Result of FASTA (ccds) for pFN21AA0107
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0107, 389 aa
  1>>>pF1KA0107 389 - 389 aa - 389 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.9466+/-0.00108; mu= 13.4012+/- 0.065
 mean_var=71.2535+/-13.975, 0's: 0 Z-trim(103.2): 33  B-trim: 6 in 1/49
 Lambda= 0.151940
 statistics sampled from 7274 (7290) to 7274 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.58), E-opt: 0.2 (0.224), width:  16
 Scan time:  1.830

The best scores are:                                      opt bits E(32554)
CCDS2901.1 PSMD6 gene_id:9861|Hs108|chr3           ( 389) 2541 566.5 1.5e-161
CCDS63678.1 PSMD6 gene_id:9861|Hs108|chr3          ( 350) 2225 497.2 9.4e-141
CCDS63679.1 PSMD6 gene_id:9861|Hs108|chr3          ( 351) 2221 496.3 1.7e-140
CCDS63677.1 PSMD6 gene_id:9861|Hs108|chr3          ( 442) 2219 495.9 2.9e-140
CCDS82227.1 GPS1 gene_id:2873|Hs108|chr17          ( 486)  349 86.0 7.8e-17
CCDS82225.1 GPS1 gene_id:2873|Hs108|chr17          ( 490)  348 85.8 9.2e-17
CCDS82228.1 GPS1 gene_id:2873|Hs108|chr17          ( 471)  273 69.4 7.9e-12
CCDS82226.1 GPS1 gene_id:2873|Hs108|chr17          ( 487)  273 69.4 8.1e-12
CCDS32774.1 GPS1 gene_id:2873|Hs108|chr17          ( 491)  273 69.4 8.2e-12
CCDS11800.1 GPS1 gene_id:2873|Hs108|chr17          ( 527)  273 69.4 8.7e-12


>>CCDS2901.1 PSMD6 gene_id:9861|Hs108|chr3                (389 aa)
 initn: 2541 init1: 2541 opt: 2541  Z-score: 3014.0  bits: 566.5 E(32554): 1.5e-161
Smith-Waterman score: 2541; 100.0% identity (100.0% similar) in 389 aa overlap (1-389:1-389)

               10        20        30        40        50        60
pF1KA0 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 LTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 LTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 KVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 KVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 IKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS29 IHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPD
              310       320       330       340       350       360

              370       380         
pF1KA0 SKNWQYQETIKKGDLLLNRVQKLSRVINM
       :::::::::::::::::::::::::::::
CCDS29 SKNWQYQETIKKGDLLLNRVQKLSRVINM
              370       380         

>>CCDS63678.1 PSMD6 gene_id:9861|Hs108|chr3               (350 aa)
 initn: 2225 init1: 2225 opt: 2225  Z-score: 2640.4  bits: 497.2 E(32554): 9.4e-141
Smith-Waterman score: 2225; 97.7% identity (99.4% similar) in 348 aa overlap (42-389:3-350)

              20        30        40        50        60        70 
pF1KA0 PKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLN
                                     .  .....::::::::::::::::::::::
CCDS63                             MPLENLEEEDMAPYYEALCKSLDWQIDVDLLN
                                           10        20        30  

              80        90       100       110       120       130 
pF1KA0 KMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 KMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKT
             40        50        60        70        80        90  

             140       150       160       170       180       190 
pF1KA0 VALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 VALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAI
            100       110       120       130       140       150  

             200       210       220       230       240       250 
pF1KA0 RDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 RDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLH
            160       170       180       190       200       210  

             260       270       280       290       300       310 
pF1KA0 SLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 SLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESY
            220       230       240       250       260       270  

             320       330       340       350       360       370 
pF1KA0 RSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 RSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIK
            280       290       300       310       320       330  

             380         
pF1KA0 KGDLLLNRVQKLSRVINM
       ::::::::::::::::::
CCDS63 KGDLLLNRVQKLSRVINM
            340       350

>>CCDS63679.1 PSMD6 gene_id:9861|Hs108|chr3               (351 aa)
 initn: 2221 init1: 2221 opt: 2221  Z-score: 2635.7  bits: 496.3 E(32554): 1.7e-140
Smith-Waterman score: 2221; 99.7% identity (100.0% similar) in 341 aa overlap (49-389:11-351)

       20        30        40        50        60        70        
pF1KA0 IAQLRFLLSLPEHRGDAAVRDELMAAVRDNNMAPYYEALCKSLDWQIDVDLLNKMKKANE
                                     .:::::::::::::::::::::::::::::
CCDS63                     MNESNDSTNYDMAPYYEALCKSLDWQIDVDLLNKMKKANE
                                   10        20        30        40

       80        90       100       110       120       130        
pF1KA0 DELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 DELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRL
               50        60        70        80        90       100

      140       150       160       170       180       190        
pF1KA0 DIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 DIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLYCVAIRDFKQAA
              110       120       130       140       150       160

      200       210       220       230       240       250        
pF1KA0 ELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 ELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQ
              170       180       190       200       210       220

      260       270       280       290       300       310        
pF1KA0 YLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 YLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGY
              230       240       250       260       270       280

      320       330       340       350       360       370        
pF1KA0 MAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 MAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLN
              290       300       310       320       330       340

      380         
pF1KA0 RVQKLSRVINM
       :::::::::::
CCDS63 RVQKLSRVINM
              350 

>>CCDS63677.1 PSMD6 gene_id:9861|Hs108|chr3               (442 aa)
 initn: 2527 init1: 2219 opt: 2219  Z-score: 2631.7  bits: 495.9 E(32554): 2.9e-140
Smith-Waterman score: 2284; 87.4% identity (87.4% similar) in 421 aa overlap (22-389:22-442)

               10        20        30        40                    
pF1KA0 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNN-----------
                            ::::::::::::::::::::::::::::           
CCDS63 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELMAAVRDNNFWNRIRQEQTE
               10        20        30        40        50        60

                                                50        60       
pF1KA0 ------------------------------------------MAPYYEALCKSLDWQIDV
                                                 ::::::::::::::::::
CCDS63 DCPPSSPSRGWHCQDWPSRKPPTSIRLCFAKPIIKRHRMPSYMAPYYEALCKSLDWQIDV
               70        80        90       100       110       120

        70        80        90       100       110       120       
pF1KA0 DLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 DLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKT
              130       140       150       160       170       180

       130       140       150       160       170       180       
pF1KA0 YDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 YDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVYQGLY
              190       200       210       220       230       240

       190       200       210       220       230       240       
pF1KA0 CVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 CVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEIL
              250       260       270       280       290       300

       250       260       270       280       290       300       
pF1KA0 EVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 EVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQL
              310       320       330       340       350       360

       310       320       330       340       350       360       
pF1KA0 LESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS63 LESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQ
              370       380       390       400       410       420

       370       380         
pF1KA0 ETIKKGDLLLNRVQKLSRVINM
       ::::::::::::::::::::::
CCDS63 ETIKKGDLLLNRVQKLSRVINM
              430       440  

>>CCDS82227.1 GPS1 gene_id:2873|Hs108|chr17               (486 aa)
 initn: 286 init1: 176 opt: 349  Z-score: 415.7  bits: 86.0 E(32554): 7.8e-17
Smith-Waterman score: 371; 23.0% identity (57.4% similar) in 383 aa overlap (15-383:68-448)

                               10        20        30        40    
pF1KA0                 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDE----
                                     : ::.  :.. ::. ..  .. . .:    
CCDS82 ENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRK
        40        50        60        70        80        90       

               50        60          70        80        90        
pF1KA0 LMAAVRDNNMAPYYEALCKS--LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGES
       :  :.:. . ::  .:. .:      .:.  ..  .:    .:..:: .:.. . :  . 
CCDS82 LSEATRELQNAP--DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKE
       100         110       120       130       140       150     

      100       110       120       130       140       150        
pF1KA0 EIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLIT
        :: .    ...    ::  .::  . .. :  ..  : ... . ....... .. . . 
CCDS82 SIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVL
         160       170       180       190       200       210     

      160         170            180       190        200       210
pF1KA0 RNTEKAKSL--IEEGGDWDRRN-----RLKVYQGLYCVAIRDFKQAAE-LFLDTVSTFTS
         . ::.:   : : :. : ..     .::   ::  .: : .::::. :.: . .    
CCDS82 SYVSKAESTPEIAERGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDF
         220       230       240       250       260       270     

              220       230       240       250       260       270
pF1KA0 YELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSV
        ::.. .. . :    .. ...: .:...::... .   :.  : ::. .:..:: .:. 
CCDS82 PELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYAS
         280       290       300       310       320       330     

              280       290       300       310       320       330
pF1KA0 FFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFI
        .. :  .....  :  .::: :    ..: .:  : .  : :  .  :: ::.. :  .
CCDS82 CLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAAL
         340       350       360       370       380       390     

              340       350       360       370       380          
pF1KA0 DQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM 
       ..::...:  : .  ..:. ..:. .   :...  .....  :  .  :.. .       
CCDS82 EDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVL
         400       410       420       430       440       450     

CCDS82 RNQIHVKSPPREGSQGELTPANSQSRMSTNM
         460       470       480      

>>CCDS82225.1 GPS1 gene_id:2873|Hs108|chr17               (490 aa)
 initn: 286 init1: 176 opt: 348  Z-score: 414.4  bits: 85.8 E(32554): 9.2e-17
Smith-Waterman score: 360; 22.2% identity (57.1% similar) in 387 aa overlap (15-383:68-452)

                               10        20        30        40    
pF1KA0                 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELM--
                                     : ::.  :.. ::. ..  .. . .:.   
CCDS82 ENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRK
        40        50        60        70        80        90       

                   50        60          70        80        90    
pF1KA0 ------AAVRDNNMAPYYEALCKS--LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKN
             ...:. . ::  .:. .:      .:.  ..  .:    .:..:: .:.. . :
CCDS82 LSEATRSSLRELQNAP--DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGN
       100       110         120       130       140       150     

          100       110       120       130       140       150    
pF1KA0 LGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDN
         .  :: .    ...    ::  .::  . .. :  ..  : ... . ....... .. 
CCDS82 SIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNW
         160       170       180       190       200       210     

          160         170            180       190        200      
pF1KA0 DLITRNTEKAKSL--IEEGGDWDRRN-----RLKVYQGLYCVAIRDFKQAAE-LFLDTVS
       . .   . ::.:   : : :. : ..     .::   ::  .: : .::::. :.: . .
CCDS82 SHVLSYVSKAESTPEIAERGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFD
         220       230       240       250       260       270     

        210       220       230       240       250       260      
pF1KA0 TFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYEC
            ::.. .. . :    .. ...: .:...::... .   :.  : ::. .:..:: 
CCDS82 HCDFPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYES
         280       290       300       310       320       330     

        270       280       290       300       310       320      
pF1KA0 RYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVG
       .:.  .. :  .....  :  .::: :    ..: .:  : .  : :  .  :: ::.. 
CCDS82 KYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTT
         340       350       360       370       380       390     

        330       340       350       360       370       380      
pF1KA0 VEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRV
       :  ...::...:  : .  ..:. ..:. .   :...  .....  :  .  :.. .   
CCDS82 VAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLR
         400       410       420       430       440       450     

                                          
pF1KA0 INM                                
                                          
CCDS82 AAVLRNQIHVKSPPREGSQGELTPANSQSRMSTNM
         460       470       480       490

>>CCDS82228.1 GPS1 gene_id:2873|Hs108|chr17               (471 aa)
 initn: 286 init1: 176 opt: 273  Z-score: 325.8  bits: 69.4 E(32554): 7.9e-12
Smith-Waterman score: 369; 22.7% identity (57.6% similar) in 384 aa overlap (15-383:52-433)

                               10        20        30        40    
pF1KA0                 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDE----
                                     : ::.  :.. ::. ..  .. . .:    
CCDS82 ENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRK
              30        40        50        60        70        80 

               50        60          70        80        90        
pF1KA0 LMAAVRDNNMAPYYEALCKS--LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGES
       :  :.:. . ::  .:. .:      .:.  ..  .:    .:..:: .:.. . :  . 
CCDS82 LSEATRELQNAP--DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKE
              90         100       110       120       130         

      100       110       120       130       140       150        
pF1KA0 EIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLIT
        :: .    ...    ::  .::  . .. :  ..  : ... . ....... .. . . 
CCDS82 SIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVL
     140       150       160       170       180       190         

      160          170            180       190        200         
pF1KA0 RNTEKAKS---LIEEGGDWDRRN-----RLKVYQGLYCVAIRDFKQAAE-LFLDTVSTFT
         . ::.:   . :. :. : ..     .::   ::  .: : .::::. :.: . .   
CCDS82 SYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCD
     200       210       220       230       240       250         

     210       220       230       240       250       260         
pF1KA0 SYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYS
         ::.. .. . :    .. ...: .:...::... .   :.  : ::. .:..:: .:.
CCDS82 FPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYA
     260       270       280       290       300       310         

     270       280       290       300       310       320         
pF1KA0 VFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEF
         .. :  .....  :  .::: :    ..: .:  : .  : :  .  :: ::.. :  
CCDS82 SCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAA
     320       330       340       350       360       370         

     330       340       350       360       370       380         
pF1KA0 IDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM
       ...::...:  : .  ..:. ..:. .   :...  .....  :  .  :.. .      
CCDS82 LEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAV
     380       390       400       410       420       430         

CCDS82 LRNQIHVKSPPREGSQGELTPANSQSRMSTNM
     440       450       460       470 

>>CCDS82226.1 GPS1 gene_id:2873|Hs108|chr17               (487 aa)
 initn: 286 init1: 176 opt: 273  Z-score: 325.6  bits: 69.4 E(32554): 8.1e-12
Smith-Waterman score: 369; 22.7% identity (57.6% similar) in 384 aa overlap (15-383:68-449)

                               10        20        30        40    
pF1KA0                 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDE----
                                     : ::.  :.. ::. ..  .. . .:    
CCDS82 ENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRK
        40        50        60        70        80        90       

               50        60          70        80        90        
pF1KA0 LMAAVRDNNMAPYYEALCKS--LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGES
       :  :.:. . ::  .:. .:      .:.  ..  .:    .:..:: .:.. . :  . 
CCDS82 LSEATRELQNAP--DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKE
       100         110       120       130       140       150     

      100       110       120       130       140       150        
pF1KA0 EIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLIT
        :: .    ...    ::  .::  . .. :  ..  : ... . ....... .. . . 
CCDS82 SIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVL
         160       170       180       190       200       210     

      160          170            180       190        200         
pF1KA0 RNTEKAKS---LIEEGGDWDRRN-----RLKVYQGLYCVAIRDFKQAAE-LFLDTVSTFT
         . ::.:   . :. :. : ..     .::   ::  .: : .::::. :.: . .   
CCDS82 SYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCD
         220       230       240       250       260       270     

     210       220       230       240       250       260         
pF1KA0 SYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYS
         ::.. .. . :    .. ...: .:...::... .   :.  : ::. .:..:: .:.
CCDS82 FPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYA
         280       290       300       310       320       330     

     270       280       290       300       310       320         
pF1KA0 VFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEF
         .. :  .....  :  .::: :    ..: .:  : .  : :  .  :: ::.. :  
CCDS82 SCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAA
         340       350       360       370       380       390     

     330       340       350       360       370       380         
pF1KA0 IDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM
       ...::...:  : .  ..:. ..:. .   :...  .....  :  .  :.. .      
CCDS82 LEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAV
         400       410       420       430       440       450     

CCDS82 LRNQIHVKSPPREGSQGELTPANSQSRMSTNM
         460       470       480       

>>CCDS32774.1 GPS1 gene_id:2873|Hs108|chr17               (491 aa)
 initn: 286 init1: 176 opt: 273  Z-score: 325.6  bits: 69.4 E(32554): 8.2e-12
Smith-Waterman score: 358; 21.9% identity (57.2% similar) in 388 aa overlap (15-383:68-453)

                               10        20        30        40    
pF1KA0                 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDELM--
                                     : ::.  :.. ::. ..  .. . .:.   
CCDS32 ENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRK
        40        50        60        70        80        90       

                   50        60          70        80        90    
pF1KA0 ------AAVRDNNMAPYYEALCKS--LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKN
             ...:. . ::  .:. .:      .:.  ..  .:    .:..:: .:.. . :
CCDS32 LSEATRSSLRELQNAP--DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGN
       100       110         120       130       140       150     

          100       110       120       130       140       150    
pF1KA0 LGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDN
         .  :: .    ...    ::  .::  . .. :  ..  : ... . ....... .. 
CCDS32 SIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNW
         160       170       180       190       200       210     

          160          170            180       190        200     
pF1KA0 DLITRNTEKAKS---LIEEGGDWDRRN-----RLKVYQGLYCVAIRDFKQAAE-LFLDTV
       . .   . ::.:   . :. :. : ..     .::   ::  .: : .::::. :.: . 
CCDS32 SHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASF
         220       230       240       250       260       270     

         210       220       230       240       250       260     
pF1KA0 STFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYE
       .     ::.. .. . :    .. ...: .:...::... .   :.  : ::. .:..::
CCDS32 DHCDFPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYE
         280       290       300       310       320       330     

         270       280       290       300       310       320     
pF1KA0 CRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGV
        .:.  .. :  .....  :  .::: :    ..: .:  : .  : :  .  :: ::..
CCDS32 SKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNT
         340       350       360       370       380       390     

         330       340       350       360       370       380     
pF1KA0 GVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSR
        :  ...::...:  : .  ..:. ..:. .   :...  .....  :  .  :.. .  
CCDS32 TVAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMML
         400       410       420       430       440       450     

                                           
pF1KA0 VINM                                
                                           
CCDS32 RAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTNM
         460       470       480       490 

>>CCDS11800.1 GPS1 gene_id:2873|Hs108|chr17               (527 aa)
 initn: 286 init1: 176 opt: 273  Z-score: 325.1  bits: 69.4 E(32554): 8.7e-12
Smith-Waterman score: 369; 22.7% identity (57.6% similar) in 384 aa overlap (15-383:108-489)

                               10        20        30        40    
pF1KA0                 MPLENLEEEGLPKNPDLRIAQLRFLLSLPEHRGDAAVRDE----
                                     : ::.  :.. ::. ..  .. . .:    
CCDS11 ENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRK
        80        90       100       110       120       130       

               50        60          70        80        90        
pF1KA0 LMAAVRDNNMAPYYEALCKS--LDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGES
       :  :.:. . ::  .:. .:      .:.  ..  .:    .:..:: .:.. . :  . 
CCDS11 LSEATRELQNAP--DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKE
       140         150       160       170       180       190     

      100       110       120       130       140       150        
pF1KA0 EIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLIT
        :: .    ...    ::  .::  . .. :  ..  : ... . ....... .. . . 
CCDS11 SIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVL
         200       210       220       230       240       250     

      160          170            180       190        200         
pF1KA0 RNTEKAKS---LIEEGGDWDRRN-----RLKVYQGLYCVAIRDFKQAAE-LFLDTVSTFT
         . ::.:   . :. :. : ..     .::   ::  .: : .::::. :.: . .   
CCDS11 SYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCD
         260       270       280       290       300       310     

     210       220       230       240       250       260         
pF1KA0 SYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYS
         ::.. .. . :    .. ...: .:...::... .   :.  : ::. .:..:: .:.
CCDS11 FPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYA
         320       330       340       350       360       370     

     270       280       290       300       310       320         
pF1KA0 VFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEF
         .. :  .....  :  .::: :    ..: .:  : .  : :  .  :: ::.. :  
CCDS11 SCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAA
         380       390       400       410       420       430     

     330       340       350       360       370       380         
pF1KA0 IDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM
       ...::...:  : .  ..:. ..:. .   :...  .....  :  .  :.. .      
CCDS11 LEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAV
         440       450       460       470       480       490     

CCDS11 LRNQIHVKSPPREGSQGELTPANSQSRMSTNM
         500       510       520       




389 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 00:28:57 2016 done: Fri Nov  4 00:28:58 2016
 Total Scan time:  1.830 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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