Result of FASTA (omim) for
pFN21AB8367
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8367, 298 aa
1>>>pF1KB8367 298 - 298 aa - 298 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4165+/-0.000582; mu= -0.4228+/- 0.036
mean_var=269.2979+/-55.414, 0's: 0 Z-trim(113.2): 232 B-trim: 33 in 1/59
Lambda= 0.078155
statistics sampled from 22125 (22380) to 22125 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.628), E-opt: 0.2 (0.262), width: 16
Scan time: 5.410
The best scores are: opt bits E(85289)
NP_067042 (OMIM: 606870) junctional adhesion molec ( 298) 1936 232.1 1e-60
NP_001257337 (OMIM: 606870) junctional adhesion mo ( 312) 1870 224.7 1.8e-58
NP_001257336 (OMIM: 606870) junctional adhesion mo ( 262) 1431 175.1 1.3e-43
NP_116190 (OMIM: 606871,613730) junctional adhesio ( 310) 642 86.2 8.6e-17
NP_058642 (OMIM: 605721) junctional adhesion molec ( 299) 563 77.3 4e-14
NP_001192258 (OMIM: 606871,613730) junctional adhe ( 259) 456 65.2 1.6e-10
NP_005805 (OMIM: 602171) cell surface A33 antigen ( 319) 271 44.4 0.00034
XP_016855494 (OMIM: 602171) PREDICTED: cell surfac ( 211) 239 40.6 0.0032
NP_001316849 (OMIM: 606011) V-set and immunoglobul ( 284) 233 40.1 0.0062
NP_055127 (OMIM: 606011) V-set and immunoglobulin ( 327) 233 40.2 0.0068
>>NP_067042 (OMIM: 606870) junctional adhesion molecule (298 aa)
initn: 1936 init1: 1936 opt: 1936 Z-score: 1211.2 bits: 232.1 E(85289): 1e-60
Smith-Waterman score: 1936; 100.0% identity (100.0% similar) in 298 aa overlap (1-298:1-298)
10 20 30 40 50 60
pF1KB8 MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQEAILACKTPKKTVSSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQEAILACKTPKKTVSSR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 LEWKKLGRSVSFVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 LEWKKLGRSVSFVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 LEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLNISGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 LGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLNISGI
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 IAAVVVVALVISVCGLGVCYAQRKGYFSKETSFQKSNSSSKATTMSENDFKHTKSFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 IAAVVVVALVISVCGLGVCYAQRKGYFSKETSFQKSNSSSKATTMSENDFKHTKSFII
250 260 270 280 290
>>NP_001257337 (OMIM: 606870) junctional adhesion molecu (312 aa)
initn: 1870 init1: 1870 opt: 1870 Z-score: 1170.8 bits: 224.7 E(85289): 1.8e-58
Smith-Waterman score: 1870; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288)
10 20 30 40 50 60
pF1KB8 MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQEAILACKTPKKTVSSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQEAILACKTPKKTVSSR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 LEWKKLGRSVSFVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEWKKLGRSVSFVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 LEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB8 LGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLNISGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLNISGI
190 200 210 220 230 240
250 260 270 280 290
pF1KB8 IAAVVVVALVISVCGLGVCYAQRKGYFSKETSFQKSNSSSKATTMSENDFKHTKSFII
::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAAVVVVALVISVCGLGVCYAQRKGYFSKETSFQKSNSSSKATTMSENVQWLTPVIPALW
250 260 270 280 290 300
NP_001 KAAAGGSRGQEF
310
>>NP_001257336 (OMIM: 606870) junctional adhesion molecu (262 aa)
initn: 1431 init1: 1431 opt: 1431 Z-score: 904.1 bits: 175.1 E(85289): 1.3e-43
Smith-Waterman score: 1622; 87.9% identity (87.9% similar) in 298 aa overlap (1-298:1-262)
10 20 30 40 50 60
pF1KB8 MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQEAILACKTPKKTVSSR
::::::::::::::::::::::::::::::::::::::::::::
NP_001 MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQ----------------
10 20 30 40
70 80 90 100 110 120
pF1KB8 LEWKKLGRSVSFVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQN
::::::::::::::::::::::::::::::::::::::::
NP_001 --------------------GDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQN
50 60 70 80
130 140 150 160 170 180
pF1KB8 LEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPR
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB8 LGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLNISGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLNISGI
150 160 170 180 190 200
250 260 270 280 290
pF1KB8 IAAVVVVALVISVCGLGVCYAQRKGYFSKETSFQKSNSSSKATTMSENDFKHTKSFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAAVVVVALVISVCGLGVCYAQRKGYFSKETSFQKSNSSSKATTMSENDFKHTKSFII
210 220 230 240 250 260
>>NP_116190 (OMIM: 606871,613730) junctional adhesion mo (310 aa)
initn: 551 init1: 436 opt: 642 Z-score: 422.5 bits: 86.2 E(85289): 8.6e-17
Smith-Waterman score: 642; 36.7% identity (70.3% similar) in 300 aa overlap (9-298:19-310)
10 20 30 40 50
pF1KB8 MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQEAILAC
.::::.: ... : .... . :: :.. . :.:
NP_116 MALRRPPRLRLCARLPDFFLLLLFRGCLIG-----AVNLKSSNRTPVVQ--EFESVELSC
10 20 30 40 50
60 70 80 90 100
pF1KB8 K-TPKKTVSSRLEWKKL-GRSVSFVYYQQTLQGDFKNRAEMID-FNIRIKNVTRSDAGKY
: ..: . :.::::. .....:.... .:::. .:::.. ...: :::: :.. :
NP_116 IITDSQTSDPRIEWKKIQDEQTTYVFFDNKIQGDLAGRAEILGKTSLKIWNVTRRDSALY
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB8 RCEVSAPSEQGQNLEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYT
:::: : ... ....: .. : : : :..: :.::... : .. :.::..::.: :.:.
NP_116 RCEVVARNDR-KEIDEIVIELTVQVKPVTPVCRVPKAVPVGKMATLHCQESEGHPRPHYS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB8 WFKDGIRLLENPRLGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPG
:... . : . : . . :::. .:..:::: :..: : :.:.: : : :..: ::
NP_116 WYRNDVPLPTDSRANPRFRNSSFHLNSETGTLVFTAVHKDDSGQYYCIASNDAGSARCEE
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB8 KRMQVDDLNISGIIAAVVVVALVISVCGLGVCYAQRKGYF--SKET--SFQ---KSNSSS
..:.: ::::.:::..:.:: :... ::.: : :.::: .:. :.. : .. .
NP_116 QEMEVYDLNIGGIIGGVLVVLAVLALITLGICCAYRRGYFINNKQDGESYKNPGKPDGVN
240 250 260 270 280 290
290
pF1KB8 KATTMSENDFKHTKSFII
: :.::.: .::.:
NP_116 YIRTDEEGDFRHKSSFVI
300 310
>>NP_058642 (OMIM: 605721) junctional adhesion molecule (299 aa)
initn: 417 init1: 319 opt: 563 Z-score: 374.5 bits: 77.3 E(85289): 4e-14
Smith-Waterman score: 563; 35.2% identity (64.5% similar) in 301 aa overlap (2-298:5-299)
10 20 30 40 50
pF1KB8 MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQEAILACKTPKKTV
:. :. : :..: :. .:. .. :. . : : . . :.: .
NP_058 MGTKAQVERKLLCLFILAILLCSLALGSVTVHSSEPE---VRIPENNPVKLSCAYSGFS-
10 20 30 40 50
60 70 80 90 100 110
pF1KB8 SSRLEWK-KLGRSVSFVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSE
: :.::: : .. .: :.. . .....:. .. .: .:.::: :.: : : :: :
NP_058 SPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVS--EE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB8 QGQNLEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLL
:.. : : : ::: :. :. ..:::: :. . : :....:.: ::::::::: .
NP_058 GGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMP
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB8 ENPRLGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGK-RMQVDDL
::. .::::..: :: : :. .: :::::::::::. : . ::.. .
NP_058 TNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAVER
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB8 NISGIIAAVVVVALVISVCGLGVCYAQRKGYF--SKETSFQKSNSSSKATTMSENDFKHT
:.. :.:::.:. ..... .:. .: .:.: .:. . .:. :. .. ::..::.:
NP_058 NVGVIVAAVLVTLILLGILVFGIWFAYSRGHFDRTKKGTSSKKVIYSQPSARSEGEFKQT
240 250 260 270 280 290
pF1KB8 KSFII
.::..
NP_058 SSFLV
>>NP_001192258 (OMIM: 606871,613730) junctional adhesion (259 aa)
initn: 478 init1: 421 opt: 456 Z-score: 310.1 bits: 65.2 E(85289): 1.6e-10
Smith-Waterman score: 456; 36.3% identity (69.2% similar) in 201 aa overlap (110-298:59-259)
80 90 100 110 120 130
pF1KB8 QGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQNLEEDTVTL-----EVLVAP
..: : . ...... .: .. : :
NP_001 IGAVNLKSSNRTPVVQEFESVELSCIITDSQTSDPRIEWKKIQDEQTTYVFFDNKIQVKP
30 40 50 60 70 80
140 150 160 170 180 190
pF1KB8 AVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPRLGSQSTNSSYTMNT
..: :.::... : .. :.::..::.: :.:.:... . : . : . . :::. .:.
NP_001 VTPVCRVPKAVPVGKMATLHCQESEGHPRPHYSWYRNDVPLPTDSRANPRFRNSSFHLNS
90 100 110 120 130 140
200 210 220 230 240 250
pF1KB8 KTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLNISGIIAAVVVVALVISVC
.:::: :..: : :.:.: : : :..: :: ..:.: ::::.:::..:.:: :...
NP_001 ETGTLVFTAVHKDDSGQYYCIASNDAGSARCEEQEMEVYDLNIGGIIGGVLVVLAVLALI
150 160 170 180 190 200
260 270 280 290
pF1KB8 GLGVCYAQRKGYF--SKET--SFQ---KSNSSSKATTMSENDFKHTKSFII
::.: : :.::: .:. :.. : .. . : :.::.: .::.:
NP_001 TLGICCAYRRGYFINNKQDGESYKNPGKPDGVNYIRTDEEGDFRHKSSFVI
210 220 230 240 250
>>NP_005805 (OMIM: 602171) cell surface A33 antigen prec (319 aa)
initn: 188 init1: 146 opt: 271 Z-score: 196.3 bits: 44.4 E(85289): 0.00034
Smith-Waterman score: 298; 27.2% identity (56.6% similar) in 265 aa overlap (30-270:23-272)
10 20 30 40 50 60
pF1KB8 MARRSRHRLLLLLLRYLVVALGYHKAYGFSAPKDQQVVTAVEYQEAILACKTPKKTVSSR
:. :.:. : . . . : : : . ..:::
NP_005 MVGKMWPVLWTLCAVRVTVDAISVETPQDVLRASQGKSVTLPC-TYHTSTSSR
10 20 30 40 50
70 80 90 100
pF1KB8 ---LEWKKL-----GRSVSFVYYQQT-LQGD-FKNR------AEMIDFNIRIKNVTRSDA
..: :: : : . . ... ..:. .::: ::. : .: : ..: .:
NP_005 EGLIQWDKLLLTHTERVVIWPFSNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADN
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB8 GKYRCEVSAPSEQGQNLEEDTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAP
: :.: :: :. : . . : : ::: :. : : . . .. :. ..: ::.:::.:.:
NP_005 GTYECSVSLMSDLEGNTK-SRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTP
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB8 EYTWFKDGIRLLENPRLGSQSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRR
.:.: . .: :.: :.. .... .... .: .: : : . : : .
NP_005 QYSWKRYNILNQEQP-LAQPASGQPVSLKN---------ISTDTSGYYICTSSNEEGTQF
180 190 200 210 220
230 240 250 260 270
pF1KB8 CPGK-RMQVDDLNIS-------GIIAAVVVVALVISVCGLGVCYAQRKGYFSKETSFQKS
: .. ..:.. :..::.......: : : .. . .::
NP_005 CNITVAVRSPSMNVALYVGIAVGVVAALIIIGIIIYCC---CCRGKDDNTEDKEDARPNR
230 240 250 260 270
280 290
pF1KB8 NSSSKATTMSENDFKHTKSFII
NP_005 EAYEEPPEQLRELSREREEEDDYRQEEQRSTGRESPDHLDQ
280 290 300 310
>>XP_016855494 (OMIM: 602171) PREDICTED: cell surface A3 (211 aa)
initn: 206 init1: 146 opt: 239 Z-score: 178.9 bits: 40.6 E(85289): 0.0032
Smith-Waterman score: 241; 26.6% identity (57.1% similar) in 177 aa overlap (102-270:2-164)
80 90 100 110 120 130
pF1KB8 FVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQNLEEDTVTLEVL
.: : :.: :: :. : . . : : ::
XP_016 MADNGTYECSVSLMSDLEGNTK-SRVRLLVL
10 20 30
140 150 160 170 180 190
pF1KB8 VAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPRLGSQSTNSSYT
: :. : : . . .. :. ..: ::.:::.:.:.:.: . .: :.: :.. .... .
XP_016 VPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQP-LAQPASGQPVS
40 50 60 70 80
200 210 220 230 240
pF1KB8 MNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGK-RMQVDDLNIS-------GIIAA
... .: .: : : . : : . : .. ..:.. :..::
XP_016 LKN---------ISTDTSGYYICTSSNEEGTQFCNITVAVRSPSMNVALYVGIAVGVVAA
90 100 110 120 130 140
250 260 270 280 290
pF1KB8 VVVVALVISVCGLGVCYAQRKGYFSKETSFQKSNSSSKATTMSENDFKHTKSFII
.......: : : .. . .::
XP_016 LIIIGIIIYCC---CCRGKDDNTEDKEDARPNREAYEEPPEQLRELSREREEEDDYRQEE
150 160 170 180 190
>>NP_001316849 (OMIM: 606011) V-set and immunoglobulin d (284 aa)
initn: 154 init1: 118 opt: 233 Z-score: 173.7 bits: 40.1 E(85289): 0.0062
Smith-Waterman score: 235; 28.0% identity (57.1% similar) in 182 aa overlap (94-271:106-277)
70 80 90 100 110 120
pF1KB8 KKLGRSVSFVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQNLEE
... .: ::.: : :.:. : . :
NP_001 YFTNGHLYPTGSKSKRVSLLQNPPTVGVATLKLTDVHPSDTGTYLCQVNNPPDFYTN-GL
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB8 DTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPRLGS
..: ::: :. : : ... : . :::...:: : : :.: . : . .: ::
NP_001 GLINLTVLVPPSNPLCSQSGQTSVGGSTALRCSSSEGAPKPVYNWVRLGT--FPTPSPGS
140 150 160 170 180 190
190 200 210 220 230 240
pF1KB8 QSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLN---ISGI
. ... .: : ....: ..: : : : :..: : ..: . . ..:
NP_001 M------VQDEVSGQLILTNLSLTSSGTYRCVATNQMGSASCE-LTLSVTEPSQGRVAGA
200 210 220 230 240
250 260 270 280 290
pF1KB8 IAAVVVVALVISVCGLGVCYAQR-KGYFSKETSFQKSNSSSKATTMSENDFKHTKSFII
. .:.. .:..:: .. . :. .: :::
NP_001 LIGVLLGVLLLSVAAFCLVRFQKERGKKPKETYGGSDLR
250 260 270 280
>>NP_055127 (OMIM: 606011) V-set and immunoglobulin doma (327 aa)
initn: 118 init1: 118 opt: 233 Z-score: 173.0 bits: 40.2 E(85289): 0.0068
Smith-Waterman score: 235; 28.0% identity (57.1% similar) in 182 aa overlap (94-271:106-277)
70 80 90 100 110 120
pF1KB8 KKLGRSVSFVYYQQTLQGDFKNRAEMIDFNIRIKNVTRSDAGKYRCEVSAPSEQGQNLEE
... .: ::.: : :.:. : . :
NP_055 YFTNGHLYPTGSKSKRVSLLQNPPTVGVATLKLTDVHPSDTGTYLCQVNNPPDFYTN-GL
80 90 100 110 120 130
130 140 150 160 170 180
pF1KB8 DTVTLEVLVAPAVPSCEVPSSALSGTVVELRCQDKEGNPAPEYTWFKDGIRLLENPRLGS
..: ::: :. : : ... : . :::...:: : : :.: . : . .: ::
NP_055 GLINLTVLVPPSNPLCSQSGQTSVGGSTALRCSSSEGAPKPVYNWVRLGT--FPTPSPGS
140 150 160 170 180 190
190 200 210 220 230 240
pF1KB8 QSTNSSYTMNTKTGTLQFNTVSKLDTGEYSCEARNSVGYRRCPGKRMQVDDLN---ISGI
. ... .: : ....: ..: : : : :..: : ..: . . ..:
NP_055 M------VQDEVSGQLILTNLSLTSSGTYRCVATNQMGSASCE-LTLSVTEPSQGRVAGA
200 210 220 230 240
250 260 270 280 290
pF1KB8 IAAVVVVALVISVCGLGVCYAQR-KGYFSKETSFQKSNSSSKATTMSENDFKHTKSFII
. .:.. .:..:: .. . :. .: :::
NP_055 LIGVLLGVLLLSVAAFCLVRFQKERGKKPKETYGGSDLREDAIAPGISEHTCMRADSSKG
250 260 270 280 290 300
NP_055 FLERPSSASTVTTTKSKLPMVV
310 320
298 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 12:17:20 2016 done: Fri Nov 4 12:17:21 2016
Total Scan time: 5.410 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]