Result of FASTA (ccds) for pFN21AB3962
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3962, 505 aa
  1>>>pF1KB3962 505 - 505 aa - 505 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.0503+/-0.00105; mu= -12.3150+/- 0.064
 mean_var=314.2921+/-65.059, 0's: 0 Z-trim(114.0): 31  B-trim: 224 in 1/52
 Lambda= 0.072345
 statistics sampled from 14548 (14572) to 14548 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.448), width:  16
 Scan time:  4.100

The best scores are:                                      opt bits E(32554)
CCDS2262.1 ATF2 gene_id:1386|Hs108|chr2            ( 505) 3299 357.7 1.7e-98
CCDS58738.1 ATF2 gene_id:1386|Hs108|chr2           ( 487) 3172 344.5 1.6e-94
CCDS58737.1 ATF2 gene_id:1386|Hs108|chr2           ( 447) 2831 308.9 7.8e-84
CCDS44906.1 ATF7 gene_id:11016|Hs108|chr12         ( 483) 1617 182.2 1.2e-45
CCDS58739.1 ATF2 gene_id:1386|Hs108|chr2           ( 209) 1382 157.5 1.3e-38
CCDS43562.1 CREB5 gene_id:9586|Hs108|chr7          ( 475)  602 76.2 8.8e-14
CCDS5418.1 CREB5 gene_id:9586|Hs108|chr7           ( 501)  602 76.2 9.2e-14
CCDS5417.1 CREB5 gene_id:9586|Hs108|chr7           ( 508)  602 76.2 9.3e-14
CCDS43563.1 CREB5 gene_id:9586|Hs108|chr7          ( 369)  595 75.5 1.2e-13
CCDS58238.1 ATF7 gene_id:11016|Hs108|chr12         ( 117)  544 69.9 1.7e-12


>>CCDS2262.1 ATF2 gene_id:1386|Hs108|chr2                 (505 aa)
 initn: 3299 init1: 3299 opt: 3299  Z-score: 1881.8  bits: 357.7 E(32554): 1.7e-98
Smith-Waterman score: 3299; 100.0% identity (100.0% similar) in 505 aa overlap (1-505:1-505)

               10        20        30        40        50        60
pF1KB3 MKFKLHVNSARQYKDLWNMSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 MKFKLHVNSARQYKDLWNMSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 DSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEFKKASEDDIKKMPLDLSPLATPIIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 DSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEFKKASEDDIKKMPLDLSPLATPIIR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 SKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 SKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSSD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 SSVIIQQAVPSPTSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQTMPVAIPASITSSNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 SSVIIQQAVPSPTSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQTMPVAIPASITSSNV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGRRRRAANEDPDEKRRKFLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGRRRRAANEDPDEKRRKFLE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 RNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLLAHKDCPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 RNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLLAHKDCPV
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 TAMQKKSGYHTADKDDSSEDISVPSSPHTEAIQHSSVSTSNGVSSTSKAEAVATSVLTQM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 TAMQKKSGYHTADKDDSSEDISVPSSPHTEAIQHSSVSTSNGVSSTSKAEAVATSVLTQM
              430       440       450       460       470       480

              490       500     
pF1KB3 ADQSTEPALSQIVMAPSSQSQPSGS
       :::::::::::::::::::::::::
CCDS22 ADQSTEPALSQIVMAPSSQSQPSGS
              490       500     

>>CCDS58738.1 ATF2 gene_id:1386|Hs108|chr2                (487 aa)
 initn: 3172 init1: 3172 opt: 3172  Z-score: 1810.4  bits: 344.5 E(32554): 1.6e-94
Smith-Waterman score: 3172; 100.0% identity (100.0% similar) in 487 aa overlap (19-505:1-487)

               10        20        30        40        50        60
pF1KB3 MKFKLHVNSARQYKDLWNMSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARN
                         ::::::::::::::::::::::::::::::::::::::::::
CCDS58                   MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARN
                                 10        20        30        40  

               70        80        90       100       110       120
pF1KB3 DSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEFKKASEDDIKKMPLDLSPLATPIIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEFKKASEDDIKKMPLDLSPLATPIIR
             50        60        70        80        90       100  

              130       140       150       160       170       180
pF1KB3 SKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSSD
            110       120       130       140       150       160  

              190       200       210       220       230       240
pF1KB3 SSVIIQQAVPSPTSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQTMPVAIPASITSSNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SSVIIQQAVPSPTSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQTMPVAIPASITSSNV
            170       180       190       200       210       220  

              250       260       270       280       290       300
pF1KB3 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS
            230       240       250       260       270       280  

              310       320       330       340       350       360
pF1KB3 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGRRRRAANEDPDEKRRKFLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSGRRRRAANEDPDEKRRKFLE
            290       300       310       320       330       340  

              370       380       390       400       410       420
pF1KB3 RNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLLAHKDCPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLLAHKDCPV
            350       360       370       380       390       400  

              430       440       450       460       470       480
pF1KB3 TAMQKKSGYHTADKDDSSEDISVPSSPHTEAIQHSSVSTSNGVSSTSKAEAVATSVLTQM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TAMQKKSGYHTADKDDSSEDISVPSSPHTEAIQHSSVSTSNGVSSTSKAEAVATSVLTQM
            410       420       430       440       450       460  

              490       500     
pF1KB3 ADQSTEPALSQIVMAPSSQSQPSGS
       :::::::::::::::::::::::::
CCDS58 ADQSTEPALSQIVMAPSSQSQPSGS
            470       480       

>>CCDS58737.1 ATF2 gene_id:1386|Hs108|chr2                (447 aa)
 initn: 2831 init1: 2831 opt: 2831  Z-score: 1618.6  bits: 308.9 E(32554): 7.8e-84
Smith-Waterman score: 2831; 100.0% identity (100.0% similar) in 439 aa overlap (67-505:9-447)

         40        50        60        70        80        90      
pF1KB3 TNEDHLAVHKHKHEMTLKFGPARNDSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEF
                                     ::::::::::::::::::::::::::::::
CCDS58                       MYCAWMWPDQTPTPTRFLKNCEEVGLFNELASPFENEF
                                     10        20        30        

        100       110       120       130       140       150      
pF1KB3 KKASEDDIKKMPLDLSPLATPIIRSKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KKASEDDIKKMPLDLSPLATPIIRSKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQT
       40        50        60        70        80        90        

        160       170       180       190       200       210      
pF1KB3 AQPTSAIVRPASLQVPNVLLTSSDSSVIIQQAVPSPTSSTVITQAPSSNRPIVPVPGPFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AQPTSAIVRPASLQVPNVLLTSSDSSVIIQQAVPSPTSSTVITQAPSSNRPIVPVPGPFP
      100       110       120       130       140       150        

        220       230       240       250       260       270      
pF1KB3 LLLHLPNGQTMPVAIPASITSSNVHVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LLLHLPNGQTMPVAIPASITSSNVHVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKM
      160       170       180       190       200       210        

        280       290       300       310       320       330      
pF1KB3 RLKAALTQQHPPVTNGDTVKGHGSGLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RLKAALTQQHPPVTNGDTVKGHGSGLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQT
      220       230       240       250       260       270        

        340       350       360       370       380       390      
pF1KB3 QSTSGRRRRAANEDPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QSTSGRRRRAANEDPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQS
      280       290       300       310       320       330        

        400       410       420       430       440       450      
pF1KB3 EVTLLRNEVAQLKQLLLAHKDCPVTAMQKKSGYHTADKDDSSEDISVPSSPHTEAIQHSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EVTLLRNEVAQLKQLLLAHKDCPVTAMQKKSGYHTADKDDSSEDISVPSSPHTEAIQHSS
      340       350       360       370       380       390        

        460       470       480       490       500     
pF1KB3 VSTSNGVSSTSKAEAVATSVLTQMADQSTEPALSQIVMAPSSQSQPSGS
       :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VSTSNGVSSTSKAEAVATSVLTQMADQSTEPALSQIVMAPSSQSQPSGS
      400       410       420       430       440       

>>CCDS44906.1 ATF7 gene_id:11016|Hs108|chr12              (483 aa)
 initn: 1078 init1: 555 opt: 1617  Z-score: 933.3  bits: 182.2 E(32554): 1.2e-45
Smith-Waterman score: 1680; 58.5% identity (76.4% similar) in 504 aa overlap (19-500:1-480)

               10        20        30        40        50        60
pF1KB3 MKFKLHVNSARQYKDLWNMSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARN
                         :.::.::.:.:::::::::::::::::::::::::::::::.
CCDS44                   MGDDRPFVCNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPART
                                 10        20        30        40  

               70        80        90       100          110       
pF1KB3 DSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEFKKASEDDIKKM---PLDLSPLATP
       ::::.::::::::::::::::::::::::: ::.:::::...: ::    :::.:  .::
CCDS44 DSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKAADEDEKKAAAGPLDMSLPSTP
             50        60        70        80        90       100  

       120       130       140       150          160       170    
pF1KB3 IIRSKIEEPSVVETTHQDSPLPHPESTTSDEKEV---PLAQTAQPTSAIVRPASLQVPNV
        :. : :::  :...  :::   : :    ::::   :.   . :: .::::.::  :  
CCDS44 DIKIKEEEPVEVDSSPPDSPASSPCSPPLKEKEVTPKPVL-ISTPTPTIVRPGSL--P--
            110       120       130       140        150           

          180       190       200       210       220       230    
pF1KB3 LLTSSDSSVIIQQAVPSPTSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQTMPVAIPAS
       :  . :    .. ..:::::  :::::: ::: .    : .::..:: ::::::: .:. 
CCDS44 LHLGYDP---LHPTLPSPTS--VITQAPPSNRQMGSPTGSLPLVMHLANGQTMPV-LPGP
       160          170         180       190       200        210 

          240       250       260                270       280     
pF1KB3 ITSSNVHVPAAVPLVRPVTMVPSVPGIPGPS-------SP--QPVQSEAKMRLKAALTQQ
            :..:... :.:::.:::..::::::        ::  .:. :::::::::.::.:
CCDS44 ----PVQMPSVISLARPVSMVPNIPGIPGPPVNSSGSISPSGHPIPSEAKMRLKATLTHQ
                 220       230       240       250       260       

         290        300       310        320       330       340   
pF1KB3 HPPVTNG-DTVKGHGSGLVRTQSEESRPQSLQQP-ATSTTETPASPAHTTPQTQSTSGRR
          ...:   : : .: .: .. :.:.   .:.: : : ..  .:::. ::   ::.:::
CCDS44 VSSINGGCGMVVGTASTMVTARPEQSQIL-IQHPDAPSPAQPQVSPAQPTP---STGGRR
       270       280       290        300       310          320   

           350       360       370       380       390       400   
pF1KB3 RRAANEDPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRN
       ::...:::::.:..:::::::::::::::::.::.:::::::.:.: : ::..:::::::
CCDS44 RRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRN
           330       340       350       360       370       380   

           410       420        430       440       450        460 
pF1KB3 EVAQLKQLLLAHKDCPVTAMQKKS-GYHTADKDDSSEDISVPSSPHTEAIQHSSVST-SN
       :::::::::::::::::::.:::. ::  . :. :::    :..  . .:::::... ::
CCDS44 EVAQLKQLLLAHKDCPVTALQKKTQGYLESPKE-SSE----PTGSPAPVIQHSSATAPSN
           390       400       410            420       430        

             470       480          490       500     
pF1KB3 GVSSTSKAEAVATSVLTQMADQSTE---PALSQIVMAPSSQSQPSGS
       :.:  : :::::::::::::.: ::   :  :...:.:.:::     
CCDS44 GLSVRSAAEAVATSVLTQMASQRTELSMPIQSHVIMTPQSQSAGR  
      440       450       460       470       480     

>>CCDS58739.1 ATF2 gene_id:1386|Hs108|chr2                (209 aa)
 initn: 1382 init1: 1382 opt: 1382  Z-score: 806.4  bits: 157.5 E(32554): 1.3e-38
Smith-Waterman score: 1382; 100.0% identity (100.0% similar) in 209 aa overlap (1-209:1-209)

               10        20        30        40        50        60
pF1KB3 MKFKLHVNSARQYKDLWNMSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MKFKLHVNSARQYKDLWNMSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 DSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEFKKASEDDIKKMPLDLSPLATPIIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEFKKASEDDIKKMPLDLSPLATPIIR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 SKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSSD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 SSVIIQQAVPSPTSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQTMPVAIPASITSSNV
       :::::::::::::::::::::::::::::                               
CCDS58 SSVIIQQAVPSPTSSTVITQAPSSNRPIV                               
              190       200                                        

>>CCDS43562.1 CREB5 gene_id:9586|Hs108|chr7               (475 aa)
 initn: 1040 init1: 479 opt: 602  Z-score: 360.9  bits: 76.2 E(32554): 8.8e-14
Smith-Waterman score: 1022; 40.6% identity (62.6% similar) in 522 aa overlap (44-486:2-470)

            20        30        40        50        60        70   
pF1KB3 KDLWNMSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARNDSVIVADQTPTPT
                                     .:.:::::::::   ..:. ...:::::::
CCDS43                              MIHRHKHEMTLKFPSIKTDN-MLSDQTPTPT
                                            10        20         30

            80        90       100       110       120       130   
pF1KB3 RFLKNCEEVGLFNELASPFENEFKKASEDDIKKMPLDLSPLATPIIRSKIEEPSVVETTH
       ::::::::::::.::   .:.::.::.:..                              
CCDS43 RFLKNCEEVGLFSELDCSLEHEFRKAQEEE------------------------------
               40        50        60                              

           140       150       160       170       180       190   
pF1KB3 QDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSSDSSVIIQQAVPSPT
                   :..... . ...   .:.. :.. :. .. : . :..:.::::.::: 
CCDS43 ------------SSKRNISMHNAV--GGAMTGPGTHQLSSARLPNHDTNVVIQQAMPSPQ
                           70          80        90       100      

           200       210       220         230       240           
pF1KB3 SSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQT--MPVAIPASITSSNVHVPAAV--PLV
       ::.:::::::.:: : :::: .  :::: : :   ::...:... . ..   .::  :. 
CCDS43 SSSVITQAPSTNRQIGPVPGSLSSLLHLHNRQRQPMPASMPGTLPNPTMPGSSAVLMPME
        110       120       130       140       150       160      

     250       260               270       280       290        300
pF1KB3 RPVTMVPSVPGIPGP--SSP------QPVQSEAKMRLKAALTQQHPPVTNGD-TVKGHGS
       : ...  :. :. ::  :.:      ::..::::::::::::..   ..::. .. ::  
CCDS43 RQMSVNSSIMGMQGPNLSNPCASPQVQPMHSEAKMRLKAALTHHPAAMSNGNMNTMGHMM
        170       180       190       200       210       220      

                     310                    320                    
pF1KB3 GLVRTQSEE-------SRP---QSL----------QQPATSTTETP--------------
        .. .....       :.:   :.:          :.::      :              
CCDS43 EMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSH
        230       240       250       260       270       280      

          330                                   340       350      
pF1KB3 --ASPAH--TTP----------------------QT----QSTSGRRRRAANEDPDEKRR
         : :::  :.:                      ::    : :.:::::...:::::.::
CCDS43 LHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRRVVDEDPDERRR
        290       300       310       320       330       340      

        360       370       380       390       400       410      
pF1KB3 KFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLLAHK
       ::::::::::.::::::::::.:::::::.:.. : :::.::..:.:::::::::::.::
CCDS43 KFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNEVAQLKQLLLTHK
        350       360       370       380       390       400      

        420        430       440        450       460       470    
pF1KB3 DCPVTAMQKKS-GYHTADKDDSSEDIS-VPSSPHTEAIQHSSVSTSNGVSSTSKAEAVAT
       :::.:::::.: :: . .   ::   : ::.  . ..:::....::..::     :.:..
CCDS43 DCPITAMQKESQGYLSPE---SSPPASPVPACSQQQVIQHNTITTSSSVS-----EVVGS
        410       420          430       440       450             

          480       490       500     
pF1KB3 SVLTQMADQSTEPALSQIVMAPSSQSQPSGS
       :.:.:.. . :.                   
CCDS43 STLSQLTTHRTDLNPIL              
      460       470                   

>>CCDS5418.1 CREB5 gene_id:9586|Hs108|chr7                (501 aa)
 initn: 1068 init1: 479 opt: 602  Z-score: 360.5  bits: 76.2 E(32554): 9.2e-14
Smith-Waterman score: 1155; 41.4% identity (63.9% similar) in 548 aa overlap (18-486:2-496)

               10        20        30        40        50        60
pF1KB3 MKFKLHVNSARQYKDLWNMSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARN
                        :. ...::.:.::::.::: .:::: .:.:::::::::   ..
CCDS54                 MNLEQERPFVCSAPGCSQRFPTEDHLMIHRHKHEMTLKFPSIKT
                               10        20        30        40    

               70        80        90       100       110       120
pF1KB3 DSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEFKKASEDDIKKMPLDLSPLATPIIR
       :. ...:::::::::::::::::::.::   .:.::.::.:..                 
CCDS54 DN-MLSDQTPTPTRFLKNCEEVGLFSELDCSLEHEFRKAQEEE-----------------
            50        60        70        80                       

              130       140       150       160       170       180
pF1KB3 SKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSSD
                                :..... . ...   .:.. :.. :. .. : . :
CCDS54 -------------------------SSKRNISMHNAVG--GAMTGPGTHQLSSARLPNHD
                                  90         100       110         

              190       200       210       220         230        
pF1KB3 SSVIIQQAVPSPTSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQT--MPVAIPASITSS
       ..:.::::.::: ::.:::::::.:: : :::: .  :::: : :   ::...:... . 
CCDS54 TNVVIQQAMPSPQSSSVITQAPSTNRQIGPVPGSLSSLLHLHNRQRQPMPASMPGTLPNP
     120       130       140       150       160       170         

      240         250       260               270       280        
pF1KB3 NVHVPAAV--PLVRPVTMVPSVPGIPGPS------SPQ--PVQSEAKMRLKAALTQQHPP
       ..   .::  :. : ...  :. :. ::.      :::  :..::::::::::::..   
CCDS54 TMPGSSAVLMPMERQMSVNSSIMGMQGPNLSNPCASPQVQPMHSEAKMRLKAALTHHPAA
     180       190       200       210       220       230         

      290        300              310                    320       
pF1KB3 VTNGD-TVKGHGSGLVRTQSEE-------SRP---QSL----------QQPATSTTETP-
       ..::. .. ::   .. .....       :.:   :.:          :.::      : 
CCDS54 MSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPH
     240       250       260       270       280       290         

                       330                                   340   
pF1KB3 ---------------ASPAH--TTP----------------------QT----QSTSGRR
                      : :::  :.:                      ::    : :.:::
CCDS54 HQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRR
     300       310       320       330       340       350         

           350       360       370       380       390       400   
pF1KB3 RRAANEDPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRN
       ::...:::::.::::::::::::.::::::::::.:::::::.:.. : :::.::..:.:
CCDS54 RRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKN
     360       370       380       390       400       410         

           410       420        430       440        450       460 
pF1KB3 EVAQLKQLLLAHKDCPVTAMQKKS-GYHTADKDDSSEDIS-VPSSPHTEAIQHSSVSTSN
       ::::::::::.:::::.:::::.: :: .    .::   : ::.  . ..:::....::.
CCDS54 EVAQLKQLLLTHKDCPITAMQKESQGYLS---PESSPPASPVPACSQQQVIQHNTITTSS
     420       430       440          450       460       470      

             470       480       490       500     
pF1KB3 GVSSTSKAEAVATSVLTQMADQSTEPALSQIVMAPSSQSQPSGS
       .::     :.:..:.:.:.. . :.                   
CCDS54 SVS-----EVVGSSTLSQLTTHRTDLNPIL              
             480       490       500               

>>CCDS5417.1 CREB5 gene_id:9586|Hs108|chr7                (508 aa)
 initn: 1068 init1: 479 opt: 602  Z-score: 360.4  bits: 76.2 E(32554): 9.3e-14
Smith-Waterman score: 1155; 41.4% identity (63.9% similar) in 548 aa overlap (18-486:9-503)

               10        20        30        40        50        60
pF1KB3 MKFKLHVNSARQYKDLWNMSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARN
                        :. ...::.:.::::.::: .:::: .:.:::::::::   ..
CCDS54          MIYEESKMNLEQERPFVCSAPGCSQRFPTEDHLMIHRHKHEMTLKFPSIKT
                        10        20        30        40        50 

               70        80        90       100       110       120
pF1KB3 DSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEFKKASEDDIKKMPLDLSPLATPIIR
       :. ...:::::::::::::::::::.::   .:.::.::.:..                 
CCDS54 DN-MLSDQTPTPTRFLKNCEEVGLFSELDCSLEHEFRKAQEEE-----------------
               60        70        80        90                    

              130       140       150       160       170       180
pF1KB3 SKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSSD
                                :..... . ...   .:.. :.. :. .. : . :
CCDS54 -------------------------SSKRNISMHNAVG--GAMTGPGTHQLSSARLPNHD
                                    100         110       120      

              190       200       210       220         230        
pF1KB3 SSVIIQQAVPSPTSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQT--MPVAIPASITSS
       ..:.::::.::: ::.:::::::.:: : :::: .  :::: : :   ::...:... . 
CCDS54 TNVVIQQAMPSPQSSSVITQAPSTNRQIGPVPGSLSSLLHLHNRQRQPMPASMPGTLPNP
        130       140       150       160       170       180      

      240         250       260               270       280        
pF1KB3 NVHVPAAV--PLVRPVTMVPSVPGIPGPS------SPQ--PVQSEAKMRLKAALTQQHPP
       ..   .::  :. : ...  :. :. ::.      :::  :..::::::::::::..   
CCDS54 TMPGSSAVLMPMERQMSVNSSIMGMQGPNLSNPCASPQVQPMHSEAKMRLKAALTHHPAA
        190       200       210       220       230       240      

      290        300              310                    320       
pF1KB3 VTNGD-TVKGHGSGLVRTQSEE-------SRP---QSL----------QQPATSTTETP-
       ..::. .. ::   .. .....       :.:   :.:          :.::      : 
CCDS54 MSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPH
        250       260       270       280       290       300      

                       330                                   340   
pF1KB3 ---------------ASPAH--TTP----------------------QT----QSTSGRR
                      : :::  :.:                      ::    : :.:::
CCDS54 HQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRR
        310       320       330       340       350       360      

           350       360       370       380       390       400   
pF1KB3 RRAANEDPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRN
       ::...:::::.::::::::::::.::::::::::.:::::::.:.. : :::.::..:.:
CCDS54 RRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKN
        370       380       390       400       410       420      

           410       420        430       440        450       460 
pF1KB3 EVAQLKQLLLAHKDCPVTAMQKKS-GYHTADKDDSSEDIS-VPSSPHTEAIQHSSVSTSN
       ::::::::::.:::::.:::::.: :: .    .::   : ::.  . ..:::....::.
CCDS54 EVAQLKQLLLTHKDCPITAMQKESQGYLS---PESSPPASPVPACSQQQVIQHNTITTSS
        430       440       450          460       470       480   

             470       480       490       500     
pF1KB3 GVSSTSKAEAVATSVLTQMADQSTEPALSQIVMAPSSQSQPSGS
       .::     :.:..:.:.:.. . :.                   
CCDS54 SVS-----EVVGSSTLSQLTTHRTDLNPIL              
                490       500                      

>>CCDS43563.1 CREB5 gene_id:9586|Hs108|chr7               (369 aa)
 initn: 697 init1: 479 opt: 595  Z-score: 358.7  bits: 75.5 E(32554): 1.2e-13
Smith-Waterman score: 690; 41.6% identity (62.9% similar) in 356 aa overlap (210-486:17-364)

     180       190       200       210       220         230       
pF1KB3 DSSVIIQQAVPSPTSSTVITQAPSSNRPIVPVPGPFPLLLHLPNGQT--MPVAIPASITS
                                     :::: .  :::: : :   ::...:... .
CCDS43               MFCTSGGNSASVMSMRPVPGSLSSLLHLHNRQRQPMPASMPGTLPN
                             10        20        30        40      

       240         250       260               270       280       
pF1KB3 SNVHVPAAV--PLVRPVTMVPSVPGIPGP--SSP------QPVQSEAKMRLKAALTQQHP
        ..   .::  :. : ...  :. :. ::  :.:      ::..::::::::::::..  
CCDS43 PTMPGSSAVLMPMERQMSVNSSIMGMQGPNLSNPCASPQVQPMHSEAKMRLKAALTHHPA
         50        60        70        80        90       100      

       290        300              310                    320      
pF1KB3 PVTNGD-TVKGHGSGLVRTQSEE-------SRP---QSL----------QQPATSTTETP
        ..::. .. ::   .. .....       :.:   :.:          :.::      :
CCDS43 AMSNGNMNTMGHMMEMMGSRQDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQP
        110       120       130       140       150       160      

                        330                                   340  
pF1KB3 ----------------ASPAH--TTP----------------------QT----QSTSGR
                       : :::  :.:                      ::    : :.::
CCDS43 HHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGR
        170       180       190       200       210       220      

            350       360       370       380       390       400  
pF1KB3 RRRAANEDPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLR
       :::...:::::.::::::::::::.::::::::::.:::::::.:.. : :::.::..:.
CCDS43 RRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLK
        230       240       250       260       270       280      

            410       420        430       440        450       460
pF1KB3 NEVAQLKQLLLAHKDCPVTAMQKKS-GYHTADKDDSSEDIS-VPSSPHTEAIQHSSVSTS
       :::::::::::.:::::.:::::.: :: . .   ::   : ::.  . ..:::....::
CCDS43 NEVAQLKQLLLTHKDCPITAMQKESQGYLSPE---SSPPASPVPACSQQQVIQHNTITTS
        290       300       310          320       330       340   

              470       480       490       500     
pF1KB3 NGVSSTSKAEAVATSVLTQMADQSTEPALSQIVMAPSSQSQPSGS
       ..::     :.:..:.:.:.. . :.                   
CCDS43 SSVS-----EVVGSSTLSQLTTHRTDLNPIL              
                350       360                       

>>CCDS58238.1 ATF7 gene_id:11016|Hs108|chr12              (117 aa)
 initn: 564 init1: 544 opt: 544  Z-score: 337.7  bits: 69.9 E(32554): 1.7e-12
Smith-Waterman score: 544; 86.4% identity (97.7% similar) in 88 aa overlap (19-106:1-88)

               10        20        30        40        50        60
pF1KB3 MKFKLHVNSARQYKDLWNMSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARN
                         :.::.::.:.:::::::::::::::::::::::::::::::.
CCDS58                   MGDDRPFVCNAPGCGQRFTNEDHLAVHKHKHEMTLKFGPART
                                 10        20        30        40  

               70        80        90       100       110       120
pF1KB3 DSVIVADQTPTPTRFLKNCEEVGLFNELASPFENEFKKASEDDIKKMPLDLSPLATPIIR
       ::::.::::::::::::::::::::::::: ::.:::::...: ::              
CCDS58 DSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKAADEDEKKARSRTVAKKLVVFR
             50        60        70        80        90       100  

              130       140       150       160       170       180
pF1KB3 SKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSSD
                                                                   
CCDS58 PRLFLLCFGIIFLIG                                             
            110                                                    




505 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 21:17:21 2016 done: Thu Nov  3 21:17:22 2016
 Total Scan time:  4.100 Total Display time:  0.070

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com