Result of FASTA (omim) for pFN21AB8361
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8361, 144 aa
  1>>>pF1KB8361 144 - 144 aa - 144 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7700+/-0.000331; mu= 15.1641+/- 0.021
 mean_var=82.8550+/-16.553, 0's: 0 Z-trim(116.8): 29  B-trim: 144 in 2/53
 Lambda= 0.140901
 statistics sampled from 28177 (28211) to 28177 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.331), width:  16
 Scan time:  4.860

The best scores are:                                      opt bits E(85289)
NP_000291 (OMIM: 172411) phospholipase A2, membran ( 144) 1026 217.4 6.2e-57
NP_001155201 (OMIM: 172411) phospholipase A2, memb ( 144) 1026 217.4 6.2e-57
NP_001155200 (OMIM: 172411) phospholipase A2, memb ( 144) 1026 217.4 6.2e-57
NP_001155199 (OMIM: 172411) phospholipase A2, memb ( 144) 1026 217.4 6.2e-57
NP_036532 (OMIM: 605630) group IID secretory phosp ( 145)  520 114.6 5.8e-26
XP_011539893 (OMIM: 228980,601192) PREDICTED: calc ( 138)  462 102.8   2e-22
XP_011539889 (OMIM: 228980,601192) PREDICTED: calc ( 138)  462 102.8   2e-22
NP_000920 (OMIM: 228980,601192) calcium-dependent  ( 138)  462 102.8   2e-22
XP_011539892 (OMIM: 228980,601192) PREDICTED: calc ( 138)  462 102.8   2e-22
XP_011539891 (OMIM: 228980,601192) PREDICTED: calc ( 138)  462 102.8   2e-22
XP_005245950 (OMIM: 228980,601192) PREDICTED: calc ( 138)  462 102.8   2e-22
XP_011539894 (OMIM: 228980,601192) PREDICTED: calc ( 138)  462 102.8   2e-22
XP_011539890 (OMIM: 228980,601192) PREDICTED: calc ( 138)  462 102.8   2e-22
XP_005245948 (OMIM: 228980,601192) PREDICTED: calc ( 169)  462 102.9 2.3e-22
XP_005245949 (OMIM: 228980,601192) PREDICTED: calc ( 169)  462 102.9 2.3e-22
XP_011539888 (OMIM: 228980,601192) PREDICTED: calc ( 169)  462 102.9 2.3e-22
XP_011540258 (OMIM: 616793) PREDICTED: group IIF s ( 211)  414 93.2 2.3e-19
NP_073730 (OMIM: 616793) group IIF secretory phosp ( 211)  414 93.2 2.3e-19
NP_003552 (OMIM: 603603) group 10 secretory phosph ( 165)  363 82.7 2.5e-16
NP_000919 (OMIM: 172410) phospholipase A2 precurso ( 148)  338 77.6   8e-15
XP_011540257 (OMIM: 616793) PREDICTED: group IIF s ( 219)  303 70.7 1.4e-12
NP_001073868 (OMIM: 601658) otoconin-90 precursor  ( 477)  272 64.7 1.9e-10
XP_011520997 (OMIM: 603603) PREDICTED: group 10 se ( 133)  239 57.4 8.5e-09
XP_011521000 (OMIM: 603603) PREDICTED: group 10 se ( 120)  238 57.2 9.1e-09
XP_011520999 (OMIM: 603603) PREDICTED: group 10 se ( 124)  238 57.2 9.4e-09
XP_011520998 (OMIM: 603603) PREDICTED: group 10 se ( 131)  238 57.2 9.7e-09
NP_001258743 (OMIM: 605630) group IID secretory ph (  62)  227 54.6 2.8e-08


>>NP_000291 (OMIM: 172411) phospholipase A2, membrane as  (144 aa)
 initn: 1026 init1: 1026 opt: 1026  Z-score: 1143.1  bits: 217.4 E(85289): 6.2e-57
Smith-Waterman score: 1026; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
               70        80        90       100       110       120

              130       140    
pF1KB8 NKTTYNKKYQYYSNKHCRGSTPRC
       ::::::::::::::::::::::::
NP_000 NKTTYNKKYQYYSNKHCRGSTPRC
              130       140    

>>NP_001155201 (OMIM: 172411) phospholipase A2, membrane  (144 aa)
 initn: 1026 init1: 1026 opt: 1026  Z-score: 1143.1  bits: 217.4 E(85289): 6.2e-57
Smith-Waterman score: 1026; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
               70        80        90       100       110       120

              130       140    
pF1KB8 NKTTYNKKYQYYSNKHCRGSTPRC
       ::::::::::::::::::::::::
NP_001 NKTTYNKKYQYYSNKHCRGSTPRC
              130       140    

>>NP_001155200 (OMIM: 172411) phospholipase A2, membrane  (144 aa)
 initn: 1026 init1: 1026 opt: 1026  Z-score: 1143.1  bits: 217.4 E(85289): 6.2e-57
Smith-Waterman score: 1026; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
               70        80        90       100       110       120

              130       140    
pF1KB8 NKTTYNKKYQYYSNKHCRGSTPRC
       ::::::::::::::::::::::::
NP_001 NKTTYNKKYQYYSNKHCRGSTPRC
              130       140    

>>NP_001155199 (OMIM: 172411) phospholipase A2, membrane  (144 aa)
 initn: 1026 init1: 1026 opt: 1026  Z-score: 1143.1  bits: 217.4 E(85289): 6.2e-57
Smith-Waterman score: 1026; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
               70        80        90       100       110       120

              130       140    
pF1KB8 NKTTYNKKYQYYSNKHCRGSTPRC
       ::::::::::::::::::::::::
NP_001 NKTTYNKKYQYYSNKHCRGSTPRC
              130       140    

>>NP_036532 (OMIM: 605630) group IID secretory phospholi  (145 aa)
 initn: 495 init1: 329 opt: 520  Z-score: 587.2  bits: 114.6 E(85289): 5.8e-26
Smith-Waterman score: 520; 46.9% identity (73.1% similar) in 145 aa overlap (1-144:1-145)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       :.  :: ..... :..  .:...:...:.: .:::   :::  ::::::.::::.:::::
NP_036 MELALLCGLVVMAGVIPIQGGILNLNKMVKQVTGKMPILSYWPYGCHCGLGGRGQPKDAT
               10        20        30        40        50        60

               70        80        90       100        110         
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDS-CRSQLCECDKAAATCFA
       : :: :::::: .:. .::.     :... : . : :. . : :..::: ::: .: :. 
NP_036 DWCCQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVAFCLK
               70        80        90       100       110       120

     120       130       140    
pF1KB8 RNKTTYNKKYQYYSNKHCRGSTPRC
       ::  ::.:. ..:   ::::.:: :
NP_036 RNLDTYQKRLRFYWRPHCRGQTPGC
              130       140     

>>XP_011539893 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 469 init1: 455 opt: 462  Z-score: 523.7  bits: 102.8 E(85289): 2e-22
Smith-Waterman score: 462; 45.3% identity (70.8% similar) in 137 aa overlap (1-137:1-137)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       :: :: :: ..  ..  ..:.:.... ::. .:::.:  .::::::.:: ::::.:::.:
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
       : :: .:: :: :::..::. .  :::.  . . .::     :. .:: ::.  . :. :
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130       140    
pF1KB8 NKTTYNKKYQYYSNKHCRGSTPRC
       :  .:: .:::. :  :       
XP_011 NLRSYNPQYQYFPNILCS      
              130              

>>XP_011539889 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 469 init1: 455 opt: 462  Z-score: 523.7  bits: 102.8 E(85289): 2e-22
Smith-Waterman score: 462; 45.3% identity (70.8% similar) in 137 aa overlap (1-137:1-137)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       :: :: :: ..  ..  ..:.:.... ::. .:::.:  .::::::.:: ::::.:::.:
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
       : :: .:: :: :::..::. .  :::.  . . .::     :. .:: ::.  . :. :
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130       140    
pF1KB8 NKTTYNKKYQYYSNKHCRGSTPRC
       :  .:: .:::. :  :       
XP_011 NLRSYNPQYQYFPNILCS      
              130              

>>NP_000920 (OMIM: 228980,601192) calcium-dependent phos  (138 aa)
 initn: 469 init1: 455 opt: 462  Z-score: 523.7  bits: 102.8 E(85289): 2e-22
Smith-Waterman score: 462; 45.3% identity (70.8% similar) in 137 aa overlap (1-137:1-137)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       :: :: :: ..  ..  ..:.:.... ::. .:::.:  .::::::.:: ::::.:::.:
NP_000 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
       : :: .:: :: :::..::. .  :::.  . . .::     :. .:: ::.  . :. :
NP_000 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130       140    
pF1KB8 NKTTYNKKYQYYSNKHCRGSTPRC
       :  .:: .:::. :  :       
NP_000 NLRSYNPQYQYFPNILCS      
              130              

>>XP_011539892 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 469 init1: 455 opt: 462  Z-score: 523.7  bits: 102.8 E(85289): 2e-22
Smith-Waterman score: 462; 45.3% identity (70.8% similar) in 137 aa overlap (1-137:1-137)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       :: :: :: ..  ..  ..:.:.... ::. .:::.:  .::::::.:: ::::.:::.:
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
       : :: .:: :: :::..::. .  :::.  . . .::     :. .:: ::.  . :. :
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130       140    
pF1KB8 NKTTYNKKYQYYSNKHCRGSTPRC
       :  .:: .:::. :  :       
XP_011 NLRSYNPQYQYFPNILCS      
              130              

>>XP_011539891 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 469 init1: 455 opt: 462  Z-score: 523.7  bits: 102.8 E(85289): 2e-22
Smith-Waterman score: 462; 45.3% identity (70.8% similar) in 137 aa overlap (1-137:1-137)

               10        20        30        40        50        60
pF1KB8 MKTLLLLAVIMIFGLLQAHGNLVNFHRMIKLTTGKEAALSYGFYGCHCGVGGRGSPKDAT
       :: :: :: ..  ..  ..:.:.... ::. .:::.:  .::::::.:: ::::.:::.:
XP_011 MKGLLPLAWFLACSVPAVQGGLLDLKSMIEKVTGKNALTNYGFYGCYCGWGGRGTPKDGT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DRCCVTHDCCYKRLEKRGCGTKFLSYKFSNSGSRITCAKQDSCRSQLCECDKAAATCFAR
       : :: .:: :: :::..::. .  :::.  . . .::     :. .:: ::.  . :. :
XP_011 DWCCWAHDHCYGRLEEKGCNIRTQSYKYRFAWGVVTCEPGPFCHVNLCACDRKLVYCLKR
               70        80        90       100       110       120

              130       140    
pF1KB8 NKTTYNKKYQYYSNKHCRGSTPRC
       :  .:: .:::. :  :       
XP_011 NLRSYNPQYQYFPNILCS      
              130              




144 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 12:08:19 2016 done: Fri Nov  4 12:08:19 2016
 Total Scan time:  4.860 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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