Result of FASTA (omim) for
pFN21AB8825
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8825, 415 aa
1>>>pF1KB8825 415 - 415 aa - 415 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0364+/-0.000346; mu= 19.3092+/- 0.022
mean_var=89.2046+/-20.183, 0's: 0 Z-trim(116.3): 570 B-trim: 2822 in 2/49
Lambda= 0.135794
statistics sampled from 26632 (27338) to 26632 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.321), width: 16
Scan time: 9.490
The best scores are: opt bits E(85289)
NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415) 2769 552.6 6.5e-157
XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415) 2769 552.6 6.5e-157
XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378) 2465 493.0 5.2e-139
NP_001495 (OMIM: 300574) C-X-C chemokine receptor ( 368) 2435 487.1 3e-137
XP_005262314 (OMIM: 300574) PREDICTED: C-X-C chemo ( 278) 1409 286.0 8e-77
XP_016884925 (OMIM: 300574) PREDICTED: C-X-C chemo ( 268) 1379 280.1 4.6e-75
NP_001707 (OMIM: 601613) C-X-C chemokine receptor ( 372) 845 175.6 1.8e-43
NP_116743 (OMIM: 601613) C-X-C chemokine receptor ( 327) 835 173.6 6.3e-43
NP_001548 (OMIM: 146928) C-X-C chemokine receptor ( 360) 827 172.1 2e-42
XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 827 172.1 2e-42
XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 827 172.1 2e-42
NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360) 827 172.1 2e-42
XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 827 172.1 2e-42
XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 827 172.1 2e-42
NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350) 791 165.0 2.6e-40
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372) 786 164.1 5.4e-40
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372) 786 164.1 5.4e-40
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372) 786 164.1 5.4e-40
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378) 786 164.1 5.4e-40
NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356) 758 158.6 2.3e-38
NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352) 754 157.8 4e-38
NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374) 750 157.0 7.1e-38
NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374) 750 157.0 7.1e-38
NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315) 747 156.4 9.5e-38
NP_057686 (OMIM: 600240) C-C chemokine receptor ty ( 362) 735 154.1 5.4e-37
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 734 153.9 6.1e-37
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 734 153.9 6.1e-37
NP_001287 (OMIM: 602648) atypical chemokine recept ( 384) 731 153.3 9.6e-37
NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374) 694 146.1 1.4e-34
XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360) 685 144.3 4.7e-34
NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360) 685 144.3 4.7e-34
NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352) 683 143.9 6.1e-34
NP_000570 (OMIM: 601373,609532,610379,612522) C-C ( 352) 683 143.9 6.1e-34
NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357) 677 142.7 1.4e-33
NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357) 677 142.7 1.4e-33
NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369) 677 142.7 1.4e-33
XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369) 677 142.7 1.4e-33
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 670 141.3 3.6e-33
NP_848540 (OMIM: 606065) atypical chemokine recept ( 350) 655 138.4 2.7e-32
NP_057641 (OMIM: 606065) atypical chemokine recept ( 350) 655 138.4 2.7e-32
XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 643 136.0 1.4e-31
NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355) 643 136.0 1.4e-31
XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 643 136.0 1.4e-31
NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355) 643 136.0 1.4e-31
NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373) 643 136.1 1.5e-31
NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376) 643 136.1 1.5e-31
XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 643 136.1 1.6e-31
XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 643 136.1 1.6e-31
XP_011531593 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342) 639 135.2 2.4e-31
XP_005264866 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342) 639 135.2 2.4e-31
>>NP_001136269 (OMIM: 300574) C-X-C chemokine receptor t (415 aa)
initn: 2769 init1: 2769 opt: 2769 Z-score: 2938.0 bits: 552.6 E(85289): 6.5e-157
Smith-Waterman score: 2769; 100.0% identity (100.0% similar) in 415 aa overlap (1-415:1-415)
10 20 30 40 50 60
pF1KB8 MELRKYGPGRLAGTVIGGAAQSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELRKYGPGRLAGTVIGGAAQSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 AEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 NFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 HDERLNATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HDERLNATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 MRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCL
310 320 330 340 350 360
370 380 390 400 410
pF1KB8 NPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
370 380 390 400 410
>>XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemokine (415 aa)
initn: 2769 init1: 2769 opt: 2769 Z-score: 2938.0 bits: 552.6 E(85289): 6.5e-157
Smith-Waterman score: 2769; 100.0% identity (100.0% similar) in 415 aa overlap (1-415:1-415)
10 20 30 40 50 60
pF1KB8 MELRKYGPGRLAGTVIGGAAQSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLND
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MELRKYGPGRLAGTVIGGAAQSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 AEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 NFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB8 HDERLNATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDERLNATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB8 MRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCL
310 320 330 340 350 360
370 380 390 400 410
pF1KB8 NPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
370 380 390 400 410
>>XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemokine (378 aa)
initn: 2441 init1: 2441 opt: 2465 Z-score: 2616.7 bits: 493.0 E(85289): 5.2e-139
Smith-Waterman score: 2465; 97.4% identity (98.4% similar) in 380 aa overlap (36-415:1-378)
10 20 30 40 50 60
pF1KB8 YGPGRLAGTVIGGAAQSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLNDAEVAA
.::: .:.:: . ::::::::::::::
XP_005 MPGLAHSPGSP--QGWVSDHQVLNDAEVAA
10 20
70 80 90 100 110 120
pF1KB8 LLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVL
30 40 50 60 70 80
130 140 150 160 170 180
pF1KB8 LSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAG
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB8 ALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERL
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB8 NATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVV
210 220 230 240 250 260
310 320 330 340 350 360
pF1KB8 VVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLY
270 280 290 300 310 320
370 380 390 400 410
pF1KB8 AFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
330 340 350 360 370
>>NP_001495 (OMIM: 300574) C-X-C chemokine receptor type (368 aa)
initn: 2435 init1: 2435 opt: 2435 Z-score: 2585.1 bits: 487.1 E(85289): 3e-137
Smith-Waterman score: 2435; 99.7% identity (100.0% similar) in 365 aa overlap (51-415:4-368)
30 40 50 60 70 80
pF1KB8 QSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLNDAEVAALLENFSSSYDYGENE
.:::::::::::::::::::::::::::::
NP_001 MVLEVSDHQVLNDAEVAALLENFSSSYDYGENE
10 20 30
90 100 110 120 130 140
pF1KB8 SDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLL
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 HLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNI
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB8 VHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQVGRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQVGRT
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB8 ALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHL
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB8 VVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLL
280 290 300 310 320 330
390 400 410
pF1KB8 LRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
:::::::::::::::::::::::::::::::::::
NP_001 LRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
340 350 360
>>XP_005262314 (OMIM: 300574) PREDICTED: C-X-C chemokine (278 aa)
initn: 1405 init1: 1385 opt: 1409 Z-score: 1500.2 bits: 286.0 E(85289): 8e-77
Smith-Waterman score: 1409; 95.5% identity (97.3% similar) in 221 aa overlap (36-256:1-219)
10 20 30 40 50 60
pF1KB8 YGPGRLAGTVIGGAAQSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLNDAEVAA
.::: .:.:: . ::::::::::::::
XP_005 MPGLAHSPGSP--QGWVSDHQVLNDAEVAA
10 20
70 80 90 100 110 120
pF1KB8 LLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVL
30 40 50 60 70 80
130 140 150 160 170 180
pF1KB8 LSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAG
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB8 ALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERL
150 160 170 180 190 200
250 260 270 280 290 300
pF1KB8 NATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVV
:::::::::::
XP_005 NATHCQYNFPQGSSSGSGCGCCSCAWAAPTREGSRGSHRLPAGIHPGLRPQRPPTRACEA
210 220 230 240 250 260
>>XP_016884925 (OMIM: 300574) PREDICTED: C-X-C chemokine (268 aa)
initn: 1399 init1: 1379 opt: 1379 Z-score: 1468.7 bits: 280.1 E(85289): 4.6e-75
Smith-Waterman score: 1379; 99.5% identity (100.0% similar) in 206 aa overlap (51-256:4-209)
30 40 50 60 70 80
pF1KB8 QSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLNDAEVAALLENFSSSYDYGENE
.:::::::::::::::::::::::::::::
XP_016 MVLEVSDHQVLNDAEVAALLENFSSSYDYGENE
10 20 30
90 100 110 120 130 140
pF1KB8 SDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLL
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB8 HLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNI
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB8 VHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQVGRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQGSSS
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB8 ALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHL
XP_016 GSGCGCCSCAWAAPTREGSRGSHRLPAGIHPGLRPQRPPTRACEAGIRAPLSPTV
220 230 240 250 260
>>NP_001707 (OMIM: 601613) C-X-C chemokine receptor type (372 aa)
initn: 788 init1: 444 opt: 845 Z-score: 901.5 bits: 175.6 E(85289): 1.8e-43
Smith-Waterman score: 845; 40.9% identity (68.3% similar) in 357 aa overlap (67-411:14-367)
40 50 60 70 80 90
pF1KB8 PGLYTAPSSPFPPSQVSDHQVLNDAEVAALLENFSSSYDYGENESD-SCCTSPPCPQD--
::.. : .: .: : . ::
NP_001 MNYPLTLEMDLENLEDLFWELDRLDNYNDTSLVENHLCPATEG
10 20 30 40
100 110 120 130 140 150
pF1KB8 -FSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLLHLAVADTLLVLT
. .: .:.:. :::.::::..:: : ..: .: . :::.:::.:::::: :::.
NP_001 PLMASFKAVFVPVAYSLIFLLGVIGNVLVLVILERHRQTRSSTETFLFHLAVADLLLVFI
50 60 70 80 90 100
160 170 180 190 200 210
pF1KB8 LPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPP
::. .....: ::.:. :::.. :: ..::: ..::::::. :::: ::::.. ::.
NP_001 LPFAVAEGSVGWVLGTFLCKTVIALHKVNFYCSSLLLACIAVDRYLAIVHAVHAYRHRRL
110 120 130 140 150 160
220 230 240 250 260
pF1KB8 ARVTLTCLAVWGLCLLFALPDFIFLSA---HHDERLNATHCQYNFPQVGRT----ALRVL
. .:: ..: . .:.:::...: .. ::.. : .: .. . ..: . : :
NP_001 LSIHITCGTIWLVGFLLALPEILFAKVSQGHHNNSL--PRCTFSQENQAETHAWFTSRFL
170 180 190 200 210 220
270 280 290 300 310 320
pF1KB8 QLVAGFLLPLLVMAYCYAHILAVL-LVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLV
:::::::.:::..::. .. : ..: .: .:.:....:. : :::.:::.:...
NP_001 YHVAGFLLPMLVMGWCYVGVVHRLRQAQRRPQRQKAVRVAILVTSIFFLCWSPYHIVIFL
230 240 250 260 270 280
330 340 350 360 370 380
pF1KB8 DILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLG
: : : :. .: .. . :: .. :: ::::::.::.:.::::: . :: .::
NP_001 DTLARLKAVDNTCKLNGSLPVAITMCEFLGLAHCCLNPMLYTFAGVKFRSDLSRLLTKLG
290 300 310 320 330 340
390 400 410
pF1KB8 CPNQRGLQRQPSSSRRDSSWSETSEASYSGL
: . .: . : :: :: ::. .:.
NP_001 CTGPASLCQLFPSWRR-SSLSESENATSLTTF
350 360 370
>>NP_116743 (OMIM: 601613) C-X-C chemokine receptor type (327 aa)
initn: 788 init1: 444 opt: 835 Z-score: 891.6 bits: 173.6 E(85289): 6.3e-43
Smith-Waterman score: 835; 42.7% identity (71.2% similar) in 323 aa overlap (97-411:3-322)
70 80 90 100 110 120
pF1KB8 LENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLL
.: .:.:. :::.::::..:: : ..:
NP_116 MASFKAVFVPVAYSLIFLLGVIGNVLVLVILE
10 20 30
130 140 150 160 170 180
pF1KB8 SRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGA
.: . :::.:::.:::::: :::. ::. .....: ::.:. :::.. :: ..::: ..
NP_116 RHRQTRSSTETFLFHLAVADLLLVFILPFAVAEGSVGWVLGTFLCKTVIALHKVNFYCSS
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB8 LLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSA---HHDE
::::::. :::: ::::.. ::. . .:: ..: . .:.:::...: .. ::..
NP_116 LLLACIAVDRYLAIVHAVHAYRHRRLLSIHITCGTIWLVGFLLALPEILFAKVSQGHHNN
100 110 120 130 140 150
250 260 270 280 290
pF1KB8 RLNATHCQYNFPQVGRT----ALRVLQLVAGFLLPLLVMAYCYAHILAVL-LVSRGQRRL
: .: .. . ..: . : : :::::::.:::..::. .. : ..: .:
NP_116 SL--PRCTFSQENQAETHAWFTSRFLYHVAGFLLPMLVMGWCYVGVVHRLRQAQRRPQRQ
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB8 RAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHC
.:.:....:. : :::.:::.:...: : : :. .: .. . :: .. :: ::
NP_116 KAVRVAILVTSIFFLCWSPYHIVIFLDTLARLKAVDNTCKLNGSLPVAITMCEFLGLAHC
220 230 240 250 260 270
360 370 380 390 400 410
pF1KB8 CLNPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
::::.::.:.::::: . :: .::: . .: . : :: :: ::. .:.
NP_116 CLNPMLYTFAGVKFRSDLSRLLTKLGCTGPASLCQLFPSWRR-SSLSESENATSLTTF
280 290 300 310 320
>>NP_001548 (OMIM: 146928) C-X-C chemokine receptor type (360 aa)
initn: 829 init1: 388 opt: 827 Z-score: 882.7 bits: 172.1 E(85289): 2e-42
Smith-Waterman score: 827; 40.6% identity (68.5% similar) in 340 aa overlap (72-408:21-357)
50 60 70 80 90 100
pF1KB8 APSSPFPPSQVSDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRA
:.:.:. . . :: . ::....
NP_001 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPE-SLEINKY
10 20 30 40
110 120 130 140 150 160
pF1KB8 FLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAA
:. .:.:.:::.::::. : :.: :.. : ::..::.::.:: :..::::.::.. .
NP_001 FVVIIYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKV
50 60 70 80 90 100
170 180 190 200 210 220
pF1KB8 VQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLA
:.::. ::::.. : ..:::.: ::::::: :::: :::::. . : . ::.
NP_001 NGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQ-KRYLVKFICLS
110 120 130 140 150 160
230 240 250 260 270
pF1KB8 VWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQVG---RTALRVLQLVAGFLLPLLVM
.::: ::.::: ..: . .. .. . : .. . : ::.: ::..:::.:
NP_001 IWGLSLLLALPVLLFRRTVYSSNVSPA-CYEDMGNNTANWRMLLRILPQSFGFIVPLLIM
170 180 190 200 210 220
280 290 300 310 320 330
pF1KB8 AYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCG
.::. : .:. .. .. ::::.. .::. : ::: ::.::.:.: :: .. ..:
NP_001 LFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCE
230 240 250 260 270 280
340 350 360 370 380 390
pF1KB8 RESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSS
:....: : ..: :: .: :::::.:::.: :::. . .: : .. .: .. :
NP_001 RRNHIDRALDATEILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPS
290 300 310 320 330 340
400 410
pF1KB8 RRDSSWSETSEASYSGL
:: ..::
NP_001 FVGSSSGHTSTTL
350 360
>>XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemokine (360 aa)
initn: 829 init1: 388 opt: 827 Z-score: 882.7 bits: 172.1 E(85289): 2e-42
Smith-Waterman score: 827; 40.6% identity (68.5% similar) in 340 aa overlap (72-408:21-357)
50 60 70 80 90 100
pF1KB8 APSSPFPPSQVSDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRA
:.:.:. . . :: . ::....
XP_016 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPE-SLEINKY
10 20 30 40
110 120 130 140 150 160
pF1KB8 FLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAA
:. .:.:.:::.::::. : :.: :.. : ::..::.::.:: :..::::.::.. .
XP_016 FVVIIYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKV
50 60 70 80 90 100
170 180 190 200 210 220
pF1KB8 VQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLA
:.::. ::::.. : ..:::.: ::::::: :::: :::::. . : . ::.
XP_016 NGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQ-KRYLVKFICLS
110 120 130 140 150 160
230 240 250 260 270
pF1KB8 VWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQVG---RTALRVLQLVAGFLLPLLVM
.::: ::.::: ..: . .. .. . : .. . : ::.: ::..:::.:
XP_016 IWGLSLLLALPVLLFRRTVYSSNVSPA-CYEDMGNNTANWRMLLRILPQSFGFIVPLLIM
170 180 190 200 210 220
280 290 300 310 320 330
pF1KB8 AYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCG
.::. : .:. .. .. ::::.. .::. : ::: ::.::.:.: :: .. ..:
XP_016 LFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCE
230 240 250 260 270 280
340 350 360 370 380 390
pF1KB8 RESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSS
:....: : ..: :: .: :::::.:::.: :::. . .: : .. .: .. :
XP_016 RRNHIDRALDATEILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPS
290 300 310 320 330 340
400 410
pF1KB8 RRDSSWSETSEASYSGL
:: ..::
XP_016 FVGSSSGHTSTTL
350 360
415 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 15:53:55 2016 done: Fri Nov 4 15:53:56 2016
Total Scan time: 9.490 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]