Result of FASTA (nr) for
pFN21AB5244
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5244, 356 aa
1>>>pF1KB5244 356 - 356 aa - 356 aa
Library: nr
8900870272 residues in 25779625 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.3229+/-0.000186; mu= 2.3427+/- 0.010
mean_var=141.1192+/-26.708, 0's: 33 Z-trim(122.6): 101 B-trim: 2 in 1/64
Lambda= 0.107965
statistics sampled from 60000 (158211) to 8486124 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.33), width: 16
Scan time: 1060.680
The best scores are: opt bits E(25779625)
gi|121114306|ref|NP_002491.2| neurogenic different ( 356) 2437 391.0 6.5e-106
gi|54696326|gb|AAV38535.1| neurogenic differentiat ( 357) 2437 391.0 6.5e-106
gi|311033428|sp|Q13562.3|NDF1_HUMAN RecName: Full= ( 356) 2432 390.2 1.1e-105
gi|410968948|ref|XP_003990961.1| PREDICTED: neurog ( 356) 2432 390.2 1.1e-105
gi|1841344|dbj|BAA11558.1| NeuroD [Homo sapiens] g ( 356) 2432 390.2 1.1e-105
gi|332209496|ref|XP_003253850.1| PREDICTED: neurog ( 356) 2431 390.1 1.2e-105
gi|344268782|ref|XP_003406235.1| PREDICTED: neurog ( 356) 2431 390.1 1.2e-105
gi|1245455|gb|AAA93480.1| NEUROD [Homo sapiens] ( 356) 2429 389.7 1.5e-105
gi|478504915|ref|XP_004426754.1| PREDICTED: neurog ( 356) 2428 389.6 1.7e-105
gi|4115808|dbj|BAA36519.1| BETA2 [Homo sapiens] ( 356) 2428 389.6 1.7e-105
gi|338715603|ref|XP_001497909.3| PREDICTED: hypoth ( 994) 2432 390.4 2.8e-105
gi|60813534|gb|AAX36264.1| neurogenic differentiat ( 356) 2423 388.8 3e-105
gi|301773802|ref|XP_002922319.1| PREDICTED: neurog ( 356) 2421 388.5 3.7e-105
gi|335303088|ref|XP_003359626.1| PREDICTED: neurog ( 356) 2421 388.5 3.7e-105
gi|472345363|ref|XP_004392421.1| PREDICTED: neurog ( 356) 2416 387.7 6.3e-105
gi|395837167|ref|XP_003791512.1| PREDICTED: neurog ( 356) 2416 387.7 6.3e-105
gi|471369999|ref|XP_004375513.1| PREDICTED: neurog ( 356) 2414 387.4 7.8e-105
gi|444723078|gb|ELW63742.1| Neurogenic differentia ( 356) 2413 387.3 8.7e-105
gi|465995266|ref|XP_004267436.1| PREDICTED: neurog ( 356) 2411 386.9 1.1e-104
gi|488583065|ref|XP_004476933.1| PREDICTED: neurog ( 356) 2408 386.5 1.5e-104
gi|296490714|tpg|DAA32827.1| TPA: neurogenic diffe ( 356) 2405 386.0 2.1e-104
gi|426222459|ref|XP_004005409.1| PREDICTED: unchar ( 823) 2405 386.1 4.4e-104
gi|157074092|ref|NP_001096758.1| neurogenic differ ( 356) 2393 384.1 7.5e-104
gi|344248704|gb|EGW04808.1| Neurogenic differentia ( 355) 2392 384.0 8.4e-104
gi|9506915|ref|NP_062091.1| neurogenic differentia ( 357) 2389 383.5 1.2e-103
gi|354479981|ref|XP_003502187.1| PREDICTED: neurog ( 561) 2392 384.0 1.3e-103
gi|33563268|ref|NP_035024.1| neurogenic differenti ( 357) 2382 382.4 2.5e-103
gi|432107277|gb|ELK32691.1| Neurogenic differentia ( 357) 2379 382.0 3.4e-103
gi|348585575|ref|XP_003478547.1| PREDICTED: neurog ( 355) 2377 381.6 4.2e-103
gi|26389367|dbj|BAC25725.1| unnamed protein produc ( 357) 2364 379.6 1.7e-102
gi|431894964|gb|ELK04757.1| Neurogenic differentia ( 362) 2363 379.5 2e-102
gi|2498619|sp|Q60430.2|NDF1_MESAU RecName: Full=Ne ( 355) 2361 379.2 2.4e-102
gi|777419|gb|AAA86518.1| beta-cell E-box transcrip ( 381) 2361 379.2 2.5e-102
gi|395519878|ref|XP_003764068.1| PREDICTED: neurog ( 357) 2349 377.3 8.7e-102
gi|334330295|ref|XP_001377765.2| PREDICTED: neurog ( 356) 2343 376.4 1.7e-101
gi|351706250|gb|EHB09169.1| Neurogenic differentia ( 356) 2342 376.2 1.9e-101
gi|345797056|ref|XP_003434269.1| PREDICTED: LOW QU ( 519) 2290 368.2 7.1e-99
gi|465955275|gb|EMP26357.1| Neurogenic differentia ( 357) 2220 357.2 9.8e-96
gi|110748654|gb|ABG89871.1| neurogenic differentia ( 301) 2031 327.7 6.1e-87
gi|854739|gb|AAC52203.1| neurogenic differentiatio ( 285) 1904 307.9 5.2e-81
gi|147901450|ref|NP_001090868.1| neuronal differen ( 361) 1895 306.6 1.7e-80
gi|6166565|sp|P79765.1|NDF1_CHICK RecName: Full=Ne ( 357) 1881 304.4 7.7e-80
gi|148229074|ref|NP_001085596.1| neuronal differen ( 357) 1876 303.6 1.3e-79
gi|45382521|ref|NP_990251.1| neurogenic differenti ( 357) 1869 302.5 2.8e-79
gi|18859083|ref|NP_571053.1| neurogenic differenti ( 350) 1825 295.7 3.2e-77
gi|213514432|ref|NP_001133280.1| Neurogenic differ ( 354) 1820 294.9 5.5e-77
gi|148222631|ref|NP_001079263.1| neurogenic differ ( 352) 1811 293.5 1.5e-76
gi|225706908|gb|ACO09300.1| Neurogenic differentia ( 350) 1745 283.2 1.8e-73
gi|149022370|gb|EDL79264.1| neurogenic differentia ( 359) 1690 274.6 7e-71
gi|66735460|gb|AAY53912.1| neurogenic differentiat ( 228) 1548 252.5 2.1e-64
>>gi|121114306|ref|NP_002491.2| neurogenic differentiati (356 aa)
initn: 2437 init1: 2437 opt: 2437 Z-score: 2067.0 bits: 391.0 E(25779625): 6.5e-106
Smith-Waterman score: 2437; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB5 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|121 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|121 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|121 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|121 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|121 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|121 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
310 320 330 340 350
>>gi|54696326|gb|AAV38535.1| neurogenic differentiation (357 aa)
initn: 2437 init1: 2437 opt: 2437 Z-score: 2067.0 bits: 391.0 E(25779625): 6.5e-106
Smith-Waterman score: 2437; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB5 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|546 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|546 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|546 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|546 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|546 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|546 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHDL
310 320 330 340 350
>>gi|311033428|sp|Q13562.3|NDF1_HUMAN RecName: Full=Neur (356 aa)
initn: 2432 init1: 2432 opt: 2432 Z-score: 2062.8 bits: 390.2 E(25779625): 1.1e-105
Smith-Waterman score: 2432; 99.7% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB5 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
gi|311 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLETMNAEEDSLRNGGEEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|311 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|311 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|311 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|311 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|311 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
310 320 330 340 350
>>gi|410968948|ref|XP_003990961.1| PREDICTED: neurogenic (356 aa)
initn: 2432 init1: 2432 opt: 2432 Z-score: 2062.8 bits: 390.2 E(25779625): 1.1e-105
Smith-Waterman score: 2432; 99.7% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB5 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|410 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|410 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|410 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|410 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|410 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
gi|410 MHYPAATLAGAQSHGSIFSGAAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
310 320 330 340 350
>>gi|1841344|dbj|BAA11558.1| NeuroD [Homo sapiens] gi|64 (356 aa)
initn: 2432 init1: 2432 opt: 2432 Z-score: 2062.8 bits: 390.2 E(25779625): 1.1e-105
Smith-Waterman score: 2432; 99.7% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB5 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|184 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|184 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|184 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|184 TNLVGGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|184 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|184 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
310 320 330 340 350
>>gi|332209496|ref|XP_003253850.1| PREDICTED: neurogenic (356 aa)
initn: 2431 init1: 2431 opt: 2431 Z-score: 2061.9 bits: 390.1 E(25779625): 1.2e-105
Smith-Waterman score: 2431; 99.7% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB5 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
gi|332 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAVNAEEDSLRNGGEEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|332 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
310 320 330 340 350
>>gi|344268782|ref|XP_003406235.1| PREDICTED: neurogenic (356 aa)
initn: 2431 init1: 2431 opt: 2431 Z-score: 2061.9 bits: 390.1 E(25779625): 1.2e-105
Smith-Waterman score: 2431; 99.7% identity (99.7% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB5 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|344 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|344 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|344 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|344 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|344 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::
gi|344 MHYPAATLAGAQSHGSIFPGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
310 320 330 340 350
>>gi|1245455|gb|AAA93480.1| NEUROD [Homo sapiens] (356 aa)
initn: 2429 init1: 2429 opt: 2429 Z-score: 2060.2 bits: 389.7 E(25779625): 1.5e-105
Smith-Waterman score: 2429; 99.7% identity (99.7% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB5 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
:::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
gi|124 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEISRSGKSPDLVSFVQTLCKGLSQPT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
310 320 330 340 350
>>gi|478504915|ref|XP_004426754.1| PREDICTED: neurogenic (356 aa)
initn: 2428 init1: 2428 opt: 2428 Z-score: 2059.4 bits: 389.6 E(25779625): 1.7e-105
Smith-Waterman score: 2428; 99.4% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB5 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
gi|478 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASSSFPVHPYSYQSPGLPSPPYGTMDSSHVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
gi|478 MHYPAATLAGAQSHGSIFSGAAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
310 320 330 340 350
>>gi|4115808|dbj|BAA36519.1| BETA2 [Homo sapiens] (356 aa)
initn: 2428 init1: 2428 opt: 2428 Z-score: 2059.4 bits: 389.6 E(25779625): 1.7e-105
Smith-Waterman score: 2428; 99.7% identity (99.7% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KB5 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|411 MTKSYSESGLMGEPQPQGPPSWTDECLSSQDEEHEADKKEDDLEAMNAEEDSLRNGGEEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|411 DEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHGLNAA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|411 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKSPDLVSFVQTLCKGLSQPT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYGTMDSSHVF
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
gi|411 TNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHPYSYQSPGLPSPPYDTMDSSHVF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|411 HVKPPPHAYSAALEPFFESPLTDCTSPSFDGPLSPPLSINGNFSFKHEPSAEFEKNYAFT
250 260 270 280 290 300
310 320 330 340 350
pF1KB5 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|411 MHYPAATLAGAQSHGSIFSGTAAPRCEIPIDNIMSFDSHSHHERVMSAQLNAIFHD
310 320 330 340 350
356 residues in 1 query sequences
8900870272 residues in 25779625 library sequences
Tcomplib [36.3.4 Apr, 2011] (6 proc)
start: Mon May 27 02:46:39 2013 done: Mon May 27 02:49:25 2013
Total Scan time: 1060.680 Total Display time: -2.010
Function used was FASTA [36.3.4 Apr, 2011]