Result of FASTA (omim) for
pFN21AB5439
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5439, 207 aa
1>>>pF1KB5439 207 - 207 aa - 207 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1227+/-0.000456; mu= 14.8787+/- 0.029
mean_var=90.7825+/-18.790, 0's: 0 Z-trim(112.2): 440 B-trim: 1021 in 2/48
Lambda= 0.134609
statistics sampled from 20542 (21065) to 20542 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.247), width: 16
Scan time: 5.590
The best scores are: opt bits E(85289)
NP_004628 (OMIM: 600882,602298) ras-related protei ( 207) 1364 274.9 6.3e-74
NP_057454 (OMIM: 300285) ras-related protein Rab-9 ( 201) 696 145.2 7e-35
NP_001182257 (OMIM: 300284) ras-related protein Ra ( 201) 688 143.6 2e-34
NP_004242 (OMIM: 300284) ras-related protein Rab-9 ( 201) 688 143.6 2e-34
XP_016885453 (OMIM: 300284) PREDICTED: ras-related ( 201) 688 143.6 2e-34
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 437 94.9 1e-19
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 437 94.9 1e-19
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 437 94.9 1e-19
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 437 94.9 1e-19
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 437 95.0 1.1e-19
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 434 94.3 1.5e-19
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 430 93.6 2.6e-19
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 430 93.6 2.6e-19
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 430 93.6 2.6e-19
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 430 93.6 2.6e-19
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 429 93.4 2.9e-19
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 427 93.0 3.8e-19
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 426 92.8 4.3e-19
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 426 92.8 4.4e-19
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 425 92.6 5e-19
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 424 92.4 5.5e-19
NP_006859 (OMIM: 605694) ras-related protein Rab-3 ( 195) 423 92.2 6.2e-19
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 421 91.8 8.4e-19
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 417 91.0 1.5e-18
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 417 91.0 1.5e-18
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 416 90.8 1.6e-18
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 416 90.8 1.6e-18
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 416 90.8 1.6e-18
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 416 90.8 1.6e-18
NP_071732 (OMIM: 606281) ras-related protein Rab-3 ( 211) 416 90.8 1.7e-18
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 416 90.8 1.7e-18
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 415 90.7 2e-18
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 414 90.4 2.1e-18
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 411 89.9 3.3e-18
NP_899050 (OMIM: 201000,606144) ras-related protei ( 237) 410 89.7 4.1e-18
NP_001265596 (OMIM: 201000,606144) ras-related pro ( 237) 410 89.7 4.1e-18
NP_001265597 (OMIM: 201000,606144) ras-related pro ( 237) 410 89.7 4.1e-18
NP_001265595 (OMIM: 201000,606144) ras-related pro ( 237) 410 89.7 4.1e-18
NP_057361 (OMIM: 201000,606144) ras-related protei ( 237) 410 89.7 4.1e-18
XP_011511195 (OMIM: 615852) PREDICTED: ras-related ( 195) 407 89.1 5.4e-18
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 404 88.5 8.3e-18
XP_005245628 (OMIM: 603949) PREDICTED: ras-related ( 203) 403 88.3 9.4e-18
XP_005245626 (OMIM: 603949) PREDICTED: ras-related ( 203) 403 88.3 9.4e-18
NP_001129134 (OMIM: 603949) ras-related protein Ra ( 203) 403 88.3 9.4e-18
NP_003920 (OMIM: 603949) ras-related protein Rab-7 ( 203) 403 88.3 9.4e-18
XP_005245627 (OMIM: 603949) PREDICTED: ras-related ( 203) 403 88.3 9.4e-18
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 403 88.3 9.8e-18
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 402 88.1 1.1e-17
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 401 88.0 1.3e-17
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 401 88.0 1.3e-17
>>NP_004628 (OMIM: 600882,602298) ras-related protein Ra (207 aa)
initn: 1364 init1: 1364 opt: 1364 Z-score: 1448.2 bits: 274.9 E(85289): 6.3e-74
Smith-Waterman score: 1364; 100.0% identity (100.0% similar) in 207 aa overlap (1-207:1-207)
10 20 30 40 50 60
pF1KB5 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
130 140 150 160 170 180
190 200
pF1KB5 ELYNEFPEPIKLDKNDRAKASAESCSC
:::::::::::::::::::::::::::
NP_004 ELYNEFPEPIKLDKNDRAKASAESCSC
190 200
>>NP_057454 (OMIM: 300285) ras-related protein Rab-9B [H (201 aa)
initn: 710 init1: 679 opt: 696 Z-score: 747.3 bits: 145.2 E(85289): 7e-35
Smith-Waterman score: 696; 52.2% identity (80.8% similar) in 203 aa overlap (3-205:2-201)
10 20 30 40 50 60
pF1KB5 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
: :..:::::.:::.::::.::::.::..::..: :::..::.... :: :.::.:
NP_057 MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
::::::::::.:: . ::::::::.:.:.: ..:..: .:. ::. :. .:::.:::
NP_057 IWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
::::::.: :.:::.:..::.::. ... ::.:::::. :: ::. .:..: : ..
NP_057 VVLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQL
120 130 140 150 160 170
190 200
pF1KB5 ELYNEFPEPIKLDKNDRAKASAESCSC
: . . . : : :. .::.. :
NP_057 E-HCMLGHTI--DLNSGSKAGSSCC
180 190 200
>>NP_001182257 (OMIM: 300284) ras-related protein Rab-9A (201 aa)
initn: 675 init1: 675 opt: 688 Z-score: 738.9 bits: 143.6 E(85289): 2e-34
Smith-Waterman score: 688; 50.7% identity (79.6% similar) in 201 aa overlap (5-205:4-201)
10 20 30 40 50 60
pF1KB5 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
:. :.:::.:::.::::.::::.::..::..: :::..::.:.. :: ..::::
NP_001 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
::::::::::.:: . ::::.:::.:.:.: ..:..:..:. ::. :. ..::.:::
NP_001 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
:.::::::. .:::.:..::::: .... ::::::::.: :: ::. .: .: : .
NP_001 VILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRS
120 130 140 150 160 170
190 200
pF1KB5 ELYNEFPEPIKLDKNDRAKASAESCSC
. . . ..: . . : :. :
NP_001 DHLIQ-TDTVNLHR--KPKPSSSCC
180 190 200
>>NP_004242 (OMIM: 300284) ras-related protein Rab-9A [H (201 aa)
initn: 675 init1: 675 opt: 688 Z-score: 738.9 bits: 143.6 E(85289): 2e-34
Smith-Waterman score: 688; 50.7% identity (79.6% similar) in 201 aa overlap (5-205:4-201)
10 20 30 40 50 60
pF1KB5 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
:. :.:::.:::.::::.::::.::..::..: :::..::.:.. :: ..::::
NP_004 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
::::::::::.:: . ::::.:::.:.:.: ..:..:..:. ::. :. ..::.:::
NP_004 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
:.::::::. .:::.:..::::: .... ::::::::.: :: ::. .: .: : .
NP_004 VILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRS
120 130 140 150 160 170
190 200
pF1KB5 ELYNEFPEPIKLDKNDRAKASAESCSC
. . . ..: . . : :. :
NP_004 DHLIQ-TDTVNLHR--KPKPSSSCC
180 190 200
>>XP_016885453 (OMIM: 300284) PREDICTED: ras-related pro (201 aa)
initn: 675 init1: 675 opt: 688 Z-score: 738.9 bits: 143.6 E(85289): 2e-34
Smith-Waterman score: 688; 50.7% identity (79.6% similar) in 201 aa overlap (5-205:4-201)
10 20 30 40 50 60
pF1KB5 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
:. :.:::.:::.::::.::::.::..::..: :::..::.:.. :: ..::::
XP_016 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQ
10 20 30 40 50
70 80 90 100 110 120
pF1KB5 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
::::::::::.:: . ::::.:::.:.:.: ..:..:..:. ::. :. ..::.:::
XP_016 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB5 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
:.::::::. .:::.:..::::: .... ::::::::.: :: ::. .: .: : .
XP_016 VILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRS
120 130 140 150 160 170
190 200
pF1KB5 ELYNEFPEPIKLDKNDRAKASAESCSC
. . . ..: . . : :. :
XP_016 DHLIQ-TDTVNLHR--KPKPSSSCC
180 190 200
>>NP_004574 (OMIM: 604037) ras-related protein Rab-5C is (216 aa)
initn: 423 init1: 329 opt: 437 Z-score: 475.0 bits: 94.9 E(85289): 1e-19
Smith-Waterman score: 437; 39.7% identity (68.6% similar) in 204 aa overlap (9-206:22-215)
10 20 30 40
pF1KB5 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLT
.:...::.:.:::.::. ..:. .: . ..:::: :::
NP_004 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 KEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL
. : .:: : ..:::::::::..::. .::::. ..:.:.: .:: .: :.
NP_004 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAF
:::: :. ... ::: :: . : : ..:::. . :.. ..::::: :.::.. :
NP_004 RQASP----NIVIALAGNKADLASKRAVEFQEAQAYA-DDNSLLFMETSAKTAMNVNEIF
130 140 150 160 170
170 180 190 200
pF1KB5 QTIARNALKQETEVELYNEFPEP-----IKLDKNDRAKASAESCSC
..::.. :.: . : : . :..:. :. : . ::
NP_004 MAIAKKLPKNEPQ----NATGAPGRNRGVDLQENNPASRS-QCCSN
180 190 200 210
>>XP_011523392 (OMIM: 604037) PREDICTED: ras-related pro (216 aa)
initn: 423 init1: 329 opt: 437 Z-score: 475.0 bits: 94.9 E(85289): 1e-19
Smith-Waterman score: 437; 39.7% identity (68.6% similar) in 204 aa overlap (9-206:22-215)
10 20 30 40
pF1KB5 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLT
.:...::.:.:::.::. ..:. .: . ..:::: :::
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 KEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL
. : .:: : ..:::::::::..::. .::::. ..:.:.: .:: .: :.
XP_011 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAF
:::: :. ... ::: :: . : : ..:::. . :.. ..::::: :.::.. :
XP_011 RQASP----NIVIALAGNKADLASKRAVEFQEAQAYA-DDNSLLFMETSAKTAMNVNEIF
130 140 150 160 170
170 180 190 200
pF1KB5 QTIARNALKQETEVELYNEFPEP-----IKLDKNDRAKASAESCSC
..::.. :.: . : : . :..:. :. : . ::
XP_011 MAIAKKLPKNEPQ----NATGAPGRNRGVDLQENNPASRS-QCCSN
180 190 200 210
>>XP_011523393 (OMIM: 604037) PREDICTED: ras-related pro (216 aa)
initn: 423 init1: 329 opt: 437 Z-score: 475.0 bits: 94.9 E(85289): 1e-19
Smith-Waterman score: 437; 39.7% identity (68.6% similar) in 204 aa overlap (9-206:22-215)
10 20 30 40
pF1KB5 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLT
.:...::.:.:::.::. ..:. .: . ..:::: :::
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 KEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL
. : .:: : ..:::::::::..::. .::::. ..:.:.: .:: .: :.
XP_011 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAF
:::: :. ... ::: :: . : : ..:::. . :.. ..::::: :.::.. :
XP_011 RQASP----NIVIALAGNKADLASKRAVEFQEAQAYA-DDNSLLFMETSAKTAMNVNEIF
130 140 150 160 170
170 180 190 200
pF1KB5 QTIARNALKQETEVELYNEFPEP-----IKLDKNDRAKASAESCSC
..::.. :.: . : : . :..:. :. : . ::
XP_011 MAIAKKLPKNEPQ----NATGAPGRNRGVDLQENNPASRS-QCCSN
180 190 200 210
>>NP_958842 (OMIM: 604037) ras-related protein Rab-5C is (216 aa)
initn: 423 init1: 329 opt: 437 Z-score: 475.0 bits: 94.9 E(85289): 1e-19
Smith-Waterman score: 437; 39.7% identity (68.6% similar) in 204 aa overlap (9-206:22-215)
10 20 30 40
pF1KB5 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLT
.:...::.:.:::.::. ..:. .: . ..:::: :::
NP_958 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB5 KEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL
. : .:: : ..:::::::::..::. .::::. ..:.:.: .:: .: :.
NP_958 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB5 IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAF
:::: :. ... ::: :: . : : ..:::. . :.. ..::::: :.::.. :
NP_958 RQASP----NIVIALAGNKADLASKRAVEFQEAQAYA-DDNSLLFMETSAKTAMNVNEIF
130 140 150 160 170
170 180 190 200
pF1KB5 QTIARNALKQETEVELYNEFPEP-----IKLDKNDRAKASAESCSC
..::.. :.: . : : . :..:. :. : . ::
NP_958 MAIAKKLPKNEPQ----NATGAPGRNRGVDLQENNPASRS-QCCSN
180 190 200 210
>>NP_001238968 (OMIM: 604037) ras-related protein Rab-5C (249 aa)
initn: 423 init1: 329 opt: 437 Z-score: 474.3 bits: 95.0 E(85289): 1.1e-19
Smith-Waterman score: 437; 39.7% identity (68.6% similar) in 204 aa overlap (9-206:55-248)
10 20 30
pF1KB5 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYK
.:...::.:.:::.::. ..:. .: . .
NP_001 LWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQE
30 40 50 60 70 80
40 50 60 70 80 90
pF1KB5 ATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKT
.:::: :::. : .:: : ..:::::::::..::. .::::. ..:.:.: .::
NP_001 STIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR
90 100 110 120 130 140
100 110 120 130 140 150
pF1KB5 LDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAK
.: :. :::: :. ... ::: :: . : : ..:::. . :.. ..:::::
NP_001 AKNWVKELQRQASP----NIVIALAGNKADLASKRAVEFQEAQAYA-DDNSLLFMETSAK
150 160 170 180 190
160 170 180 190 200
pF1KB5 EAINVEQAFQTIARNALKQETEVELYNEFPEP-----IKLDKNDRAKASAESCSC
:.::.. :..::.. :.: . : : . :..:. :. : . ::
NP_001 TAMNVNEIFMAIAKKLPKNEPQ----NATGAPGRNRGVDLQENNPASRS-QCCSN
200 210 220 230 240
207 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 17:21:05 2016 done: Thu Nov 3 17:21:06 2016
Total Scan time: 5.590 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]