Result of FASTA (omim) for
pFN21AB7186
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7186, 437 aa
1>>>pF1KB7186 437 - 437 aa - 437 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6453+/-0.000317; mu= 13.0853+/- 0.020
mean_var=129.8534+/-25.879, 0's: 0 Z-trim(120.5): 18 B-trim: 718 in 1/58
Lambda= 0.112551
statistics sampled from 35835 (35853) to 35835 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.42), width: 16
Scan time: 10.310
The best scores are: opt bits E(85289)
NP_003107 (OMIM: 603038) sperm-associated antigen ( 437) 2951 490.1 4.7e-138
XP_011527311 (OMIM: 603038) PREDICTED: sperm-assoc ( 393) 2274 380.1 5.4e-105
XP_005260577 (OMIM: 603038) PREDICTED: sperm-assoc ( 344) 2254 376.8 4.6e-104
NP_001304860 (OMIM: 603038) sperm-associated antig ( 360) 2252 376.5 6e-104
NP_542406 (OMIM: 613942) SUN domain-containing pro ( 379) 770 135.9 1.7e-31
XP_011526877 (OMIM: 613942) PREDICTED: SUN domain- ( 289) 762 134.5 3.4e-31
XP_011526876 (OMIM: 613942) PREDICTED: SUN domain- ( 354) 763 134.8 3.6e-31
XP_011526875 (OMIM: 613942) PREDICTED: SUN domain- ( 402) 763 134.8 3.9e-31
XP_011528406 (OMIM: 613569) PREDICTED: SUN domain- ( 671) 543 99.3 3.3e-20
XP_011528407 (OMIM: 613569) PREDICTED: SUN domain- ( 706) 543 99.3 3.4e-20
NP_056189 (OMIM: 613569) SUN domain-containing pro ( 717) 543 99.3 3.4e-20
NP_001186509 (OMIM: 613569) SUN domain-containing ( 717) 543 99.3 3.4e-20
NP_001186508 (OMIM: 613569) SUN domain-containing ( 738) 543 99.3 3.5e-20
NP_001165415 (OMIM: 607723) SUN domain-containing ( 682) 490 90.7 1.3e-17
NP_079430 (OMIM: 607723) SUN domain-containing pro ( 702) 490 90.7 1.3e-17
NP_001124437 (OMIM: 607723) SUN domain-containing ( 785) 490 90.7 1.4e-17
XP_016884237 (OMIM: 613569) PREDICTED: SUN domain- ( 683) 410 77.7 1.1e-13
>>NP_003107 (OMIM: 603038) sperm-associated antigen 4 pr (437 aa)
initn: 2951 init1: 2951 opt: 2951 Z-score: 2599.5 bits: 490.1 E(85289): 4.7e-138
Smith-Waterman score: 2951; 100.0% identity (100.0% similar) in 437 aa overlap (1-437:1-437)
10 20 30 40 50 60
pF1KB7 MRRSSRPGSASSSRKHTPNFFSENSSMSITSEDSKGLRSAEPGPGEPEGRRARGPSCGEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MRRSSRPGSASSSRKHTPNFFSENSSMSITSEDSKGLRSAEPGPGEPEGRRARGPSCGEP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 ALSAGVPGGTTWAGSSQQKPAPRSHNWQTACGAATVRGGASEPTGSPVVSEEPLDLLPTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ALSAGVPGGTTWAGSSQQKPAPRSHNWQTACGAATVRGGASEPTGSPVVSEEPLDLLPTL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DLRQEMPPPRVFKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DLRQEMPPPRVFKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 FWLGLLYLVSPLENEPKEMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FWLGLLYLVSPLENEPKEMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 VAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 ILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 LQVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LQVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRA
370 380 390 400 410 420
430
pF1KB7 HGVRTSEGAEGSAQGPH
:::::::::::::::::
NP_003 HGVRTSEGAEGSAQGPH
430
>>XP_011527311 (OMIM: 603038) PREDICTED: sperm-associate (393 aa)
initn: 2267 init1: 2267 opt: 2274 Z-score: 2006.0 bits: 380.1 E(85289): 5.4e-105
Smith-Waterman score: 2542; 89.9% identity (89.9% similar) in 437 aa overlap (1-437:1-393)
10 20 30 40 50 60
pF1KB7 MRRSSRPGSASSSRKHTPNFFSENSSMSITSEDSKGLRSAEPGPGEPEGRRARGPSCGEP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRRSSRPGSASSSRKHTPNFFSENSSMSITSEDSKGLRSAEPGPGEPEGRRARGPSC---
10 20 30 40 50
70 80 90 100 110 120
pF1KB7 ALSAGVPGGTTWAGSSQQKPAPRSHNWQTACGAATVRGGASEPTGSPVVSEEPLDLLPTL
:::::::::::::::::::
XP_011 -----------------------------------------EPTGSPVVSEEPLDLLPTL
60 70
130 140 150 160 170 180
pF1KB7 DLRQEMPPPRVFKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLRQEMPPPRVFKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSA
80 90 100 110 120 130
190 200 210 220 230 240
pF1KB7 FWLGLLYLVSPLENEPKEMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FWLGLLYLVSPLENEPKEMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSER
140 150 160 170 180 190
250 260 270 280 290 300
pF1KB7 VAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTV
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB7 ILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFG
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB7 LQVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRA
320 330 340 350 360 370
430
pF1KB7 HGVRTSEGAEGSAQGPH
:::::::::::::::::
XP_011 HGVRTSEGAEGSAQGPH
380 390
>>XP_005260577 (OMIM: 603038) PREDICTED: sperm-associate (344 aa)
initn: 2254 init1: 2254 opt: 2254 Z-score: 1989.2 bits: 376.8 E(85289): 4.6e-104
Smith-Waterman score: 2254; 100.0% identity (100.0% similar) in 336 aa overlap (102-437:9-344)
80 90 100 110 120 130
pF1KB7 WAGSSQQKPAPRSHNWQTACGAATVRGGASEPTGSPVVSEEPLDLLPTLDLRQEMPPPRV
::::::::::::::::::::::::::::::
XP_005 MISGHLLQEPTGSPVVSEEPLDLLPTLDLRQEMPPPRV
10 20 30
140 150 160 170 180 190
pF1KB7 FKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSAFWLGLLYLVSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSAFWLGLLYLVSP
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB7 LENEPKEMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSERVAKLVFQRLNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LENEPKEMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSERVAKLVFQRLNE
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB7 DFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTVILEPHVFPGNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTVILEPHVFPGNC
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB7 WAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFGLQVYDETEVSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFGLQVYDETEVSL
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB7 GKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRAHGVRTSEGAEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRAHGVRTSEGAEG
280 290 300 310 320 330
pF1KB7 SAQGPH
::::::
XP_005 SAQGPH
340
>>NP_001304860 (OMIM: 603038) sperm-associated antigen 4 (360 aa)
initn: 2251 init1: 2251 opt: 2252 Z-score: 1987.2 bits: 376.5 E(85289): 6e-104
Smith-Waterman score: 2252; 98.8% identity (99.4% similar) in 341 aa overlap (97-437:22-360)
70 80 90 100 110 120
pF1KB7 PGGTTWAGSSQQKPAPRSHNWQTACGAATVRGGASEPTGSPVVSEEPLDLLPTLDLRQEM
:: ..::::::::::::::::::::::::
NP_001 MGRKLSAEASASEPQLADSLWRG--NQPTGSPVVSEEPLDLLPTLDLRQEM
10 20 30 40
130 140 150 160 170 180
pF1KB7 PPPRVFKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSAFWLGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPPRVFKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSAFWLGLL
50 60 70 80 90 100
190 200 210 220 230 240
pF1KB7 YLVSPLENEPKEMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSERVAKLVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YLVSPLENEPKEMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSERVAKLVF
110 120 130 140 150 160
250 260 270 280 290 300
pF1KB7 QRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTVILEPHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTVILEPHV
170 180 190 200 210 220
310 320 330 340 350 360
pF1KB7 FPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFGLQVYDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFGLQVYDE
230 240 250 260 270 280
370 380 390 400 410 420
pF1KB7 TEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRAHGVRTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRAHGVRTS
290 300 310 320 330 340
430
pF1KB7 EGAEGSAQGPH
:::::::::::
NP_001 EGAEGSAQGPH
350 360
>>NP_542406 (OMIM: 613942) SUN domain-containing protein (379 aa)
initn: 657 init1: 479 opt: 770 Z-score: 686.4 bits: 135.9 E(85289): 1.7e-31
Smith-Waterman score: 770; 37.1% identity (64.9% similar) in 385 aa overlap (63-437:7-375)
40 50 60 70 80 90
pF1KB7 DSKGLRSAEPGPGEPEGRRARGPSCGEPALSAGVPGGTTWAGSSQQKPAPRSHNWQTACG
: : ::. . ..: :: . :
NP_542 MPRSSRSPGDPGALL--EDVAHNPRPRRIAQR---G
10 20 30
100 110 120 130 140 150
pF1KB7 AATVRGGASEPTGSPVVSEEPLDLLPTLDLRQEMPPPRVFKSFLSLLFQGLSVLLSLAGD
: : .: : :: .... : ::. . : . . . . .: . : . : .
NP_542 RNTSR--MAEDT-SPNMNDNIL--LPVRNNDQALGLTQCMLGCVSWFTCFACSLRTQAQQ
40 50 60 70 80
160 170 180 190 200
pF1KB7 VLVSMYRE--VCSIRFLFTAVSLLSLFLSAFWLGLLYLVSPLE-------NEPKEMLTLS
:: . : .:. . :.. :: : .::. ..: : .. : : . : :
NP_542 VLFNTCRCKLLCQKLMEKTGILLLCAF--GFWMFSIHLPSKMKVWQDDSINGPLQSLRL-
90 100 110 120 130 140
210 220 230 240 250 260
pF1KB7 EYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSE-RVAKLVFQRLNEDFVRKPDYALS
:.:.:: .. ..:.:.. ...: ... ..: ..: ..:. ... .. :...:::.::.
NP_542 -YQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMAQKIMKMIHGDYIEKPDFALK
150 160 170 180 190 200
270 280 290 300 310 320
pF1KB7 SVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTVILEPHVFPGNCWAFEGDQGQVV
:.:::::...:: : ... .:: ...::::.:: :::::.: ::::::::::.:::.
NP_542 SIGASIDFEHTSVTYNHEKAHSYWNWIQLWNYAQPPDVILEPNVTPGNCWAFEGDRGQVT
210 220 230 240 250 260
330 340 350 360 370 380
pF1KB7 IQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFGLQVYDETEVSLGKFTFDVEKSE
::: .: ::..:::: : .. .:. ..::.::...:.. . :: :: : :. :.
NP_542 IQLAQKVYLSNLTLQHIPKTISLSGSLDTAPKDFVIYGMEGSPKEEVFLGAFQFQPENI-
270 280 290 300 310 320
390 400 410 420 430
pF1KB7 IQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRAHGVRTSEGAEGSAQGPH
:: : :::.: :: ::..: ::::.: ::::::::.:: .. : :.:.
NP_542 IQMFPLQNQPARAFSAVKVKISSNWGNPGFTCLYRVRVHG-SVAPPREQPHQNPYPKRD
330 340 350 360 370
>>XP_011526877 (OMIM: 613942) PREDICTED: SUN domain-cont (289 aa)
initn: 657 init1: 479 opt: 762 Z-score: 680.9 bits: 134.5 E(85289): 3.4e-31
Smith-Waterman score: 762; 41.8% identity (71.9% similar) in 285 aa overlap (161-437:7-285)
140 150 160 170 180 190
pF1KB7 VFKSFLSLLFQGLSVLLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSAFWLGLLYLVS
.:. . :.. :: : .::. ..: :
XP_011 MCVCKLLCQKLMEKTGILLLCAF--GFWMFSIHLPS
10 20 30
200 210 220 230 240
pF1KB7 PLE-------NEPKEMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSE-RVA
.. : : . : : :.:.:: .. ..:.:.. ...: ... ..: ..: ..:
XP_011 KMKVWQDDSINGPLQSLRL--YQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMA
40 50 60 70 80 90
250 260 270 280 290 300
pF1KB7 KLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTVIL
. ... .. :...:::.::.:.:::::...:: : ... .:: ...::::.:: :::
XP_011 QKIMKMIHGDYIEKPDFALKSIGASIDFEHTSVTYNHEKAHSYWNWIQLWNYAQPPDVIL
100 110 120 130 140 150
310 320 330 340 350 360
pF1KB7 EPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFGLQ
::.: ::::::::::.:::.::: .: ::..:::: : .. .:. ..::.::...:..
XP_011 EPNVTPGNCWAFEGDRGQVTIQLAQKVYLSNLTLQHIPKTISLSGSLDTAPKDFVIYGME
160 170 180 190 200 210
370 380 390 400 410 420
pF1KB7 VYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRAHG
. :: :: : :. :. :: : :::.: :: ::..: ::::.: ::::::::.::
XP_011 GSPKEEVFLGAFQFQPENI-IQMFPLQNQPARAFSAVKVKISSNWGNPGFTCLYRVRVHG
220 230 240 250 260 270
430
pF1KB7 VRTSEGAEGSAQGPH
.. : :.:.
XP_011 -SVAPPREQPHQNPYPKRD
280
>>XP_011526876 (OMIM: 613942) PREDICTED: SUN domain-cont (354 aa)
initn: 657 init1: 479 opt: 763 Z-score: 680.6 bits: 134.8 E(85289): 3.6e-31
Smith-Waterman score: 763; 41.1% identity (70.5% similar) in 302 aa overlap (146-437:55-350)
120 130 140 150 160 170
pF1KB7 LLPTLDLRQEMPPPRVFKSFLSLLFQGLSVLLSLAGDVLVSMYRE--VCSIRFLFTAVSL
: . : .:: . : .:. . :.. :
XP_011 RRIAQRGRNTSRMAEDTSPNMTWFTCFACSLRTQAQQVLFNTCRCKLLCQKLMEKTGILL
30 40 50 60 70 80
180 190 200 210 220
pF1KB7 LSLFLSAFWLGLLYLVSPLE-------NEPKEMLTLSEYHERVRSQGQQLQQLQAELDKL
: : .::. ..: : .. : : . : : :.:.:: .. ..:.:.. ...:
XP_011 LCAF--GFWMFSIHLPSKMKVWQDDSINGPLQSLRL--YQEKVRHHSGEIQDLRGSMNQL
90 100 110 120 130 140
230 240 250 260 270 280
pF1KB7 HKEVSTVRAANSE-RVAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYF
... ..: ..: ..:. ... .. :...:::.::.:.:::::...:: : ... .
XP_011 IAKLQEMEAMSDEQKMAQKIMKMIHGDYIEKPDFALKSIGASIDFEHTSVTYNHEKAHSY
150 160 170 180 190 200
290 300 310 320 330 340
pF1KB7 WNRFSFWNYARPPTVILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEH
:: ...::::.:: :::::.: ::::::::::.:::.::: .: ::..:::: : ..
XP_011 WNWIQLWNYAQPPDVILEPNVTPGNCWAFEGDRGQVTIQLAQKVYLSNLTLQHIPKTISL
210 220 230 240 250 260
350 360 370 380 390 400
pF1KB7 TGGANSAPRDFAVFGLQVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILS
.:. ..::.::...:.. . :: :: : :. : . :: : :::.: :: ::..: :
XP_011 SGSLDTAPKDFVIYGMEGSPKEEVFLGAFQFQPE-NIIQMFPLQNQPARAFSAVKVKISS
270 280 290 300 310
410 420 430
pF1KB7 NWGHPRFTCLYRVRAHGVRTSEGAEGSAQGPH
:::.: ::::::::.:: .. : :.:.
XP_011 NWGNPGFTCLYRVRVHG-SVAPPREQPHQNPYPKRD
320 330 340 350
>>XP_011526875 (OMIM: 613942) PREDICTED: SUN domain-cont (402 aa)
initn: 657 init1: 479 opt: 763 Z-score: 679.9 bits: 134.8 E(85289): 3.9e-31
Smith-Waterman score: 764; 39.3% identity (67.7% similar) in 331 aa overlap (122-437:74-398)
100 110 120 130 140
pF1KB7 GAATVRGGASEPTGSPVVSEEPLDLLPTLDLRQEMPPPRVFKS-----FLSLLFQGLSVL
: . . :: : : :.. . :
XP_011 NMNDNILLPVRNNDQALGLTQCMLGCVFWLLVSPIHPPVEFISSPRPYFIAWFTCFACSL
50 60 70 80 90 100
150 160 170 180 190
pF1KB7 LSLAGDVLVSMYRE--VCSIRFLFTAVSLLSLFLSAFWLGLLYLVSPLE-------NEPK
. : .:: . : .:. . :.. :: : .::. ..: : .. : :
XP_011 RTQAQQVLFNTCRCKLLCQKLMEKTGILLLCAF--GFWMFSIHLPSKMKVWQDDSINGPL
110 120 130 140 150 160
200 210 220 230 240 250
pF1KB7 EMLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSE-RVAKLVFQRLNEDFVRK
. : : :.:.:: .. ..:.:.. ...: ... ..: ..: ..:. ... .. :...:
XP_011 QSLRL--YQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMAQKIMKMIHGDYIEK
170 180 190 200 210
260 270 280 290 300 310
pF1KB7 PDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTVILEPHVFPGNCWAFEG
::.::.:.:::::...:: : ... .:: ...::::.:: :::::.: :::::::::
XP_011 PDFALKSIGASIDFEHTSVTYNHEKAHSYWNWIQLWNYAQPPDVILEPNVTPGNCWAFEG
220 230 240 250 260 270
320 330 340 350 360 370
pF1KB7 DQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFGLQVYDETEVSLGKFTF
:.:::.::: .: ::..:::: : .. .:. ..::.::...:.. . :: :: : :
XP_011 DRGQVTIQLAQKVYLSNLTLQHIPKTISLSGSLDTAPKDFVIYGMEGSPKEEVFLGAFQF
280 290 300 310 320 330
380 390 400 410 420 430
pF1KB7 DVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRAHGVRTSEGAEGSAQGP
. : . :: : :::.: :: ::..: ::::.: ::::::::.:: .. : :.:
XP_011 QPE-NIIQMFPLQNQPARAFSAVKVKISSNWGNPGFTCLYRVRVHG-SVAPPREQPHQNP
340 350 360 370 380 390
pF1KB7 H
.
XP_011 YPKRD
400
>>XP_011528406 (OMIM: 613569) PREDICTED: SUN domain-cont (671 aa)
initn: 520 init1: 319 opt: 543 Z-score: 483.8 bits: 99.3 E(85289): 3.3e-20
Smith-Waterman score: 543; 39.7% identity (68.2% similar) in 214 aa overlap (212-422:454-667)
190 200 210 220 230
pF1KB7 WLGLLYLVSPLENEPKEMLTLSEYHERVRSQGQQLQQLQAELD-KLHKE-VSTVRAANSE
::.. .. : :. :.:: : : . .
XP_011 GGRVGLLQREEMQAQLRELESKILTHVAEMQGKSAREAAASLSLTLQKEGVIGVTEEQVH
430 440 450 460 470 480
240 250 260 270 280 290
pF1KB7 RVAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPT
...: ..:: .:: . :::: : :::. . :. : ... . .: ... :
XP_011 HIVKQALQRYSEDRIGLADYALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPR
490 500 510 520 530 540
300 310 320 330 340 350
pF1KB7 VILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVF
:::.: : :::::::.: :: .:..: .:.. . .::.: : .. .. .:::.:::.:
XP_011 VILQPDVHPGNCWAFQGPQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIF
550 560 570 580 590 600
360 370 380 390 400 410
pF1KB7 GLQVYDETEVSL-GKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRV
:.. . : .: ::::.: . :::::.: :.. :...::.:::::..::.::
XP_011 GFDEDLQQEGTLLGKFTYDQDGEPIQTFHFQAPTMATYQVVELRILTNWGHPEYTCIYRF
610 620 630 640 650 660
420 430
pF1KB7 RAHGVRTSEGAEGSAQGPH
:.::
XP_011 RVHGEPAH
670
>>XP_011528407 (OMIM: 613569) PREDICTED: SUN domain-cont (706 aa)
initn: 520 init1: 319 opt: 543 Z-score: 483.5 bits: 99.3 E(85289): 3.4e-20
Smith-Waterman score: 543; 39.7% identity (68.2% similar) in 214 aa overlap (212-422:489-702)
190 200 210 220 230
pF1KB7 WLGLLYLVSPLENEPKEMLTLSEYHERVRSQGQQLQQLQAELD-KLHKE-VSTVRAANSE
::.. .. : :. :.:: : : . .
XP_011 GGRVGLLQREEMQAQLRELESKILTHVAEMQGKSAREAAASLSLTLQKEGVIGVTEEQVH
460 470 480 490 500 510
240 250 260 270 280 290
pF1KB7 RVAKLVFQRLNEDFVRKPDYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPT
...: ..:: .:: . :::: : :::. . :. : ... . .: ... :
XP_011 HIVKQALQRYSEDRIGLADYALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPR
520 530 540 550 560 570
300 310 320 330 340 350
pF1KB7 VILEPHVFPGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVF
:::.: : :::::::.: :: .:..: .:.. . .::.: : .. .. .:::.:::.:
XP_011 VILQPDVHPGNCWAFQGPQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIF
580 590 600 610 620 630
360 370 380 390 400 410
pF1KB7 GLQVYDETEVSL-GKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRV
:.. . : .: ::::.: . :::::.: :.. :...::.:::::..::.::
XP_011 GFDEDLQQEGTLLGKFTYDQDGEPIQTFHFQAPTMATYQVVELRILTNWGHPEYTCIYRF
640 650 660 670 680 690
420 430
pF1KB7 RAHGVRTSEGAEGSAQGPH
:.::
XP_011 RVHGEPAH
700
437 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 05:41:39 2016 done: Fri Nov 4 05:41:40 2016
Total Scan time: 10.310 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]