Result of FASTA (omim) for pFN21AB8352
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8352, 693 aa
  1>>>pF1KB8352 693 - 693 aa - 693 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.9604+/-0.000429; mu= -13.8744+/- 0.027
 mean_var=607.8393+/-133.160, 0's: 0 Z-trim(123.8): 97  B-trim: 0 in 0/61
 Lambda= 0.052021
 statistics sampled from 44050 (44179) to 44050 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.796), E-opt: 0.2 (0.518), width:  16
 Scan time: 12.650

The best scores are:                                      opt bits E(85289)
XP_005274725 (OMIM: 300283) PREDICTED: interleukin ( 708) 3471 275.8 3.8e-73
NP_001020413 (OMIM: 300283) interleukin-1 receptor ( 682) 2933 235.5 5.3e-61
NP_001560 (OMIM: 300283) interleukin-1 receptor-as ( 712) 2933 235.5 5.5e-61
NP_001020414 (OMIM: 300283) interleukin-1 receptor ( 633) 2665 215.3 5.8e-55
XP_011529460 (OMIM: 300283) PREDICTED: interleukin ( 603) 2663 215.1 6.2e-55
NP_001561 (OMIM: 603304) interleukin-1 receptor-as ( 625)  705 68.2 1.1e-10
NP_001135995 (OMIM: 604459,611064) interleukin-1 r ( 535)  586 59.2 4.8e-08
NP_009130 (OMIM: 604459,611064) interleukin-1 rece ( 596)  586 59.2 5.2e-08
NP_057207 (OMIM: 606883,607676,610799) interleukin ( 460)  475 50.8 1.4e-05
XP_005269002 (OMIM: 606883,607676,610799) PREDICTE ( 460)  475 50.8 1.4e-05
NP_001107654 (OMIM: 606883,607676,610799) interleu ( 460)  475 50.8 1.4e-05
XP_011536734 (OMIM: 606883,607676,610799) PREDICTE ( 460)  475 50.8 1.4e-05
XP_011536735 (OMIM: 606883,607676,610799) PREDICTE ( 460)  475 50.8 1.4e-05
XP_011536733 (OMIM: 606883,607676,610799) PREDICTE ( 460)  475 50.8 1.4e-05
XP_006719501 (OMIM: 606883,607676,610799) PREDICTE ( 460)  475 50.8 1.4e-05
XP_016874879 (OMIM: 606883,607676,610799) PREDICTE ( 460)  475 50.8 1.4e-05
XP_005269000 (OMIM: 606883,607676,610799) PREDICTE ( 460)  475 50.8 1.4e-05
XP_005269001 (OMIM: 606883,607676,610799) PREDICTE ( 460)  475 50.8 1.4e-05
XP_016874880 (OMIM: 606883,607676,610799) PREDICTE ( 336)  463 49.7 2.1e-05
XP_005269004 (OMIM: 606883,607676,610799) PREDICTE ( 336)  463 49.7 2.1e-05
XP_005269006 (OMIM: 606883,607676,610799) PREDICTE ( 336)  463 49.7 2.1e-05
XP_005269005 (OMIM: 606883,607676,610799) PREDICTE ( 336)  463 49.7 2.1e-05
NP_001138728 (OMIM: 606883,607676,610799) interleu ( 336)  463 49.7 2.1e-05
NP_001138730 (OMIM: 606883,607676,610799) interleu ( 336)  463 49.7 2.1e-05
NP_001138729 (OMIM: 606883,607676,610799) interleu ( 336)  463 49.7 2.1e-05
XP_006719502 (OMIM: 606883,607676,610799) PREDICTE ( 336)  463 49.7 2.1e-05
XP_006719505 (OMIM: 606883,607676,610799) PREDICTE ( 257)  449 48.6 3.6e-05
XP_006719504 (OMIM: 606883,607676,610799) PREDICTE ( 257)  449 48.6 3.6e-05
XP_006719503 (OMIM: 606883,607676,610799) PREDICTE ( 257)  449 48.6 3.6e-05
XP_006719506 (OMIM: 606883,607676,610799) PREDICTE ( 257)  449 48.6 3.6e-05


>>XP_005274725 (OMIM: 300283) PREDICTED: interleukin-1 r  (708 aa)
 initn: 3471 init1: 3471 opt: 3471  Z-score: 1434.1  bits: 275.8 E(85289): 3.8e-73
Smith-Waterman score: 4721; 97.9% identity (97.9% similar) in 708 aa overlap (1-693:1-708)

               10        20        30        40        50        60
pF1KB8 MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFGGWRRAAGGREARGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFGGWRRAAGGREARGL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 LAPTPDAPRPAAALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAPTPDAPRPAAALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 ARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 GPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 ELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 AGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 SLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB8 YIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQS
              430       440       450       460       470       480

              490       500                      510       520     
pF1KB8 TLQAGLAADAWAAPIAMQIYKKHL---------------GQLACCCLHRRAKRRPPMTQE
       ::::::::::::::::::::::::               :::::::::::::::::::::
XP_005 TLQAGLAADAWAAPIAMQIYKKHLDPRPGPCPPELGLGLGQLACCCLHRRAKRRPPMTQE
              490       500       510       520       530       540

         530       540       550       560       570       580     
pF1KB8 NSYVSSTGRAHSGAAPWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NSYVSSTGRAHSGAAPWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHL
              550       560       570       580       590       600

         590       600       610       620       630       640     
pF1KB8 TPSCPLDPAPLREAGCPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TPSCPLDPAPLREAGCPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINP
              610       620       630       640       650       660

         650       660       670       680       690   
pF1KB8 ARQKMVQKLALYEDGALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS
       ::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARQKMVQKLALYEDGALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS
              670       680       690       700        

>>NP_001020413 (OMIM: 300283) interleukin-1 receptor-ass  (682 aa)
 initn: 3268 init1: 2929 opt: 2933  Z-score: 1216.1  bits: 235.5 E(85289): 5.3e-61
Smith-Waterman score: 4470; 94.2% identity (94.2% similar) in 708 aa overlap (1-693:1-682)

               10        20        30        40        50        60
pF1KB8 MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFGGWRRAAGGREARGL
       :::::::::::::::::::::::::::::::::::::::::::::               
NP_001 MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQF---------------
               10        20        30        40                    

               70        80        90       100       110       120
pF1KB8 LAPTPDAPRPAAALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLR
                  :::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -----------AALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLR
                     50        60        70        80        90    

              130       140       150       160       170       180
pF1KB8 ARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHS
          100       110       120       130       140       150    

              190       200       210       220       230       240
pF1KB8 GPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSE
          160       170       180       190       200       210    

              250       260       270       280       290       300
pF1KB8 ELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDF
          220       230       240       250       260       270    

              310       320       330       340       350       360
pF1KB8 AGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSP
          280       290       300       310       320       330    

              370       380       390       400       410       420
pF1KB8 SLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEE
          340       350       360       370       380       390    

              430       440       450       460       470       480
pF1KB8 YIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQS
          400       410       420       430       440       450    

              490       500                      510       520     
pF1KB8 TLQAGLAADAWAAPIAMQIYKKHL---------------GQLACCCLHRRAKRRPPMTQE
       ::::::::::::::::::::::::               :::::::::::::::::::::
NP_001 TLQAGLAADAWAAPIAMQIYKKHLDPRPGPCPPELGLGLGQLACCCLHRRAKRRPPMTQE
          460       470       480       490       500       510    

         530       540       550       560       570       580     
pF1KB8 NSYVSSTGRAHSGAAPWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSYVSSTGRAHSGAAPWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHL
          520       530       540       550       560       570    

         590       600       610       620       630       640     
pF1KB8 TPSCPLDPAPLREAGCPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPSCPLDPAPLREAGCPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINP
          580       590       600       610       620       630    

         650       660       670       680       690   
pF1KB8 ARQKMVQKLALYEDGALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS
       ::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARQKMVQKLALYEDGALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS
          640       650       660       670       680  

>>NP_001560 (OMIM: 300283) interleukin-1 receptor-associ  (712 aa)
 initn: 4411 init1: 2929 opt: 2933  Z-score: 1215.9  bits: 235.5 E(85289): 5.5e-61
Smith-Waterman score: 4309; 90.2% identity (90.2% similar) in 725 aa overlap (1-680:1-699)

               10        20        30        40        50        60
pF1KB8 MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFGGWRRAAGGREARGL
       :::::::::::::::::::::::::::::::::::::::::::::               
NP_001 MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQF---------------
               10        20        30        40                    

               70        80        90       100       110       120
pF1KB8 LAPTPDAPRPAAALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLR
                  :::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -----------AALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLR
                     50        60        70        80        90    

              130       140       150       160       170       180
pF1KB8 ARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHS
          100       110       120       130       140       150    

              190       200       210       220       230       240
pF1KB8 GPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSE
          160       170       180       190       200       210    

              250       260       270       280       290       300
pF1KB8 ELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDF
          220       230       240       250       260       270    

              310       320       330       340       350       360
pF1KB8 AGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSP
          280       290       300       310       320       330    

              370       380       390       400       410       420
pF1KB8 SLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEE
          340       350       360       370       380       390    

              430       440       450       460       470       480
pF1KB8 YIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQS
          400       410       420       430       440       450    

              490       500                      510       520     
pF1KB8 TLQAGLAADAWAAPIAMQIYKKHL---------------GQLACCCLHRRAKRRPPMTQ-
       ::::::::::::::::::::::::               :::::::::::::::::::: 
NP_001 TLQAGLAADAWAAPIAMQIYKKHLDPRPGPCPPELGLGLGQLACCCLHRRAKRRPPMTQV
          460       470       480       490       500       510    

                                       530       540       550     
pF1KB8 -----------------------------ENSYVSSTGRAHSGAAPWQPLAAPSGASAQA
                                    :::::::::::::::::::::::::::::::
NP_001 YERLEKLQAVVAGVPGHSEAASCIPPSPQENSYVSSTGRAHSGAAPWQPLAAPSGASAQA
          520       530       540       550       560       570    

         560       570       580       590       600       610     
pF1KB8 AEQLQRGPNQPVESDESLGGLSAALRSWHLTPSCPLDPAPLREAGCPQGDTAGESSWGSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEQLQRGPNQPVESDESLGGLSAALRSWHLTPSCPLDPAPLREAGCPQGDTAGESSWGSG
          580       590       600       610       620       630    

         620       630       640       650       660       670     
pF1KB8 PGSRPTAVEGLALGSSASSSSEPPQIIINPARQKMVQKLALYEDGALDSLQLLSSSSLPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGSRPTAVEGLALGSSASSSSEPPQIIINPARQKMVQKLALYEDGALDSLQLLSSSSLPG
          640       650       660       670       680       690    

         680       690   
pF1KB8 LGLEQDRQGPEESDEFQS
       :::::             
NP_001 LGLEQDRQGPEESDEFQS
          700       710  

>>NP_001020414 (OMIM: 300283) interleukin-1 receptor-ass  (633 aa)
 initn: 4138 init1: 2656 opt: 2665  Z-score: 1107.8  bits: 215.3 E(85289): 5.8e-55
Smith-Waterman score: 4042; 88.7% identity (90.2% similar) in 693 aa overlap (1-693:1-633)

               10        20        30        40        50        60
pF1KB8 MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFGGWRRAAGGREARGL
       :::::::::::::::::::::::::::::::::::::::::::::               
NP_001 MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQF---------------
               10        20        30        40                    

               70        80        90       100       110       120
pF1KB8 LAPTPDAPRPAAALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLR
                  :::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 -----------AALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLR
                     50        60        70        80        90    

              130       140       150       160       170       180
pF1KB8 ARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHS
          100       110       120       130       140       150    

              190       200       210       220       230       240
pF1KB8 GPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSE
          160       170       180       190       200       210    

              250       260       270       280       290       300
pF1KB8 ELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDF
          220       230       240       250       260       270    

              310       320       330       340       350       360
pF1KB8 AGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSP
          280       290       300       310       320       330    

              370       380       390       400       410       420
pF1KB8 SLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEE
          340       350       360       370       380       390    

              430       440       450       460       470       480
pF1KB8 YIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQS
       ::::::::::::::::::::::::::::::::::::::::   : :.       :.. :.
NP_001 YIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYL---VYER-------LEKLQA
          400       410       420       430                 440    

              490       500       510       520       530       540
pF1KB8 TLQAGLAADAWAAPIAMQIYKKHLGQLACCCLHRRAKRRPPMTQENSYVSSTGRAHSGAA
       .. ::. . . ::                 :.       ::  :::::::::::::::::
NP_001 VV-AGVPGHSEAAS----------------CI-------PPSPQENSYVSSTGRAHSGAA
           450                              460       470       480

              550       560       570       580       590       600
pF1KB8 PWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHLTPSCPLDPAPLREAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHLTPSCPLDPAPLREAG
              490       500       510       520       530       540

              610       620       630       640       650       660
pF1KB8 CPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINPARQKMVQKLALYEDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINPARQKMVQKLALYEDG
              550       560       570       580       590       600

              670       680       690   
pF1KB8 ALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS
       :::::::::::::::::::::::::::::::::
NP_001 ALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS
              610       620       630   

>>XP_011529460 (OMIM: 300283) PREDICTED: interleukin-1 r  (603 aa)
 initn: 3066 init1: 2659 opt: 2663  Z-score: 1107.2  bits: 215.1 E(85289): 6.2e-55
Smith-Waterman score: 3942; 87.0% identity (87.0% similar) in 693 aa overlap (1-693:1-603)

               10        20        30        40        50        60
pF1KB8 MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFGGWRRAAGGREARGL
       :::::::::::::::::::::::::::::::::::::::::::::               
XP_011 MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQF---------------
               10        20        30        40                    

               70        80        90       100       110       120
pF1KB8 LAPTPDAPRPAAALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLR
                  :::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 -----------AALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLR
                     50        60        70        80        90    

              130       140       150       160       170       180
pF1KB8 ARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHS
          100       110       120       130       140       150    

              190       200       210       220       230       240
pF1KB8 GPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSE
          160       170       180       190       200       210    

              250       260       270       280       290       300
pF1KB8 ELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDF
          220       230       240       250       260       270    

              310       320       330       340       350       360
pF1KB8 AGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSP
          280       290       300       310       320       330    

              370       380       390       400       410       420
pF1KB8 SLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEE
          340       350       360       370       380       390    

              430       440       450       460       470       480
pF1KB8 YIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQS
       ::::::::::::::::::::::::::::::::::::::::                    
XP_011 YIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYL--------------------
          400       410       420       430                        

              490       500       510       520       530       540
pF1KB8 TLQAGLAADAWAAPIAMQIYKKHLGQLACCCLHRRAKRRPPMTQENSYVSSTGRAHSGAA
                                                   ::::::::::::::::
XP_011 --------------------------------------------ENSYVSSTGRAHSGAA
                                                      440       450

              550       560       570       580       590       600
pF1KB8 PWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHLTPSCPLDPAPLREAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHLTPSCPLDPAPLREAG
              460       470       480       490       500       510

              610       620       630       640       650       660
pF1KB8 CPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINPARQKMVQKLALYEDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINPARQKMVQKLALYEDG
              520       530       540       550       560       570

              670       680       690   
pF1KB8 ALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS
       :::::::::::::::::::::::::::::::::
XP_011 ALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS
              580       590       600   

>>NP_001561 (OMIM: 603304) interleukin-1 receptor-associ  (625 aa)
 initn: 648 init1: 194 opt: 705  Z-score: 312.9  bits: 68.2 E(85289): 1.1e-10
Smith-Waterman score: 787; 28.4% identity (55.3% similar) in 682 aa overlap (18-668:4-623)

               10        20        30        40        50        60
pF1KB8 MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFGGWRRAAGGREARGL
                        ..:..: ::.  . . ::::   :: .:               
NP_001               MACYIYQLPSWVLDDLCRNMDALSEWDWMEF---------------
                             10        20        30                

               70        80        90             100       110    
pF1KB8 LAPTPDAPRPAAALIVRDQTELRLCERSGQRTASV------LWPWINRNARVADLVHILT
                  :. .. : :.::   .: .:. .:      :: :  :.: : .:: .: 
NP_001 -----------ASYVITDLTQLRKI-KSMERVQGVSITRELLWWWGMRQATVQQLVDLLC
                         40         50        60        70         

          120       130            140       150       160         
pF1KB8 HLQLLRARDIITAWHP-PA---PLPS-PGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFL
       .:.: :: .::  :.: :    :.:. : .. :.     .  .::  . .  :   .:: 
NP_001 RLELYRAAQIILNWKPAPEIRCPIPAFPDSVKPEKPLAASVRKAEDEQEEGQPVRMATFP
      80        90       100       110       120       130         

     170       180          190       200           210       220  
pF1KB8 SPAFPGSQTHSGPELGLVP---SPASLWPPPPSPAPS----STKPGPESSVSLLQGARPF
       .:.   ...:. : .   :   .: ::    :. . :    .. :  :. .::  :   :
NP_001 GPGSSPARAHQ-PAFLQPPEEDAPHSLRSDLPTSSDSKDFSTSIPKQEKLLSL-AGDSLF
     140       150        160       170       180       190        

            230       240       250       260       270       280  
pF1KB8 PFCWPLCEISRGTHNFSEELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSF
          :   .. ..: .:... ::..: :. :::.  ..  .. :.:.:.:     .... :
NP_001 ---WSEADVVQATDDFNQNRKISQGTFADVYRGHRHGKPFVFKKLRETACSSPGSIERFF
          200       210       220       230       240       250    

            290       300       310       320       330       340  
pF1KB8 LTEVEQLSRFRHPNIVDFAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRL
        .:..   :  :::..   :.::   :. ..: .. ::::.:::. :  .  :: ::::.
NP_001 QAELQICLRCCHPNVLPVLGFCAARQFHSFIYPYMANGSLQDRLQGQG-GSDPLPWPQRV
          260       270       280       290       300        310   

            350       360       370       380       390       400  
pF1KB8 DILLGTARAIQFLHQDSPSLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSS
       .:  :   :...::  .  .::...::::::::. :::::.   .:..     .. :. .
NP_001 SICSGLLCAVEYLH--GLEIIHSNVKSSNVLLDQNLTPKLAH-PMAHLCPV--NKRSKYT
           320         330       340       350        360          

            410       420       430       440       450       460  
pF1KB8 MVARTQTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKD
       :. .:. .: . :::::..:..:.:.  .: :: :.:. :.:.:  :. .. . . ::::
NP_001 MM-KTHLLRTSAAYLPEDFIRVGQLTKRVDIFSCGIVLAEVLTGIPAMDNNRSPV-YLKD
      370        380       390       400       410       420       

            470       480       490       500                  510 
pF1KB8 LVEEEAEEAGVALRSTQSTLQAGLAADAWAAPIAMQIYKKHLGQL-----------ACCC
       :.  .   . ..: : .. ..  .: .     : ..  .:  :.:           :: :
NP_001 LLLSDIPSSTASLCSRKTGVENVMAKE-----ICQKYLEKGAGRLPEDCAEALATAACLC
        430       440       450            460       470       480 

             520       530       540       550       560       570 
pF1KB8 LHRRAKRRPPMTQENSYVSSTGRAHSGAAPWQPLAAPSGASAQAAEQLQRGPNQPVESDE
       :.::      .    . :    :..    ::. :.  .:.:... :. .   :. .... 
NP_001 LRRRNTSLQEVCGSVAAVEERLRGRETLLPWSGLSEGTGSSSNTPEETDDVDNSSLDASS
             490       500       510       520       530       540 

             580       590         600       610       620         
pF1KB8 SLGGLSAALRSWHLTPSCPLDPAP--LREAGCPQGDTAGESSWGSGPGSRPTAVEGLALG
       :   .:.:  .   ::  : . .   ::     ..:...:.  :  :   :  :      
NP_001 S---MSVAPWAGAATPLLPTENGEGRLRVIVGREADSSSEACVGLEP---PQDV------
                550       560       570       580                  

     630       640       650       660       670       680         
pF1KB8 SSASSSSEPPQIIINPARQKMVQKLALYEDGALDSLQLLSSSSLPGLGLEQDRQGPEESD
            .    :: :: :..:..... ::..  .::..:.                     
NP_001 -----TETSWQIEINEAKRKLMENILLYKEEKVDSIELFGP                   
          590       600       610       620                        

     690   
pF1KB8 EFQS

>>NP_001135995 (OMIM: 604459,611064) interleukin-1 recep  (535 aa)
 initn: 542 init1: 321 opt: 586  Z-score: 265.4  bits: 59.2 E(85289): 4.8e-08
Smith-Waterman score: 640; 33.7% identity (59.7% similar) in 419 aa overlap (231-643:97-488)

              210       220       230       240       250       260
pF1KB8 APSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSEELKIGEGGFGCVYRAVMRNT
                                     : .::.:: ... :::: .  :::. ..: 
NP_001 ETANVTVDNVLIPEHNEKGILLKSSISFQNIIEGTRNFHKDFLIGEGEIFEVYRVEIQNL
         70        80        90       100       110       120      

              270       280       290       300       310       320
pF1KB8 VYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDFAGYCAQNGFYCLVYGFLPNG
       .:::: .:..  ..     . ::.:.: :  :.::::...:.: ...  .::.: .. ::
NP_001 TYAVKLFKQEKKMQCKKHWKRFLSELEVLLLFHHPNILELAAYFTETEKFCLIYPYMRNG
        130       140       150       160       170       180      

              330       340       350       360        370         
pF1KB8 SLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSP-SLIHGDIKSSNVLLDERLT
       .: :::.:  .. : : :  :. ::.: ..::..::. .: :.: :.:.:.:.:::... 
NP_001 TLFDRLQCVGDTAP-LPWHIRIGILIGISKAIHYLHNVQPCSVICGSISSANILLDDQFQ
        190       200        210       220       230       240     

     380       390       400       410       420       430         
pF1KB8 PKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVV
       ::: ::..:.:         ::  .  :..    : :.:::::. :.:.. ::..:::.:
NP_001 PKLTDFAMAHFRSHL---EHQSCTINMTSSSSKHLWYMPEEYIRQGKLSIKTDVYSFGIV
         250       260          270       280       290       300  

     440       450       460       470       480       490         
pF1KB8 VLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQSTLQAGLAADAWAAPIAMQI
       ..:.:.: :.:     .   :.::..:  :. :  : :  : :.  .       :   . 
NP_001 IMEVLTGCRVV-LDDPKHIQLRDLLRELMEKRG--LDSCLSFLDKKV-------PPCPRN
            310        320       330         340              350  

     500       510       520        530       540       550        
pF1KB8 YKKHLGQLACCCLHRRAKRRPPMTQE-NSYVSSTGRAHSGAAPWQPLAAPSGASAQAAEQ
       .. .:  ::  :   ::: :: : .  :.  :. .  . .  :   : .    :    :.
NP_001 FSAKLFCLAGRCAATRAKLRPSMDEVLNTLESTQASLYFAEDPPTSLKSFRCPSPLFLEN
            360       370       380       390       400       410  

      560       570           580       590       600       610    
pF1KB8 LQRGPNQPVESDES----LGGLSAALRSWHLTPSCPLDPAPLREAGCPQGDTAGESSWGS
       .   :. :::.:::    :   . .::  ..: . :..        : :...    :  .
NP_001 V---PSIPVEDDESQNNNLLPSDEGLRIDRMTQKTPFE--------CSQSEVM-FLSLDK
               420       430       440               450        460

          620       630       640       650       660       670    
pF1KB8 GPGSRPTAVEGLALGSSASSSSEPPQIIINPARQKMVQKLALYEDGALDSLQLLSSSSLP
        : :. .  :.  . ::.   :  :. :.                               
NP_001 KPESKRNE-EACNMPSSSCEESWFPKYIVPSQDLRPYKVNIDPSSEAPGHSCRSRPVESS
               470       480       490       500       510         

>>NP_009130 (OMIM: 604459,611064) interleukin-1 receptor  (596 aa)
 initn: 611 init1: 321 opt: 586  Z-score: 264.8  bits: 59.2 E(85289): 5.2e-08
Smith-Waterman score: 654; 29.1% identity (53.5% similar) in 650 aa overlap (1-643:1-549)

               10        20        30        40        50        60
pF1KB8 MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFGGWRRAAGGREARGL
       :::. :    .: .:. .:...:: .. ..  :.:. . :      :::         ::
NP_009 MAGNCGA--RGALSAHTLLFDLPPALLGELCAVLDSCDGAL-----GWR---------GL
                 10        20        30             40             

               70         80        90       100       110         
pF1KB8 LAPTPDAPRPAAA-LIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLL
             : : ... : ::   .     .:: :   .:: : ..:  ..::...: ..   
NP_009 ------AERLSSSWLDVRHIEKYVDQGKSGTRE--LLWSWAQKNKTIGDLLQVLQEMGHR
                 50        60        70          80        90      

     120       130       140       150       160       170         
pF1KB8 RARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTH
       ::  .:: .                ... .:.:             ...   .::.   .
NP_009 RAIHLITNY----------------GAVLSPSE-------------KSYQEGGFPNILFK
        100                       110                    120       

     180       190       200       210       220       230         
pF1KB8 SGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFS
          : . :     :        :  .. :      ::...  :       .: .::.:: 
NP_009 ---ETANVTVDNVL-------IPEHNEKGI-----LLKSSISFQ------NIIEGTRNFH
          130              140            150             160      

     240       250       260       270       280       290         
pF1KB8 EELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVD
       ... :::: .  :::. ..: .:::: .:..  ..     . ::.:.: :  :.::::..
NP_009 KDFLIGEGEIFEVYRVEIQNLTYAVKLFKQEKKMQCKKHWKRFLSELEVLLLFHHPNILE
        170       180       190       200       210       220      

     300       310       320       330       340       350         
pF1KB8 FAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDS
       .:.: ...  .::.: .. ::.: :::.: .    :: :  :. ::.: ..::..::. .
NP_009 LAAYFTETEKFCLIYPYMRNGTLFDRLQC-VGDTAPLPWHIRIGILIGISKAIHYLHNVQ
        230       240       250        260       270       280     

     360        370       380       390       400       410        
pF1KB8 P-SLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLP
       : :.: :.:.:.:.:::... ::: ::..:.:    .    ::  .  :..    : :.:
NP_009 PCSVICGSISSANILLDDQFQPKLTDFAMAHFR---SHLEHQSCTINMTSSSSKHLWYMP
         290       300       310          320       330       340  

      420       430       440       450       460       470        
pF1KB8 EEYIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRST
       ::::. :.:.. ::..:::.:..:.:.: :.:     .   :.::..:  :. :  : : 
NP_009 EEYIRQGKLSIKTDVYSFGIVIMEVLTGCRVV-LDDPKHIQLRDLLRELMEKRG--LDSC
            350       360       370        380       390           

      480       490       500       510       520        530       
pF1KB8 QSTLQAGLAADAWAAPIAMQIYKKHLGQLACCCLHRRAKRRPPMTQE-NSYVSSTGRAHS
        : :.         .:   . .. .:  ::  :   ::: :: : .  :.  :. .  . 
NP_009 LSFLDK-------KVPPCPRNFSAKLFCLAGRCAATRAKLRPSMDEVLNTLESTQASLYF
     400              410       420       430       440       450  

       540       550       560       570           580       590   
pF1KB8 GAAPWQPLAAPSGASAQAAEQLQRGPNQPVESDES----LGGLSAALRSWHLTPSCPLDP
       .  :   : .    :    :..   :. :::.:::    :   . .::  ..: . :.. 
NP_009 AEDPPTSLKSFRCPSPLFLENV---PSIPVEDDESQNNNLLPSDEGLRIDRMTQKTPFE-
            460       470          480       490       500         

           600       610       620       630       640       650   
pF1KB8 APLREAGCPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINPARQKMVQK
              : :...    :  . : :. .  :.  . ::.   :  :. :.          
NP_009 -------CSQSEVM-FLSLDKKPESKRNE-EACNMPSSSCEESWFPKYIVPSQDLRPYKV
             510        520        530       540       550         

           660       670       680       690   
pF1KB8 LALYEDGALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS
                                               
NP_009 NIDPSSEAPGHSCRSRPVESSCSSKFSWDEYEQYKKE   
     560       570       580       590         

>>NP_057207 (OMIM: 606883,607676,610799) interleukin-1 r  (460 aa)
 initn: 551 init1: 253 opt: 475  Z-score: 221.2  bits: 50.8 E(85289): 1.4e-05
Smith-Waterman score: 609; 30.2% identity (56.3% similar) in 503 aa overlap (32-524:21-449)

              10        20        30        40        50        60 
pF1KB8 AGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFGGWRRAAGGREARGLL
                                     :. : ..: .     ::.. :      .. 
NP_057           MNKPITPSTYVRCLNVGLIRKLSDFIDPQE-----GWKKLA-----VAIK
                         10        20        30                  40

              70        80        90        100       110       120
pF1KB8 APTPDAPRPAAALIVRDQTELRLCERSGQR-TASVLWPWINRNARVADLVHILTHLQLLR
        :. :  :     : : .. :.    .:.  :. .:. : . :  :.::: .:       
NP_057 KPSGD-DRYNQFHIRRFEALLQ----TGKSPTSELLFDWGTTNCTVGDLVDLL-------
                50        60            70        80               

              130       140       150       160         170        
pF1KB8 ARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLP--SSASTFLSPAFPGSQT
          : . .  :: :  : ..    ...:.  :: . . ...:  ..  :...:.    :.
NP_057 ---IQNEFFAPASLLLPDAVPKTANTLPSK-EAITVQQKQMPFCDKDRTLMTPVQNLEQS
          90       100       110        120       130       140    

      180       190       200       210       220       230        
pF1KB8 HSGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNF
       .                :: : .:       :..   .. .:   : .   :..  :.::
NP_057 YM---------------PPDSSSP-------ENKSLEVSDTRFHSFSF--YELKNVTNNF
                         150              160       170         180

      240             250       260       270       280       290  
pF1KB8 SEEL------KIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRF
       .:.       :.:::::: ::.. . ::. :::.:   .:.    .::.:  :.. ... 
NP_057 DERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC
              190       200       210       220       230       240

            300       310       320       330       340       350  
pF1KB8 RHPNIVDFAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAI
       .: :.:.. :. ...   :::: ..::::: ::: :  .. ::::: .:  :  :.: .:
NP_057 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC-LDGTPPLSWHMRCKIAQGAANGI
              250       260       270        280       290         

            360       370       380       390        400       410 
pF1KB8 QFLHQDSPSLIHGDIKSSNVLLDERLTPKLGDFGLARFS-RFAGSSPSQSSMVARTQTVR
       .:::..    :: ::::.:.:::: .: :..:::::: : .::     :. :..:   . 
NP_057 NFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFA-----QTVMTSR---IV
     300         310       320       330       340                 

             420       430       440       450       460       470 
pF1KB8 GTLAYLPEEYIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEA
       :: ::.  : .. :...  .: .:::::.:: ..:  ::  :  . . : :. ::  .: 
NP_057 GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQLLLDIKEEIEDEE
     350       360        370       380       390        400       

             480       490       500       510       520       530 
pF1KB8 GVALRSTQSTLQAGLAADAWAAPIAMQIYKKHLGQLACCCLHRRAKRRPPMTQENSYVSS
           .. .. ..  .  :: .. .      . . ..:  :::.. ..:: . .       
NP_057 ----KTIEDYIDKKMN-DADSTSV------EAMYSVASQCLHEKKNKRPDIKKVQQLLQE
           410        420             430       440       450      

             540       550       560       570       580       590 
pF1KB8 TGRAHSGAAPWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHLTPSCPL
                                                                   
NP_057 MTAS                                                        
        460                                                        

>>XP_005269002 (OMIM: 606883,607676,610799) PREDICTED: i  (460 aa)
 initn: 551 init1: 253 opt: 475  Z-score: 221.2  bits: 50.8 E(85289): 1.4e-05
Smith-Waterman score: 609; 30.2% identity (56.3% similar) in 503 aa overlap (32-524:21-449)

              10        20        30        40        50        60 
pF1KB8 AGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFGGWRRAAGGREARGLL
                                     :. : ..: .     ::.. :      .. 
XP_005           MNKPITPSTYVRCLNVGLIRKLSDFIDPQE-----GWKKLA-----VAIK
                         10        20        30                  40

              70        80        90        100       110       120
pF1KB8 APTPDAPRPAAALIVRDQTELRLCERSGQR-TASVLWPWINRNARVADLVHILTHLQLLR
        :. :  :     : : .. :.    .:.  :. .:. : . :  :.::: .:       
XP_005 KPSGD-DRYNQFHIRRFEALLQ----TGKSPTSELLFDWGTTNCTVGDLVDLL-------
                50        60            70        80               

              130       140       150       160         170        
pF1KB8 ARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLP--SSASTFLSPAFPGSQT
          : . .  :: :  : ..    ...:.  :: . . ...:  ..  :...:.    :.
XP_005 ---IQNEFFAPASLLLPDAVPKTANTLPSK-EAITVQQKQMPFCDKDRTLMTPVQNLEQS
          90       100       110        120       130       140    

      180       190       200       210       220       230        
pF1KB8 HSGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNF
       .                :: : .:       :..   .. .:   : .   :..  :.::
XP_005 YM---------------PPDSSSP-------ENKSLEVSDTRFHSFSF--YELKNVTNNF
                         150              160       170         180

      240             250       260       270       280       290  
pF1KB8 SEEL------KIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRF
       .:.       :.:::::: ::.. . ::. :::.:   .:.    .::.:  :.. ... 
XP_005 DERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC
              190       200       210       220       230       240

            300       310       320       330       340       350  
pF1KB8 RHPNIVDFAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAI
       .: :.:.. :. ...   :::: ..::::: ::: :  .. ::::: .:  :  :.: .:
XP_005 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC-LDGTPPLSWHMRCKIAQGAANGI
              250       260       270        280       290         

            360       370       380       390        400       410 
pF1KB8 QFLHQDSPSLIHGDIKSSNVLLDERLTPKLGDFGLARFS-RFAGSSPSQSSMVARTQTVR
       .:::..    :: ::::.:.:::: .: :..:::::: : .::     :. :..:   . 
XP_005 NFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFA-----QTVMTSR---IV
     300         310       320       330       340                 

             420       430       440       450       460       470 
pF1KB8 GTLAYLPEEYIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEA
       :: ::.  : .. :...  .: .:::::.:: ..:  ::  :  . . : :. ::  .: 
XP_005 GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEH-REPQLLLDIKEEIEDEE
     350       360        370       380       390        400       

             480       490       500       510       520       530 
pF1KB8 GVALRSTQSTLQAGLAADAWAAPIAMQIYKKHLGQLACCCLHRRAKRRPPMTQENSYVSS
           .. .. ..  .  :: .. .      . . ..:  :::.. ..:: . .       
XP_005 ----KTIEDYIDKKMN-DADSTSV------EAMYSVASQCLHEKKNKRPDIKKVQQLLQE
           410        420             430       440       450      

             540       550       560       570       580       590 
pF1KB8 TGRAHSGAAPWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHLTPSCPL
                                                                   
XP_005 MTAS                                                        
        460                                                        




693 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 12:00:11 2016 done: Fri Nov  4 12:00:12 2016
 Total Scan time: 12.650 Total Display time:  0.140

Function used was FASTA [36.3.4 Apr, 2011]
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