360       370     

>>CCDS3791.1 NPY2R gene_id:4887|Hs108|chr4                (381 aa)
 initn: 576 init1: 343 opt: 426  Z-score: 407.5  bits: 84.4 E(32554): 2.2e-16
Smith-Waterman score: 446; 25.4% identity (53.1% similar) in 409 aa overlap (39-442:48-342)

       10        20        30        40        50        60        
pF1KB8 YNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFMGNLLILMALMK
                                     ..:  ::  :  . ::: .:: :.. ...:
CCDS37 KVEQYGPQTTPRGELVPDPEPELIDSTKLIEVQVVLILAYCSIILLGVIGNSLVIHVVIK
        20        30        40        50        60        70       

       70        80        90       100       110       120        
pF1KB8 KRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFLQCVSVLVS
        ....:..::.:.::: .:.::  .: ::::: .:. .: .: :.::..:. : ..: ::
CCDS37 FKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVS
        80        90       100       110       120       130       

      130       140       150       160       170         180      
pF1KB8 TLILISIAIVRYHMIKHPISNNLTANHGYFLIATVWTLGFAICSPLPVF--HSLVELQET
       :. :  ::. :.. : . . ....   ....:. .: ..  . ::: .:  .::.:.   
CCDS37 TITLTVIALDRHRCIVYHLESKISKRISFLIIGLAWGISALLASPLAIFREYSLIEIIPD
       140       150       160       170       180       190       

        190       200          210       220       230       240   
pF1KB8 FGSALLSSRYLCVESWPSDS---YRIAFTISLLLVQYILPLVCLTVSHTSVCRSISCGLS
       :   ...    :.:.::..    :  ....: ::. :.:::  .. :.: .         
CCDS37 F--EIVA----CTEKWPGEEKSIYGTVYSLSSLLILYVLPLGIISFSYTRI---------
         200           210       220       230       240           

           250       260       270       280       290       300   
pF1KB8 NKENRLEENEMINLTLHPSKKSGPQVKLSGSHKWSYSFIKKHRRRYSKKTACVLPAPERP
                                        ::                         
CCDS37 ---------------------------------WS-------------------------
                                                                   

           310       320       330       340       350       360   
pF1KB8 SQENHSRILPENFGSVRSQLSSSSKFIPGVPTCFEIKPEENSDVHELRVKRSVTRIKKRS
       . .::                      ::.          :.  :. : :  .:..    
CCDS37 KLKNHVS--------------------PGAA---------NDHYHQRRQK--TTKM----
          250                                    260               

           370       380       390       400       410       420   
pF1KB8 RSVFYRLTILILVFAVSWMPLHLFHVVTDFNDNLISNRHFKLVYCICHLLGMMSCCLNPI
             :. ...::::::.::: :....:....... ...::.. . :...: :   ::.
CCDS37 ------LVCVVVVFAVSWLPLHAFQLAVDIDSQVLDLKEYKLIFTVFHIIAMCSTFANPL
           270       280       290       300       310       320   

           430       440                                         
pF1KB8 LYGFLNNGIKADLVSLIHCLHM                                    
       :::..:.. .  ..: ..:                                       
CCDS37 LYGWMNSNYRKAFLSAFRCEQRLDAIHSEVSVTFKAKKNLEVRKNSGPNDSFTEATNV
           330       340       350       360       370       380 

>>CCDS7761.1 CCKBR gene_id:887|Hs108|chr11                (447 aa)
 initn: 430 init1: 252 opt: 398  Z-score: 380.8  bits: 79.6 E(32554): 6.8e-15
Smith-Waterman score: 407; 25.6% identity (55.6% similar) in 410 aa overlap (45-442:58-408)

           20        30        40        50        60        70    
pF1KB8 TENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFMGNLLILMALMKKRNQKT
                                     : ::. . :..  ::.::...:  .:  .:
CCDS77 LLNSSSVGNLSCEPPRIRGAGTRELELAIRITLYAVIFLMSVGGNMLIIVVLGLSRRLRT
        30        40        50        60        70        80       

           80        90       100       110       120       130    
pF1KB8 TVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFLQCVSVLVSTLILIS
       ..: .. .:: ::.:... : ::::   :.  ..:: :.:. . .:. ::: :::: :..
CCDS77 VTNAFLLSLAVSDLLLAVACMPFTLLPNLMGTFIFGTVICKAVSYLMGVSVSVSTLSLVA
        90       100       110       120       130       140       

          140       150         160       170       180       190  
pF1KB8 IAIVRYHMIKHPISNNL--TANHGYFLIATVWTLGFAICSPLPVFHSLVELQETFGSALL
       ::. ::  : .:..  .  : .:.  .:...: :.  .  : ::. ..:.     :  .:
CCDS77 IALERYSAICRPLQARVWQTRSHAARVIVATWLLSGLLMVPYPVY-TVVQ---PVGPRVL
       150       160       170       180       190           200   

            200       210       220       230       240            
pF1KB8 SSRYLCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSHTSVCRSISCGL-------SNK
       .    ::. :::   : .... :::. ...: : ..:..  . : .  ::       :..
CCDS77 Q----CVHRWPSARVRQTWSVLLLLLLFFIPGVVMAVAYGLISRELYLGLRFDGDSDSDS
               210       220       230       240       250         

         250       260       270       280       290       300     
pF1KB8 ENRLEENEMINLTLHPSKKSGPQVKLSGSHKWSYSFIKKHRRRYSKKTACVLPAPE-RPS
       ..:....  .  ..: . .  :..   :  .                 .: .  :. ::.
CCDS77 QSRVRNQGGLPGAVHQNGRCRPETGAVGEDS----------------DGCYVQLPRSRPA
     260       270       280       290                       300   

          310       320       330       340       350       360    
pF1KB8 QENHSRILPENFGSVRSQLSSSSKFIPGVPTCFEIKPEENSDVHELRVKRSVTRIKKRSR
        :                :.. .   ::  .    .: .     .: .:. :.:.     
CCDS77 LE----------------LTALTAPGPGSGS----RPTQA----KLLAKKRVVRM-----
                           310           320           330         

          370       380       390       400        410       420   
pF1KB8 SVFYRLTILILVFAVSWMPLHLFHVVTDFNDNLISNRHFKLV-YCICHLLGMMSCCLNPI
            : .....: . :.:..  ..   : :.  ..: .. .   . :::.. : :.::.
CCDS77 -----LLVIVVLFFLCWLPVYSANTWRAF-DGPGAHRALSGAPISFIHLLSYASACVNPL
               340       350        360       370       380        

           430        440                                         
pF1KB8 LYGFLNNGIK-ADLVSLIHCLHM                                    
       .: :..  .. : : .  .:                                       
CCDS77 VYCFMHRRFRQACLETCARCCPRPPRARPRALPDEDPPTPSIASLSRLSYTTISTLGPG
      390       400       410       420       430       440       

>>CCDS4956.1 HCRTR2 gene_id:3062|Hs108|chr6               (444 aa)
 initn: 347 init1: 312 opt: 395  Z-score: 378.1  bits: 79.1 E(32554): 9.7e-15
Smith-Waterman score: 395; 28.7% identity (62.1% similar) in 272 aa overlap (29-297:43-306)

                 10        20        30        40        50        
pF1KB8   MDLELDEYYNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFMG
                                     .: .:     . .. ::. : .: .....:
CCDS49 RNWSSASELNETQEPFLNPTDYDDEEFLRYLWREYLHP-KEYEWVLIAGYIIVFVVALIG
             20        30        40        50         60        70 

       60        70        80        90       100       110        
pF1KB8 NLLILMALMKKRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMP
       :.:. .:. :.....:..:..: ::...:.::.. : : ::.  . . :.::. .:...:
CCDS49 NVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDITETWFFGQSLCKVIP
              80        90       100       110       120       130 

      120       130       140       150       160       170        
pF1KB8 FLQCVSVLVSTLILISIAIVRYHMIKHPISNNLTANHGYFLIATVWTLGFAICSPLPVFH
       .:: ::: ::.: :  ::. :.. : ::.  . ::...   :. .: ..  :  :  .  
CCDS49 YLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVIIWIVSCIIMIPQAI--
             140       150       160       170       180           

      180        190        200       210       220       230      
pF1KB8 SLVELQETF-GSALLSSRY-LCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSHTSVCR
        ..: . .: : :  .. . .: : : .. :   . : ..:: :. ::  ..... .. :
CCDS49 -VMECSTVFPGLANKTTLFTVCDERWGGEIYPKMYHICFFLVTYMAPLCLMVLAYLQIFR
      190       200       210       220       230       240        

        240       250       260        270       280       290     
pF1KB8 SISCGLSNKENRLEENEMINLTLHP-SKKSGPQVKLSGSHKWSYSFIKKHRRRYSKKTAC
       .. :      . . . .     :.: :.  ::    ..  .   . ::. : :  .::: 
CCDS49 KLWCRQIPGTSSVVQRKW--KPLQPVSQPRGPGQPTKSRMSAVAAEIKQIRAR--RKTAR
      250       260         270       280       290         300    

         300       310       320       330       340       350     
pF1KB8 VLPAPERPSQENHSRILPENFGSVRSQLSSSSKFIPGVPTCFEIKPEENSDVHELRVKRS
       .:                                                          
CCDS49 MLMIVLLVFAICYLPISILNVLKRVFGMFAHTEDRETVYAWFTFSHWLVYANSAANPIIY
          310       320       330       340       350       360    

>>CCDS8297.1 GPR83 gene_id:10888|Hs108|chr11              (423 aa)
 initn: 357 init1: 319 opt: 384  Z-score: 368.2  bits: 77.2 E(32554): 3.4e-14
Smith-Waterman score: 384; 29.1% identity (65.7% similar) in 230 aa overlap (24-242:46-271)

                      10        20        30                40     
pF1KB8        MDLELDEYYNKTLATENNTAATRNSDFPVWDDY--------KSSVDDLQYFLI
                                     :  :  :...        .:.   .. .::
CCDS82 ATEPHEGRADEQSAEAALAVPNASHFFSWNNYTFSDWQNFVGRRRYGAESQNPTVKALLI
          20        30        40        50        60        70     

          50        60        70        80        90       100     
pF1KB8 GLYTFVSLLGFMGNLLILMALMKKRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLD
         :.:. .....::.:.  ...:.. ........: ::: .::...:. .::::.  . .
CCDS82 VAYSFIIVFSLFGNVLVCHVIFKNQRMHSATSLFIVNLAVADIMITLLNTPFTLVRFVNS
          80        90       100       110       120       130     

         110       120       130       140       150       160     
pF1KB8 QWMFGKVMCHIMPFLQCVSVLVSTLILISIAIVRYHMIKHPISNNLTANHGYFLIATVWT
        :.::: :::.  : :  :. ::.: : .::. :...: ::..  .. ..: . ::..::
CCDS82 TWIFGKGMCHVSRFAQYCSLHVSALTLTAIAVDRHQVIMHPLKPRISITKGVIYIAVIWT
         140       150       160       170       180       190     

         170       180       190       200         210       220   
pF1KB8 LGFAICSPLPVFHSLVELQETFGSALLSSRYLCVESWP--SDSYRIAFTISLLLVQYILP
       .  :    ::  :.. .   ::  .    : ::. ..:  .: .   . .. ... ::::
CCDS82 M--ATFFSLP--HAICQKLFTFKYSEDIVRSLCLPDFPEPADLFWKYLDLATFILLYILP
           200         210       220       230       240       250 

           230        240       250       260       270       280  
pF1KB8 LVCLTVSHTSVCRSI-SCGLSNKENRLEENEMINLTLHPSKKSGPQVKLSGSHKWSYSFI
       :. ..:... : ...  :..                                        
CCDS82 LLIISVAYARVAKKLWLCNMIGDVTTEQYFALRRKKKKTIKMLMLVVVLFALCWFPLNCY
             260       270       280       290       300       310 

>>CCDS53539.1 NPFFR1 gene_id:64106|Hs108|chr10            (430 aa)
 initn: 454 init1: 286 opt: 379  Z-score: 363.5  bits: 76.4 E(32554): 6.3e-14
Smith-Waterman score: 379; 30.1% identity (65.9% similar) in 229 aa overlap (18-240:21-244)

                  10        20        30        40        50       
pF1KB8    MDLELDEYYNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFM
                           :: ::  ...   . :. .     .:... :... :: ..
CCDS53 MEGEPSQPPNSSWPLSQNGTNTEATPATNLTFSSYYQHTSPVAAMFIVA-YALIFLLCMV
               10        20        30        40         50         

        60        70        80        90       100       110       
pF1KB8 GNLLILMALMKKRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIM
       :: :. . ..:.:...:..:..: ::: ::.:: .:: : ::.. :.  : : .. :.. 
CCDS53 GNTLVCFIVLKNRHMHTVTNMFILNLAVSDLLVGIFCMPTTLVDNLITGWPFDNATCKMS
      60        70        80        90       100       110         

       120       130       140       150       160       170       
pF1KB8 PFLQCVSVLVSTLILISIAIVRYHMIKHPISNNLTANHGYFLIATVWTLGFAICSPLPVF
        ..: .:: .:.. :..::. :.. : ::. ..::  ..   ::..:.:.. :  :  : 
CCDS53 GLVQGMSVSASVFTLVAIAVERFRCIVHPFREKLTLRKALVTIAVIWALALLIMCPSAVT
     120       130       140       150       160       170         

       180       190             200       210       220       230 
pF1KB8 HSLVELQETFGSALLSSR------YLCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSH
        .... .. :   ....:      : : :.::  ..: ..:  :.   :. ::. ..: .
CCDS53 LTVTREEHHF---MVDARNRSYPLYSCWEAWPEKGMRRVYTTVLFSHIYLAPLALIVVMY
     180          190       200       210       220       230      

             240       250       260       270       280       290 
pF1KB8 TSVCRSISCGLSNKENRLEENEMINLTLHPSKKSGPQVKLSGSHKWSYSFIKKHRRRYSK
       . . :.. :                                                   
CCDS53 ARIARKL-CQAPGPAPGGEEAADPRASRRRARVVHMLVMVALFFTLSWLPLWALLLLIDY
        240        250       260       270       280       290     

>>CCDS3552.1 NPFFR2 gene_id:10886|Hs108|chr4              (420 aa)
 initn: 442 init1: 310 opt: 371  Z-score: 356.3  bits: 75.0 E(32554): 1.6e-13
Smith-Waterman score: 371; 31.3% identity (68.2% similar) in 198 aa overlap (43-234:48-242)

             20        30        40        50        60        70  
pF1KB8 LATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFMGNLLILMALMKKRNQ
                                     :.:. : .. .: .::: .. . .:.....
CCDS35 NVNDTKHHLYSDINITYVNYYLHQPQVAAIFIIS-YFLIFFLCMMGNTVVCFIVMRNKHM
        20        30        40        50         60        70      

             80        90       100       110       120       130  
pF1KB8 KTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFLQCVSVLVSTLIL
       .:..:..: :::.::.:: .:: :.:: . ..  : ::..::.:  ..: .:: .:.. :
CCDS35 HTVTNLFILNLAISDLLVGIFCMPITLLDNIIAGWPFGNTMCKISGLVQGISVAASVFTL
         80        90       100       110       120       130      

            140       150       160       170       180       190  
pF1KB8 ISIAIVRYHMIKHPISNNLTANHGYFLIATVWTLGFAICSPLPVFHSLVELQETFGSALL
       ..::. :.. . .:.. .:: . .. .:  .:.:...: ::  :.  . :  : .  . :
CCDS35 VAIAVDRFQCVVYPFKPKLTIKTAFVIIMIIWVLAITIMSPSAVMLHVQE--EKYYRVRL
        140       150       160       170       180         190    

                  200       210       220       230       240      
pF1KB8 SSR------YLCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSHTSVCRSISCGLSNKE
       .:.      : : :.::.. .:  .:  :.   :. ::  ... .  .            
CCDS35 NSQNKTSPVYWCREDWPNQEMRKIYTTVLFANIYLAPLSLIVIMYGRIGISLFRAAVPHT
          200       210       220       230       240       250    

        250       260       270       280       290       300      
pF1KB8 NRLEENEMINLTLHPSKKSGPQVKLSGSHKWSYSFIKKHRRRYSKKTACVLPAPERPSQE
                                                                   
CCDS35 GRKNQEQWHVVSRKKQKIIKMLLIVALLFILSWLPLWTLMMLSDYADLSPNELQIINIYI
          260       270       280       290       300       310    




445 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 15:55:46 2016 done: Fri Nov  4 15:55:46 2016
 Total Scan time:  2.900 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com