Result of FASTA (ccds) for pFN21AB7271
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7271, 495 aa
  1>>>pF1KB7271 495 - 495 aa - 495 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.6619+/-0.00109; mu= -6.1679+/- 0.064
 mean_var=407.9670+/-93.251, 0's: 0 Z-trim(113.9): 646  B-trim: 0 in 0/53
 Lambda= 0.063498
 statistics sampled from 13672 (14454) to 13672 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.768), E-opt: 0.2 (0.444), width:  16
 Scan time:  3.840

The best scores are:                                      opt bits E(32554)
CCDS54333.1 KLF11 gene_id:8462|Hs108|chr2          ( 495) 3399 325.8 6.8e-89
CCDS1668.1 KLF11 gene_id:8462|Hs108|chr2           ( 512) 3399 325.8 6.9e-89
CCDS6294.1 KLF10 gene_id:7071|Hs108|chr8           ( 480)  907 97.5 3.5e-20
CCDS47905.1 KLF10 gene_id:7071|Hs108|chr8          ( 469)  904 97.2 4.2e-20


>>CCDS54333.1 KLF11 gene_id:8462|Hs108|chr2               (495 aa)
 initn: 3399 init1: 3399 opt: 3399  Z-score: 1709.5  bits: 325.8 E(32554): 6.8e-89
Smith-Waterman score: 3399; 100.0% identity (100.0% similar) in 495 aa overlap (1-495:1-495)

               10        20        30        40        50        60
pF1KB7 MDICESILERKRHDSERSTCSILEQTDMEAVEALVCMSSWGQRSQKGDLLRIRPLTPVSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MDICESILERKRHDSERSTCSILEQTDMEAVEALVCMSSWGQRSQKGDLLRIRPLTPVSD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 SGDVTTTVHMDAATPELPKDFHSLSTLCITPPQSPDLVEPSTRTPVSPQVTDSKACTATD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SGDVTTTVHMDAATPELPKDFHSLSTLCITPPQSPDLVEPSTRTPVSPQVTDSKACTATD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 VLQSSAVVARALSGGAERGLLGLEPVPSSPCRAKGTSVIRHTGESPAACFPTIQTPDCRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VLQSSAVVARALSGGAERGLLGLEPVPSSPCRAKGTSVIRHTGESPAACFPTIQTPDCRL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 SDSREGEEQLLGHFETLQDTHLTDSLLSTNLVSCQPCLHKSGGLLLTDKGQQAGWPGAVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SDSREGEEQLLGHFETLQDTHLTDSLLSTNLVSCQPCLHKSGGLLLTDKGQQAGWPGAVQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 TCSPKNYENDLPRKTTPLISVSVPAPPVLCQMIPVTGQSSMLPAFLKPPPQLSVGTVRPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TCSPKNYENDLPRKTTPLISVSVPAPPVLCQMIPVTGQSSMLPAFLKPPPQLSVGTVRPI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 LAQAAPAPQPVFVGPAVPQGAVMLVLPQGALPPPAPCAANVMAAGNTKLLPLAPAPVFIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LAQAAPAPQPVFVGPAVPQGAVMLVLPQGALPPPAPCAANVMAAGNTKLLPLAPAPVFIT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 SSQNCVPQVDFSRRRNYVCSFPGCRKTYFKSSHLKAHLRTHTGEKPFNCSWDGCDKKFAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SSQNCVPQVDFSRRRNYVCSFPGCRKTYFKSSHLKAHLRTHTGEKPFNCSWDGCDKKFAR
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB7 SDELSRHRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTKKIPGWQAEVGKLNRIAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SDELSRHRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTKKIPGWQAEVGKLNRIAS
              430       440       450       460       470       480

              490     
pF1KB7 AESPGSPLVSMPASA
       :::::::::::::::
CCDS54 AESPGSPLVSMPASA
              490     

>>CCDS1668.1 KLF11 gene_id:8462|Hs108|chr2                (512 aa)
 initn: 3399 init1: 3399 opt: 3399  Z-score: 1709.3  bits: 325.8 E(32554): 6.9e-89
Smith-Waterman score: 3399; 100.0% identity (100.0% similar) in 495 aa overlap (1-495:18-512)

                                10        20        30        40   
pF1KB7                  MDICESILERKRHDSERSTCSILEQTDMEAVEALVCMSSWGQR
                        :::::::::::::::::::::::::::::::::::::::::::
CCDS16 MHTPDFAGPDDARAVDIMDICESILERKRHDSERSTCSILEQTDMEAVEALVCMSSWGQR
               10        20        30        40        50        60

            50        60        70        80        90       100   
pF1KB7 SQKGDLLRIRPLTPVSDSGDVTTTVHMDAATPELPKDFHSLSTLCITPPQSPDLVEPSTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 SQKGDLLRIRPLTPVSDSGDVTTTVHMDAATPELPKDFHSLSTLCITPPQSPDLVEPSTR
               70        80        90       100       110       120

           110       120       130       140       150       160   
pF1KB7 TPVSPQVTDSKACTATDVLQSSAVVARALSGGAERGLLGLEPVPSSPCRAKGTSVIRHTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 TPVSPQVTDSKACTATDVLQSSAVVARALSGGAERGLLGLEPVPSSPCRAKGTSVIRHTG
              130       140       150       160       170       180

           170       180       190       200       210       220   
pF1KB7 ESPAACFPTIQTPDCRLSDSREGEEQLLGHFETLQDTHLTDSLLSTNLVSCQPCLHKSGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 ESPAACFPTIQTPDCRLSDSREGEEQLLGHFETLQDTHLTDSLLSTNLVSCQPCLHKSGG
              190       200       210       220       230       240

           230       240       250       260       270       280   
pF1KB7 LLLTDKGQQAGWPGAVQTCSPKNYENDLPRKTTPLISVSVPAPPVLCQMIPVTGQSSMLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 LLLTDKGQQAGWPGAVQTCSPKNYENDLPRKTTPLISVSVPAPPVLCQMIPVTGQSSMLP
              250       260       270       280       290       300

           290       300       310       320       330       340   
pF1KB7 AFLKPPPQLSVGTVRPILAQAAPAPQPVFVGPAVPQGAVMLVLPQGALPPPAPCAANVMA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 AFLKPPPQLSVGTVRPILAQAAPAPQPVFVGPAVPQGAVMLVLPQGALPPPAPCAANVMA
              310       320       330       340       350       360

           350       360       370       380       390       400   
pF1KB7 AGNTKLLPLAPAPVFITSSQNCVPQVDFSRRRNYVCSFPGCRKTYFKSSHLKAHLRTHTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 AGNTKLLPLAPAPVFITSSQNCVPQVDFSRRRNYVCSFPGCRKTYFKSSHLKAHLRTHTG
              370       380       390       400       410       420

           410       420       430       440       450       460   
pF1KB7 EKPFNCSWDGCDKKFARSDELSRHRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS16 EKPFNCSWDGCDKKFARSDELSRHRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTK
              430       440       450       460       470       480

           470       480       490     
pF1KB7 KIPGWQAEVGKLNRIASAESPGSPLVSMPASA
       ::::::::::::::::::::::::::::::::
CCDS16 KIPGWQAEVGKLNRIASAESPGSPLVSMPASA
              490       500       510  

>>CCDS6294.1 KLF10 gene_id:7071|Hs108|chr8                (480 aa)
 initn: 942 init1: 740 opt: 907  Z-score: 475.8  bits: 97.5 E(32554): 3.5e-20
Smith-Waterman score: 1046; 40.6% identity (61.8% similar) in 495 aa overlap (5-484:17-476)

                           10        20        30         40       
pF1KB7             MDICESILERKRHDSERSTCSILEQTDMEAVEALVCMS-SWGQRSQKG
                       : : :: . .:  :  .  :..:.::::::. :: :: .  .: 
CCDS62 MLNFGASLQQTAEERMEMISERPK-ESMYSWNKTAEKSDFEAVEALMSMSCSWKSDFKK-
               10        20         30        40        50         

        50        60        70        80        90       100       
pF1KB7 DLLRIRPLTPVSDSGDVTTTVHMDAATPELPKDFHSLSTLCITPPQSPDLVEPSTRTPVS
         .. ::.:::::   ..   ..  .::    :::.. ..:.::: ::.  :::    ::
CCDS62 -YVENRPVTPVSD---LSEEENLLPGTP----DFHTIPAFCLTPPYSPSDFEPSQ---VS
        60        70           80            90       100          

       110       120       130       140         150       160     
pF1KB7 PQVTDSKACTATDVLQSSAVVARALSGGAERGLLGLEPV--PSSPCRAKGTSVIRHTGES
         .. . . .    :...:    :     :.      ::  :. : .:..:::::::...
CCDS62 NLMAPAPSTVHFKSLSDTAKPHIAAPFKEEEK----SPVSAPKLP-KAQATSVIRHTADA
       110       120       130           140        150       160  

         170       180       190        200       210       220    
pF1KB7 PAACFPTIQTPDCRLSDSREGEEQLLGHFET-LQDTHLTDSLLSTNLVSCQPCLHKSGGL
             :       . . ...  .   :...     ..  . .: :  .:.    ..   
CCDS62 QLCNHQTCPMKAASILNYQNNSFRRRTHLNVEAARKNIPCAAVSPNRSKCE----RNTVA
            170       180       190       200       210            

          230       240            250       260             270   
pF1KB7 LLTDKGQQAGWPGAVQT-----CSPKNYENDLPRKTTPLIS---VS---VPAPPVLCQMI
        . .:.. : .  .: .     :  .    . :.. . :.:   ::   ::  ::.:::.
CCDS62 DVDEKASAALYDFSVPSSETVICRSQPAPVS-PQQKSVLVSPPAVSAGGVPPMPVICQMV
      220       230       240        250       260       270       

           280       290       300       310       320       330   
pF1KB7 PVTGQSSMLPAFLKPPPQLSVGTVRPILAQAAPAPQPVFVGPAVPQGAVMLVLPQGALPP
       :       :::  . :   .:    :     :  :  ::.:  ::.::::.:.:: ..  
CCDS62 P-------LPA--NNPVVTTVVPSTPPSQPPAVCPPVVFMGTQVPKGAVMFVVPQPVVQS
              280         290       300       310       320        

           340       350       360       370       380       390   
pF1KB7 PAPCAANVMAAGNTKLLPLAPAPVFITSSQNCVPQVDFSRRRNYVCSFPGCRKTYFKSSH
         :    :.. ..:.: :.:::: :  :. . .::.: :: :...:: ::: ::::::::
CCDS62 SKP---PVVSPNGTRLSPIAPAPGFSPSAAKVTPQIDSSRIRSHICSHPGCGKTYFKSSH
      330          340       350       360       370       380     

           400       410       420       430       440       450   
pF1KB7 LKAHLRTHTGEKPFNCSWDGCDKKFARSDELSRHRRTHTGEKKFVCPVCDRRFMRSDHLT
       :::: :::::::::.::: ::...::::::::::::::::::::.::.::::::::::::
CCDS62 LKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTHTGEKKFACPMCDRRFMRSDHLT
         390       400       410       420       430       440     

           460       470       480       490     
pF1KB7 KHARRHMTTKKIPGWQAEVGKLNRIASAESPGSPLVSMPASA
       ::::::...::.:.:: ::.::: ::   .:           
CCDS62 KHARRHLSAKKLPNWQMEVSKLNDIALPPTPAPTQ       
         450       460       470       480       

>>CCDS47905.1 KLF10 gene_id:7071|Hs108|chr8               (469 aa)
 initn: 942 init1: 740 opt: 904  Z-score: 474.5  bits: 97.2 E(32554): 4.2e-20
Smith-Waterman score: 1046; 40.6% identity (61.8% similar) in 495 aa overlap (5-484:6-465)

                10        20        30         40        50        
pF1KB7  MDICESILERKRHDSERSTCSILEQTDMEAVEALVCMS-SWGQRSQKGDLLRIRPLTPV
            : : :: . .:  :  .  :..:.::::::. :: :: .  .:   .. ::.:::
CCDS47 MEERMEMISERPK-ESMYSWNKTAEKSDFEAVEALMSMSCSWKSDFKK--YVENRPVTPV
               10         20        30        40          50       

       60        70        80        90       100       110        
pF1KB7 SDSGDVTTTVHMDAATPELPKDFHSLSTLCITPPQSPDLVEPSTRTPVSPQVTDSKACTA
       ::   ..   ..  .::    :::.. ..:.::: ::.  :::    ::  .. . . . 
CCDS47 SD---LSEEENLLPGTP----DFHTIPAFCLTPPYSPSDFEPSQ---VSNLMAPAPSTVH
           60        70            80        90          100       

      120       130       140         150       160       170      
pF1KB7 TDVLQSSAVVARALSGGAERGLLGLEPV--PSSPCRAKGTSVIRHTGESPAACFPTIQTP
          :...:    :     :.      ::  :. : .:..:::::::...      :    
CCDS47 FKSLSDTAKPHIAAPFKEEEK----SPVSAPKLP-KAQATSVIRHTADAQLCNHQTCPMK
       110       120           130        140       150       160  

        180       190        200       210       220       230     
pF1KB7 DCRLSDSREGEEQLLGHFET-LQDTHLTDSLLSTNLVSCQPCLHKSGGLLLTDKGQQAGW
          . . ...  .   :...     ..  . .: :  .:.    ..    . .:.. : .
CCDS47 AASILNYQNNSFRRRTHLNVEAARKNIPCAAVSPNRSKCE----RNTVADVDEKASAALY
            170       180       190       200           210        

         240            250       260             270       280    
pF1KB7 PGAVQT-----CSPKNYENDLPRKTTPLIS---VS---VPAPPVLCQMIPVTGQSSMLPA
         .: .     :  .    . :.. . :.:   ::   ::  ::.:::.:       :::
CCDS47 DFSVPSSETVICRSQPAPVS-PQQKSVLVSPPAVSAGGVPPMPVICQMVP-------LPA
      220       230        240       250       260              270

          290       300       310       320       330       340    
pF1KB7 FLKPPPQLSVGTVRPILAQAAPAPQPVFVGPAVPQGAVMLVLPQGALPPPAPCAANVMAA
         . :   .:    :     :  :  ::.:  ::.::::.:.:: ..    :    :.. 
CCDS47 --NNPVVTTVVPSTPPSQPPAVCPPVVFMGTQVPKGAVMFVVPQPVVQSSKP---PVVSP
                280       290       300       310       320        

          350       360       370       380       390       400    
pF1KB7 GNTKLLPLAPAPVFITSSQNCVPQVDFSRRRNYVCSFPGCRKTYFKSSHLKAHLRTHTGE
       ..:.: :.:::: :  :. . .::.: :: :...:: ::: :::::::::::: ::::::
CCDS47 NGTRLSPIAPAPGFSPSAAKVTPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGE
         330       340       350       360       370       380     

          410       420       430       440       450       460    
pF1KB7 KPFNCSWDGCDKKFARSDELSRHRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTKK
       :::.::: ::...::::::::::::::::::::.::.::::::::::::::::::...::
CCDS47 KPFSCSWKGCERRFARSDELSRHRRTHTGEKKFACPMCDRRFMRSDHLTKHARRHLSAKK
         390       400       410       420       430       440     

          470       480       490     
pF1KB7 IPGWQAEVGKLNRIASAESPGSPLVSMPASA
       .:.:: ::.::: ::   .:           
CCDS47 LPNWQMEVSKLNDIALPPTPAPTQ       
         450       460                




495 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 06:31:48 2016 done: Fri Nov  4 06:31:49 2016
 Total Scan time:  3.840 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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