Result of FASTA (ccds) for
pFN21AB7721
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7721, 428 aa
1>>>pF1KB7721 428 - 428 aa - 428 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6102+/-0.000938; mu= 15.4694+/- 0.056
mean_var=65.4504+/-13.375, 0's: 0 Z-trim(104.8): 28 B-trim: 443 in 1/49
Lambda= 0.158532
statistics sampled from 8084 (8109) to 8084 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.249), width: 16
Scan time: 2.750
The best scores are: opt bits E(32554)
CCDS4264.1 HDAC3 gene_id:8841|Hs108|chr5 ( 428) 2983 691.3 4.8e-199
CCDS360.1 HDAC1 gene_id:3065|Hs108|chr1 ( 482) 1833 428.3 8.1e-120
CCDS43493.2 HDAC2 gene_id:3066|Hs108|chr6 ( 488) 1833 428.3 8.2e-120
CCDS14420.1 HDAC8 gene_id:55869|Hs108|chrX ( 377) 1048 248.7 7.2e-66
CCDS55449.1 HDAC8 gene_id:55869|Hs108|chrX ( 286) 753 181.2 1.2e-45
CCDS55451.1 HDAC8 gene_id:55869|Hs108|chrX ( 256) 725 174.7 8.9e-44
CCDS55450.1 HDAC8 gene_id:55869|Hs108|chrX ( 146) 312 80.2 1.5e-15
CCDS55452.1 HDAC8 gene_id:55869|Hs108|chrX ( 158) 312 80.2 1.6e-15
CCDS83163.1 HDAC9 gene_id:9734|Hs108|chr7 (1025) 322 82.8 1.7e-15
CCDS47554.1 HDAC9 gene_id:9734|Hs108|chr7 (1066) 322 82.8 1.8e-15
CCDS47553.1 HDAC9 gene_id:9734|Hs108|chr7 (1069) 322 82.8 1.8e-15
CCDS45696.1 HDAC5 gene_id:10014|Hs108|chr17 (1122) 322 82.8 1.8e-15
CCDS32663.1 HDAC5 gene_id:10014|Hs108|chr17 (1123) 322 82.8 1.8e-15
CCDS14306.1 HDAC6 gene_id:10013|Hs108|chrX (1215) 321 82.6 2.3e-15
CCDS47555.1 HDAC9 gene_id:9734|Hs108|chr7 (1011) 318 81.9 3.2e-15
CCDS2529.1 HDAC4 gene_id:9759|Hs108|chr2 (1084) 308 79.6 1.6e-14
CCDS41776.1 HDAC7 gene_id:51564|Hs108|chr12 ( 954) 302 78.2 3.8e-14
CCDS81685.1 HDAC7 gene_id:51564|Hs108|chr12 ( 974) 302 78.2 3.9e-14
CCDS8756.2 HDAC7 gene_id:51564|Hs108|chr12 ( 991) 302 78.2 3.9e-14
CCDS14088.1 HDAC10 gene_id:83933|Hs108|chr22 ( 669) 294 76.3 9.9e-14
CCDS54545.1 HDAC10 gene_id:83933|Hs108|chr22 ( 649) 258 68.1 2.9e-11
>>CCDS4264.1 HDAC3 gene_id:8841|Hs108|chr5 (428 aa)
initn: 2983 init1: 2983 opt: 2983 Z-score: 3686.9 bits: 691.3 E(32554): 4.8e-199
Smith-Waterman score: 2983; 100.0% identity (100.0% similar) in 428 aa overlap (1-428:1-428)
10 20 30 40 50 60
pF1KB7 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 FHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 NQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 NQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 TIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDN
370 380 390 400 410 420
pF1KB7 DKESDVEI
::::::::
CCDS42 DKESDVEI
>>CCDS360.1 HDAC1 gene_id:3065|Hs108|chr1 (482 aa)
initn: 1130 init1: 977 opt: 1833 Z-score: 2264.6 bits: 428.3 E(32554): 8.1e-120
Smith-Waterman score: 1833; 58.8% identity (84.0% similar) in 425 aa overlap (3-421:9-428)
10 20 30 40 50
pF1KB7 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQAS
. : :.:: ::::..:: ::::::::. .::.:.:.::::.:: ...:..:.
CCDS36 MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 QHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQG
..: ..::.::: ::. . : ::. ..:... ::::.::::: ::::::. ::.:. .
CCDS36 AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 ATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHG
:..::.. :::.::::::::::: ::::::::::::..:::::::: ::::::::::::
CCDS36 AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 DGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKH
:::.:::: :::::::::::::.:: :::::. ..:: .:.:: .: ::::::::.::.
CCDS36 DGVEEAFYTTDRVMTVSFHKYGEYF-PGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
190 200 210 220 230
240 250 260 270 280 290
pF1KB7 LFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG
.:.::...:....::. .:::::.:::. ::::::::.:.::..:::.:::::.:.:.::
CCDS36 IFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLG
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 GGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQY
:::::.:::::::::::.. .. : .::::..:::::.::: :: . :. . :::. .:
CCDS36 GGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSN-MTNQNTNEY
300 310 320 330 340 350
360 370 380 390 400
pF1KB7 LDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYS------RPE
:..:.: .::::.:: :::.::.. .: : . . :: .: :.. : :
CCDS36 LEKIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDE---DEDDPDKRISICSSDKRIA
360 370 380 390 400 410
410 420
pF1KB7 APNEFYDGDHDNDKESDVEI
.:: :......
CCDS36 CEEEFSDSEEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGV
420 430 440 450 460 470
>>CCDS43493.2 HDAC2 gene_id:3066|Hs108|chr6 (488 aa)
initn: 1131 init1: 978 opt: 1833 Z-score: 2264.5 bits: 428.3 E(32554): 8.2e-120
Smith-Waterman score: 1833; 58.8% identity (83.8% similar) in 425 aa overlap (3-421:10-429)
10 20 30 40 50
pF1KB7 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQA
: : :.:: :.::..:: ::::::::. .::.:.:.::::.:: ...:..:
CCDS43 MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 SQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQ
. ..: ..::..:: ::. . : ::. ..:... ::::.::::: ::::::. ::.:.
CCDS43 TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 GATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHH
::..:: . :.:.::::::::::: ::::::::::::..:::::::: :::::::::::
CCDS43 GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 GDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYK
::::.:::: :::::::::::::.:: :::::. ..:: .:.:: .: :.::::::.::
CCDS43 GDGVEEAFYTTDRVMTVSFHKYGEYF-PGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYG
190 200 210 220 230
240 250 260 270 280 290
pF1KB7 HLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVL
..:.:.:..:...:::. .:::::::::. ::::::::...::..::: ::.::.:::.:
CCDS43 QIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLML
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB7 GGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQ
::::::.:::::::::::.. .. : .::::..:::::.::: :: . :. . :::. .
CCDS43 GGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSN-MTNQNTPE
300 310 320 330 340 350
360 370 380 390 400
pF1KB7 YLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYS------RP
:...:.: .::::.:: :::.::.. .: : . : :: :.:. :.. : :
CCDS43 YMEKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDE-DGED--PDKRISIRASDKRI
360 370 380 390 400 410
410 420
pF1KB7 EAPNEFYDGDHDNDKESDVEI
.:: :.. ...
CCDS43 ACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKTDVKEEDKSKDNSGEKT
420 430 440 450 460 470
>>CCDS14420.1 HDAC8 gene_id:55869|Hs108|chrX (377 aa)
initn: 1038 init1: 882 opt: 1048 Z-score: 1296.0 bits: 248.7 E(32554): 7.2e-66
Smith-Waterman score: 1048; 43.3% identity (75.1% similar) in 342 aa overlap (26-367:35-374)
10 20 30 40 50
pF1KB7 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQ
:.: ...:::. :.:.:.: . :: ::.
CCDS14 EEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASM
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 HDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGA
..: ::.. :.. ::.:: . . :.. ...: :::. :.:.. . ::.. .:
CCDS14 EEMATFHTDAYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 TQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGD
: . .: .::::.:: ::::: :::::::.:: :.:::.: . :.::.:.:.::::
CCDS14 QCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGD
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 GVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHL
::..:: .:..:::::.::.. :::::::. .:: .:::: .:::..:::.:..: ..
CCDS14 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 FQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGG
. :...: . ..: .::: :::... : . ::.. : :.:..:. .... :.:::
CCDS14 CESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGG
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB7 GGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYL
:::.. :.:::::: :.... ...: :.: :.: ..::..:. : : ..: . .
CCDS14 GGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCR-PDRNEPHRI
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB7 DQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYD
.:: . : :::
CCDS14 QQILNYIKGNLKHVV
370
>>CCDS55449.1 HDAC8 gene_id:55869|Hs108|chrX (286 aa)
initn: 750 init1: 729 opt: 753 Z-score: 933.3 bits: 181.2 E(32554): 1.2e-45
Smith-Waterman score: 753; 45.0% identity (76.9% similar) in 238 aa overlap (130-367:47-283)
100 110 120 130 140 150
pF1KB7 LFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLK
: .::. . :::::::.:: :.:::.: .
CCDS55 VYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRDEASGFCYLNDAVLGILRLRR
20 30 40 50 60 70
160 170 180 190 200 210
pF1KB7 YHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCL
:.::.:.:.::::::..:: .:..:::::.::.. :::::::. .:: .:::: .
CCDS55 KFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSV
80 90 100 110 120 130
220 230 240 250 260 270
pF1KB7 NVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGEC
:::..:::.:..: .. . :...: . ..: .::: :::... : . ::.. : :.:
CCDS55 NVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKC
140 150 160 170 180 190
280 290 300 310 320 330
pF1KB7 VEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLH
..:. .... :.::::::.. :.:::::: :.... ...: :.: :.: ..::..:.
CCDS55 LKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLE
200 210 220 230 240 250
340 350 360 370 380 390
pF1KB7 PDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERG
: : ..: . ..:: . : :::
CCDS55 ITPSCR-PDRNEPHRIQQILNYIKGNLKHVV
260 270 280
>>CCDS55451.1 HDAC8 gene_id:55869|Hs108|chrX (256 aa)
initn: 716 init1: 581 opt: 725 Z-score: 899.4 bits: 174.7 E(32554): 8.9e-44
Smith-Waterman score: 725; 47.6% identity (77.6% similar) in 210 aa overlap (26-235:35-243)
10 20 30 40 50
pF1KB7 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQ
:.: ...:::. :.:.:.: . :: ::.
CCDS55 EEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASM
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 HDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGA
..: ::.. :.. ::.:: . . :.. ...: :::. :.:.. . ::.. .:
CCDS55 EEMATFHTDAYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 TQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGD
: . .: .::::.:: ::::: :::::::.:: :.:::.: . :.::.:.:.::::
CCDS55 QCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGD
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 GVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHL
::..:: .:..:::::.::.. :::::::. .:: .:::: .:::..:::.:..: ..
CCDS55 GVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 FQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGG
CCDS55 CERYEPPAPNPGL
250
>>CCDS55450.1 HDAC8 gene_id:55869|Hs108|chrX (146 aa)
initn: 313 init1: 178 opt: 312 Z-score: 392.8 bits: 80.2 E(32554): 1.5e-15
Smith-Waterman score: 312; 38.9% identity (70.8% similar) in 113 aa overlap (26-138:35-146)
10 20 30 40 50
pF1KB7 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQ
:.: ...:::. :.:.:.: . :: ::.
CCDS55 EEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASM
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 HDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGA
..: ::.. :.. ::.:: . . :.. ...: :::. :.:.. . ::.. .:
CCDS55 EEMATFHTDAYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 TQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGD
: . .: .::::.:: :::::
CCDS55 QCLIDGMCKVAINWSGGWHHAKK
130 140
>>CCDS55452.1 HDAC8 gene_id:55869|Hs108|chrX (158 aa)
initn: 313 init1: 178 opt: 312 Z-score: 392.3 bits: 80.2 E(32554): 1.6e-15
Smith-Waterman score: 312; 38.9% identity (70.8% similar) in 113 aa overlap (26-138:35-146)
10 20 30 40 50
pF1KB7 MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQ
:.: ...:::. :.:.:.: . :: ::.
CCDS55 EEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASM
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 HDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGA
..: ::.. :.. ::.:: . . :.. ...: :::. :.:.. . ::.. .:
CCDS55 EEMATFHTDAYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 TQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGD
: . .: .::::.:: :::::
CCDS55 QCLIDGMCKVAINWSGGWHHAKKETCVYVALYKAF
130 140 150
>>CCDS83163.1 HDAC9 gene_id:9734|Hs108|chr7 (1025 aa)
initn: 245 init1: 105 opt: 322 Z-score: 391.7 bits: 82.8 E(32554): 1.7e-15
Smith-Waterman score: 333; 25.8% identity (54.4% similar) in 388 aa overlap (9-359:596-971)
10 20 30
pF1KB7 MAKTVAYFYDPDVGNFHYGAG----HPMKPHRLALTHS
::: . . . : :: . :. :
CCDS83 SRTHSSPAASVLPHPAMDRPLQPGSATGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWS
570 580 590 600 610 620
40 50 60 70 80 90
pF1KB7 LVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDC
. . :: .: .. .:: ... ::: . ..: ..: . : . . .:::
CCDS83 RLQETGLLNKCERIQGRKASLEEIQLVHSEHH-SLLYGTNPLDGQKLDPRIL---LGDDS
630 640 650 660 670 680
100 110 120 130
pF1KB7 PVF----P-GLFEFCSRYTGASLQ--GATQLN-NKICDIAINWAGGL------------H
: : : . : :. ::... . . ..: . :.: :
CCDS83 QKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGH
690 700 710 720 730 740
140 150 160 170 180 190
pF1KB7 HAKKFEASGFCYVNDIVIGILELLKYH---PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS
::.. : :::. :...: . :. . ..: .:.:.:::.:.:.::: .. .:
CCDS83 HAEESTAMGFCFFNSVAI-TAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS
750 760 770 780 790 800
200 210 220 230 240
pF1KB7 FHKY--GNYFFPGTGDMYEVGAESGRYYCLNVPLRDGID----DQSYKHLFQPVINQVVD
.:.: :: ::::.: :::. :. : .:. :.: : : . :. ... :.
CCDS83 LHRYDEGN-FFPGSGAPNEVGTGLGEGYNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAK
810 820 830 840 850
250 260 270 280 290 300
pF1KB7 FYQPTCIVLQCGADSL-G-CDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG-GGGYTVRN
..: .... : :.: : :: .... . :. .. . .. .::. ::. .
CCDS83 EFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLTKQLMTLADGRVVLALEGGHDLTA
860 870 880 890 900 910
310 320 330 340 350 360
pF1KB7 VARCWTYETSLLVEEAISEEL-PYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQT
. : . :. :. ...:: : .: . . .:... ... :: :. .: ..:
CCDS83 I--CDASEAC--VNALLGNELEPLAEDILHQSPNMNAVISLQKIIEIQS--KYWKSVRMV
920 930 940 950 960 970
370 380 390 400 410 420
pF1KB7 IFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDND
CCDS83 AVPRGCALAGAQLQEETETVSALASLTVDVEQPFAQEDSRTAGEPMEEEPAL
980 990 1000 1010 1020
>>CCDS47554.1 HDAC9 gene_id:9734|Hs108|chr7 (1066 aa)
initn: 245 init1: 105 opt: 322 Z-score: 391.4 bits: 82.8 E(32554): 1.8e-15
Smith-Waterman score: 333; 25.8% identity (54.4% similar) in 388 aa overlap (9-359:637-1012)
10 20 30
pF1KB7 MAKTVAYFYDPDVGNFHYGAG----HPMKPHRLALTHS
::: . . . : :: . :. :
CCDS47 SRTHSSPAASVLPHPAMDRPLQPGSATGIAYDPLMLKHQCVCGNSTTHPEHAGRIQSIWS
610 620 630 640 650 660
40 50 60 70 80 90
pF1KB7 LVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDC
. . :: .: .. .:: ... ::: . ..: ..: . : . . .:::
CCDS47 RLQETGLLNKCERIQGRKASLEEIQLVHSEHH-SLLYGTNPLDGQKLDPRIL---LGDDS
670 680 690 700 710 720
100 110 120 130
pF1KB7 PVF----P-GLFEFCSRYTGASLQ--GATQLN-NKICDIAINWAGGL------------H
: : : . : :. ::... . . ..: . :.: :
CCDS47 QKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNGFAVVRPPGH
730 740 750 760 770 780
140 150 160 170 180 190
pF1KB7 HAKKFEASGFCYVNDIVIGILELLKYH---PRVLYIDIDIHHGDGVQEAFYLTDRVMTVS
::.. : :::. :...: . :. . ..: .:.:.:::.:.:.::: .. .:
CCDS47 HAEESTAMGFCFFNSVAI-TAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS
790 800 810 820 830 840
200 210 220 230 240
pF1KB7 FHKY--GNYFFPGTGDMYEVGAESGRYYCLNVPLRDGID----DQSYKHLFQPVINQVVD
.:.: :: ::::.: :::. :. : .:. :.: : : . :. ... :.
CCDS47 LHRYDEGN-FFPGSGAPNEVGTGLGEGYNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAK
850 860 870 880 890 900
250 260 270 280 290 300
pF1KB7 FYQPTCIVLQCGADSL-G-CDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG-GGGYTVRN
..: .... : :.: : :: .... . :. .. . .. .::. ::. .
CCDS47 EFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLTKQLMTLADGRVVLALEGGHDLTA
910 920 930 940 950 960
310 320 330 340 350 360
pF1KB7 VARCWTYETSLLVEEAISEEL-PYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQT
. : . :. :. ...:: : .: . . .:... ... :: :. .: ..:
CCDS47 I--CDASEAC--VNALLGNELEPLAEDILHQSPNMNAVISLQKIIEIQS--KYWKSVRMV
970 980 990 1000 1010
370 380 390 400 410 420
pF1KB7 IFENLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENYSRPEAPNEFYDGDHDND
CCDS47 AVPRGCALAGAQLQEETETVSALASLTVDVEQPFAQEDSRTAGEPMEEEPAL
1020 1030 1040 1050 1060
428 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:15:57 2016 done: Fri Nov 4 09:15:57 2016
Total Scan time: 2.750 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]