Result of FASTA (ccds) for
pFN21AB4592
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4592, 601 aa
1>>>pF1KB4592 601 - 601 aa - 601 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7667+/-0.00114; mu= 16.4724+/- 0.068
mean_var=70.4783+/-13.630, 0's: 0 Z-trim(102.4): 34 B-trim: 28 in 1/46
Lambda= 0.152773
statistics sampled from 6932 (6953) to 6932 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.568), E-opt: 0.2 (0.214), width: 16
Scan time: 3.480
The best scores are: opt bits E(32554)
CCDS8349.1 PPP2R1B gene_id:5519|Hs108|chr11 ( 601) 3843 856.8 0
CCDS8348.1 PPP2R1B gene_id:5519|Hs108|chr11 ( 667) 3829 853.7 0
CCDS12849.1 PPP2R1A gene_id:5518|Hs108|chr19 ( 589) 3315 740.4 1.5e-213
CCDS53706.1 PPP2R1B gene_id:5519|Hs108|chr11 ( 603) 3178 710.2 1.9e-204
CCDS53707.1 PPP2R1B gene_id:5519|Hs108|chr11 ( 474) 2381 534.5 1.2e-151
CCDS53708.1 PPP2R1B gene_id:5519|Hs108|chr11 ( 556) 2296 515.8 5.8e-146
>>CCDS8349.1 PPP2R1B gene_id:5519|Hs108|chr11 (601 aa)
initn: 3843 init1: 3843 opt: 3843 Z-score: 4576.1 bits: 856.8 E(32554): 0
Smith-Waterman score: 3843; 100.0% identity (100.0% similar) in 601 aa overlap (1-601:1-601)
10 20 30 40 50 60
pF1KB4 MAGASELGTGPGAAGGDGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 MAGASELGTGPGAAGGDGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 SELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 VESLRQISQEHTPVALEAYFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VESLRQISQEHTPVALEAYFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 QFRSLCSDDTPMVRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 QFRSLCSDDTPMVRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEAC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 VSIAQLLSQDDLETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKITLNDLIPAFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VSIAQLLSQDDLETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKITLNDLIPAFQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 NLLKDCEAEVRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 NLLKDCEAEVRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 IMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 IMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 LVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPIVLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 LVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPIVLKM
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 AGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQEAISVLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 AGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQEAISVLAL
550 560 570 580 590 600
pF1KB4 A
:
CCDS83 A
>>CCDS8348.1 PPP2R1B gene_id:5519|Hs108|chr11 (667 aa)
initn: 4060 init1: 3829 opt: 3829 Z-score: 4558.7 bits: 853.7 E(32554): 0
Smith-Waterman score: 3829; 99.8% identity (100.0% similar) in 599 aa overlap (1-599:1-599)
10 20 30 40 50 60
pF1KB4 MAGASELGTGPGAAGGDGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 MAGASELGTGPGAAGGDGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 SELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 VESLRQISQEHTPVALEAYFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VESLRQISQEHTPVALEAYFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 QFRSLCSDDTPMVRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 QFRSLCSDDTPMVRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEAC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 VSIAQLLSQDDLETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKITLNDLIPAFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VSIAQLLSQDDLETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKITLNDLIPAFQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 NLLKDCEAEVRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 NLLKDCEAEVRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB4 IMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 IMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB4 VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB4 LVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPIVLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS83 LVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPIVLKM
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB4 AGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQEAISVLAL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
CCDS83 AGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQEAISVVAQ
550 560 570 580 590 600
pF1KB4 A
CCDS83 RLRKLEFPVKDSGEPSVPRADKNHFPRPTVPGEDMGKGPVYQLRGDTRDTLAQLGIAELV
610 620 630 640 650 660
>>CCDS12849.1 PPP2R1A gene_id:5518|Hs108|chr19 (589 aa)
initn: 3315 init1: 3315 opt: 3315 Z-score: 3947.3 bits: 740.4 E(32554): 1.5e-213
Smith-Waterman score: 3315; 86.2% identity (96.8% similar) in 588 aa overlap (14-601:2-589)
10 20 30 40 50 60
pF1KB4 MAGASELGTGPGAAGGDGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTR
:..::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTR
10 20 30 40
70 80 90 100 110 120
pF1KB4 SELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKA
::::::::::::::::::::::::::.:: :::::...::::::::.:::::::::::::
CCDS12 SELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKA
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB4 VESLRQISQEHTPVALEAYFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQ
::::: ::.::.: :::.:::::::::.::::::::::::::::::::.:.:::::.::
CCDS12 VESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQ
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB4 QFRSLCSDDTPMVRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEAC
::.:::::::::::::::::::::::::::.:::::.:.:..:::::::::::::::::
CCDS12 YFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEAC
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB4 VSIAQLLSQDDLETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKITLNDLIPAFQ
:.::::: :.:::.:::::::::::::::::::::::.:.:::::.::.:: .::.::::
CCDS12 VNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQ
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB4 NLLKDCEAEVRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASV
::.:::::::::::.:::::. ::: . ::..::.:::: :::::::.:::::::::::
CCDS12 NLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASV
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB4 IMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAI
::::: ::::.:::::::::::::::::::.:::::::::::::::::::::::::::::
CCDS12 IMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAI
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB4 VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: :
CCDS12 VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKK
410 420 430 440 450 460
490 500 510 520 530 540
pF1KB4 LVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPIVLKM
::.::: :::. ::.::::.:..:::::::::::::::.:::.:::.::::.::: ::.:
CCDS12 LVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRM
470 480 490 500 510 520
550 560 570 580 590 600
pF1KB4 AGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQEAISVLAL
::: ::::::::::::::::::::...::.::::.:.:: ::.:.:::::::::..::.:
CCDS12 AGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVLSL
530 540 550 560 570 580
pF1KB4 A
:
CCDS12 A
>>CCDS53706.1 PPP2R1B gene_id:5519|Hs108|chr11 (603 aa)
initn: 3646 init1: 3178 opt: 3178 Z-score: 3784.0 bits: 710.2 E(32554): 1.9e-204
Smith-Waterman score: 3290; 89.1% identity (89.3% similar) in 599 aa overlap (1-599:1-535)
10 20 30 40 50 60
pF1KB4 MAGASELGTGPGAAGGDGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTR
::::::::::::::::::::::::::::::::::::::
CCDS53 MAGASELGTGPGAAGGDGDDSLYPIAVLIDELRNEDVQ----------------------
10 20 30
70 80 90 100 110 120
pF1KB4 SELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKA
::::::::::::::::::
CCDS53 ------------------------------------------PPLENLATVEETVVRDKA
40 50
130 140 150 160 170 180
pF1KB4 VESLRQISQEHTPVALEAYFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VESLRQISQEHTPVALEAYFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQ
60 70 80 90 100 110
190 200 210 220 230 240
pF1KB4 QFRSLCSDDTPMVRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QFRSLCSDDTPMVRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEAC
120 130 140 150 160 170
250 260 270 280 290 300
pF1KB4 VSIAQLLSQDDLETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKITLNDLIPAFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VSIAQLLSQDDLETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKITLNDLIPAFQ
180 190 200 210 220 230
310 320 330 340 350 360
pF1KB4 NLLKDCEAEVRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 NLLKDCEAEVRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASV
240 250 260 270 280 290
370 380 390 400 410 420
pF1KB4 IMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAI
300 310 320 330 340 350
430 440 450 460 470 480
pF1KB4 VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMK
360 370 380 390 400 410
490 500 510 520 530 540
pF1KB4 LVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPIVLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPIVLKM
420 430 440 450 460 470
550 560 570 580 590 600
pF1KB4 AGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQEAISVLAL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
CCDS53 AGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQEAISVVAQ
480 490 500 510 520 530
pF1KB4 A
CCDS53 RLRKLEFPVKDSGEPSVPRADKNHFPRPTVPGEDMGKGPVYQLRGDTRDTLAQLGIAELV
540 550 560 570 580 590
>>CCDS53707.1 PPP2R1B gene_id:5519|Hs108|chr11 (474 aa)
initn: 2381 init1: 2381 opt: 2381 Z-score: 2836.3 bits: 534.5 E(32554): 1.2e-151
Smith-Waterman score: 2768; 78.9% identity (78.9% similar) in 601 aa overlap (1-601:1-474)
10 20 30 40 50 60
pF1KB4 MAGASELGTGPGAAGGDGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MAGASELGTGPGAAGGDGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKA
::::::::::::::::::::::::::::::::::::::::::
CCDS53 SELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLL------------------
70 80 90 100
130 140 150 160 170 180
pF1KB4 VESLRQISQEHTPVALEAYFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQ
CCDS53 ------------------------------------------------------------
190 200 210 220 230 240
pF1KB4 QFRSLCSDDTPMVRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEAC
:::::::::::
CCDS53 -------------------------------------------------DSVRLLAVEAC
110
250 260 270 280 290 300
pF1KB4 VSIAQLLSQDDLETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKITLNDLIPAFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VSIAQLLSQDDLETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKITLNDLIPAFQ
120 130 140 150 160 170
310 320 330 340 350 360
pF1KB4 NLLKDCEAEVRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 NLLKDCEAEVRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASV
180 190 200 210 220 230
370 380 390 400 410 420
pF1KB4 IMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 IMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAI
240 250 260 270 280 290
430 440 450 460 470 480
pF1KB4 VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMK
300 310 320 330 340 350
490 500 510 520 530 540
pF1KB4 LVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPIVLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPIVLKM
360 370 380 390 400 410
550 560 570 580 590 600
pF1KB4 AGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQEAISVLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 AGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQEAISVLAL
420 430 440 450 460 470
pF1KB4 A
:
CCDS53 A
>>CCDS53708.1 PPP2R1B gene_id:5519|Hs108|chr11 (556 aa)
initn: 2215 init1: 2189 opt: 2296 Z-score: 2733.9 bits: 515.8 E(32554): 5.8e-146
Smith-Waterman score: 3471; 92.5% identity (92.5% similar) in 601 aa overlap (1-601:1-556)
10 20 30 40 50 60
pF1KB4 MAGASELGTGPGAAGGDGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MAGASELGTGPGAAGGDGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SELLPFLTDTIYDEDEVLLALAEQLGNFTGLVGGPDFAHCLLPPLENLATVEETVVRDKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 VESLRQISQEHTPVALEAYFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VESLRQISQEHTPVALEAYFVPLVKRLASGDWFTSRTSACGLFSVCYPRASNAVKAEIRQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 QFRSLCSDDTPMVRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QFRSLCSDDTPMVRRAAASKLGEFAKVLELDSVKSEIVPLFTSLASDEQDSVRLLAVEAC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 VSIAQLLSQDDLETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKITLNDLIPAFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VSIAQLLSQDDLETLVMPTLRQAAEDKSWRVRYMVADRFSELQKAMGPKITLNDLIPAFQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB4 NLLKDCEAEVRAAAAHKVKELGENLPIEDRETIIMNQILPYIKELVSDTNQHVKSALASV
:::::::::::::::::::::::::::::::::::::::::::
CCDS53 NLLKDCEAEVRAAAAHKVKELGENLPIEDRETIIMNQILPYIK-----------------
310 320 330 340
370 380 390 400 410 420
pF1KB4 IMGLSTILGKENTIEHLLPLFLAQLKDECPDVRLNIISNLDCVNEVIGIRQLSQSLLPAI
::::::::::::::::::::::::::::::::
CCDS53 ----------------------------CPDVRLNIISNLDCVNEVIGIRQLSQSLLPAI
350 360 370
430 440 450 460 470 480
pF1KB4 VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNNLMK
380 390 400 410 420 430
490 500 510 520 530 540
pF1KB4 LVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPIVLKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LVQKFGTEWAQNTIVPKVLVMANDPNYLHRMTTLFCINALSEACGQEITTKQMLPIVLKM
440 450 460 470 480 490
550 560 570 580 590 600
pF1KB4 AGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQEAISVLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 AGDQVANVRFNVAKSLQKIGPILDTNALQGEVKPVLQKLGQDEDMDVKYFAQEAISVLAL
500 510 520 530 540 550
pF1KB4 A
:
CCDS53 A
601 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 21:37:39 2016 done: Thu Nov 3 21:37:39 2016
Total Scan time: 3.480 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]