Result of FASTA (omim) for pFN21AB4115
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4115, 938 aa
  1>>>pF1KB4115 938 - 938 aa - 938 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.7302+/-0.000457; mu= 11.0535+/- 0.028
 mean_var=197.8206+/-40.509, 0's: 0 Z-trim(117.0): 144  B-trim: 1329 in 1/51
 Lambda= 0.091188
 statistics sampled from 28465 (28617) to 28465 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.675), E-opt: 0.2 (0.336), width:  16
 Scan time: 14.780

The best scores are:                                      opt bits E(85289)
NP_987095 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 6322 845.4       0
XP_016879600 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 6322 845.4       0
XP_006721720 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 6322 845.4       0
NP_031398 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 6322 845.4       0
XP_016879601 (OMIM: 613369) PREDICTED: ATP-depende ( 775) 5214 699.6 1.6e-200
XP_011522561 (OMIM: 613369) PREDICTED: ATP-depende ( 674) 4520 608.2 4.3e-173
NP_001091974 (OMIM: 608469) probable ATP-dependent ( 731) 1253 178.5 1.1e-43
NP_006377 (OMIM: 608469) probable ATP-dependent RN ( 729) 1245 177.4 2.3e-43
NP_004387 (OMIM: 180630) probable ATP-dependent RN ( 614) 1231 175.5 7.2e-43
NP_001307525 (OMIM: 180630) probable ATP-dependent ( 614) 1231 175.5 7.2e-43
NP_001307524 (OMIM: 180630) probable ATP-dependent ( 614) 1231 175.5 7.2e-43
NP_001307526 (OMIM: 180630) probable ATP-dependent ( 614) 1231 175.5 7.2e-43
XP_011534228 (OMIM: 606286) PREDICTED: probable AT ( 604) 1013 146.8 3.1e-34
XP_011534230 (OMIM: 606286) PREDICTED: probable AT ( 529) 1008 146.1 4.4e-34
XP_011534229 (OMIM: 606286) PREDICTED: probable AT ( 529) 1008 146.1 4.4e-34
NP_061135 (OMIM: 606286) probable ATP-dependent RN ( 648) 1008 146.2 5.1e-34
XP_016866492 (OMIM: 606286) PREDICTED: probable AT ( 439)  973 141.4 9.4e-33
XP_011541799 (OMIM: 605281) PREDICTED: probable AT ( 678)  876 128.8 8.9e-29
NP_001160006 (OMIM: 605281) probable ATP-dependent ( 575)  874 128.5 9.5e-29
NP_001136021 (OMIM: 605281) probable ATP-dependent ( 690)  874 128.6 1.1e-28
XP_011541797 (OMIM: 605281) PREDICTED: probable AT ( 698)  874 128.6 1.1e-28
NP_001160005 (OMIM: 605281) probable ATP-dependent ( 704)  874 128.6 1.1e-28
NP_077726 (OMIM: 605281) probable ATP-dependent RN ( 724)  874 128.6 1.1e-28
XP_011508337 (OMIM: 174300,615464) PREDICTED: prob ( 619)  823 121.8   1e-26
XP_016857921 (OMIM: 174300,615464) PREDICTED: prob ( 619)  823 121.8   1e-26
XP_016857920 (OMIM: 174300,615464) PREDICTED: prob ( 619)  823 121.8   1e-26
NP_001026895 (OMIM: 174300,615464) probable ATP-de ( 619)  823 121.8   1e-26
NP_001289481 (OMIM: 400010,415000) ATP-dependent R ( 657)  770 114.9 1.4e-24
NP_004651 (OMIM: 400010,415000) ATP-dependent RNA  ( 660)  770 114.9 1.4e-24
NP_001116137 (OMIM: 400010,415000) ATP-dependent R ( 660)  770 114.9 1.4e-24
XP_016884802 (OMIM: 300160,300958) PREDICTED: ATP- ( 476)  767 114.4 1.4e-24
NP_001180346 (OMIM: 300160,300958) ATP-dependent R ( 646)  767 114.5 1.8e-24
NP_001347 (OMIM: 300160,300958) ATP-dependent RNA  ( 662)  767 114.5 1.8e-24
XP_016884803 (OMIM: 300160,300958) PREDICTED: ATP- ( 475)  764 114.0 1.9e-24
NP_001180345 (OMIM: 300160,300958) ATP-dependent R ( 661)  764 114.1 2.4e-24
NP_057439 (OMIM: 615428) probable ATP-dependent RN ( 455)  759 113.3 2.9e-24
XP_011542194 (OMIM: 300160,300958) PREDICTED: ATP- ( 598)  743 111.3 1.5e-23
NP_001307110 (OMIM: 174300,615464) probable ATP-de ( 567)  740 110.9 1.9e-23
XP_006711625 (OMIM: 174300,615464) PREDICTED: prob ( 557)  738 110.6 2.3e-23
NP_057306 (OMIM: 608170,616871) probable ATP-depen ( 622)  737 110.5 2.7e-23
NP_001308661 (OMIM: 608170,616871) probable ATP-de ( 496)  724 108.7 7.4e-23
NP_001308759 (OMIM: 608170,616871) probable ATP-de ( 496)  724 108.7 7.4e-23
NP_060365 (OMIM: 616621) probable ATP-dependent RN ( 796)  720 108.4 1.5e-22
NP_001311124 (OMIM: 400010,415000) ATP-dependent R ( 637)  688 104.1 2.4e-21
NP_076977 (OMIM: 611665) ATP-dependent RNA helicas ( 881)  690 104.5 2.5e-21
NP_001104792 (OMIM: 611665) ATP-dependent RNA heli ( 882)  690 104.5 2.5e-21
NP_076950 (OMIM: 610373) ATP-dependent RNA helicas ( 737)  667 101.4 1.8e-20
XP_016872115 (OMIM: 610373) PREDICTED: ATP-depende ( 737)  667 101.4 1.8e-20
NP_055555 (OMIM: 268305,608546) eukaryotic initiat ( 411)  662 100.5 1.9e-20
XP_016872117 (OMIM: 610373) PREDICTED: ATP-depende ( 672)  655 99.8   5e-20


>>NP_987095 (OMIM: 613369) ATP-dependent RNA helicase DD  (938 aa)
 initn: 6322 init1: 6322 opt: 6322  Z-score: 4507.9  bits: 845.4 E(85289):    0
Smith-Waterman score: 6322; 100.0% identity (100.0% similar) in 938 aa overlap (1-938:1-938)

               10        20        30        40        50        60
pF1KB4 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB4 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB4 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB4 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB4 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB4 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_987 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
              850       860       870       880       890       900

              910       920       930        
pF1KB4 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
       ::::::::::::::::::::::::::::::::::::::
NP_987 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
              910       920       930        

>>XP_016879600 (OMIM: 613369) PREDICTED: ATP-dependent R  (938 aa)
 initn: 6322 init1: 6322 opt: 6322  Z-score: 4507.9  bits: 845.4 E(85289):    0
Smith-Waterman score: 6322; 100.0% identity (100.0% similar) in 938 aa overlap (1-938:1-938)

               10        20        30        40        50        60
pF1KB4 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB4 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB4 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB4 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB4 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB4 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
              850       860       870       880       890       900

              910       920       930        
pF1KB4 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
       ::::::::::::::::::::::::::::::::::::::
XP_016 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
              910       920       930        

>>XP_006721720 (OMIM: 613369) PREDICTED: ATP-dependent R  (938 aa)
 initn: 6322 init1: 6322 opt: 6322  Z-score: 4507.9  bits: 845.4 E(85289):    0
Smith-Waterman score: 6322; 100.0% identity (100.0% similar) in 938 aa overlap (1-938:1-938)

               10        20        30        40        50        60
pF1KB4 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB4 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB4 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB4 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB4 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB4 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
              850       860       870       880       890       900

              910       920       930        
pF1KB4 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
       ::::::::::::::::::::::::::::::::::::::
XP_006 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
              910       920       930        

>>NP_031398 (OMIM: 613369) ATP-dependent RNA helicase DD  (938 aa)
 initn: 6322 init1: 6322 opt: 6322  Z-score: 4507.9  bits: 845.4 E(85289):    0
Smith-Waterman score: 6322; 100.0% identity (100.0% similar) in 938 aa overlap (1-938:1-938)

               10        20        30        40        50        60
pF1KB4 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 MNWNKGGPGTKRGFGFGGFAISAGKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 KIGSKRANFDEENAYFEDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 AEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 LEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB4 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB4 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB4 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 RERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQK
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB4 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 AGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB4 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB4 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 GDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKM
              850       860       870       880       890       900

              910       920       930        
pF1KB4 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
       ::::::::::::::::::::::::::::::::::::::
NP_031 EPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
              910       920       930        

>>XP_016879601 (OMIM: 613369) PREDICTED: ATP-dependent R  (775 aa)
 initn: 5214 init1: 5214 opt: 5214  Z-score: 3721.2  bits: 699.6 E(85289): 1.6e-200
Smith-Waterman score: 5214; 100.0% identity (100.0% similar) in 775 aa overlap (164-938:1-775)

           140       150       160       170       180       190   
pF1KB4 LEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPT
                                     ::::::::::::::::::::::::::::::
XP_016                               MAENPTAGVVQEEEEDNLEYDSDGNPIAPT
                                             10        20        30

           200       210       220       230       240       250   
pF1KB4 KKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGS
               40        50        60        70        80        90

           260       270       280       290       300       310   
pF1KB4 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI
              100       110       120       130       140       150

           320       330       340       350       360       370   
pF1KB4 HIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKAL
              160       170       180       190       200       210

           380       390       400       410       420       430   
pF1KB4 QEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQ
              220       230       240       250       260       270

           440       450       460       470       480       490   
pF1KB4 TLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLV
              280       290       300       310       320       330

           500       510       520       530       540       550   
pF1KB4 EFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLV
              340       350       360       370       380       390

           560       570       580       590       600       610   
pF1KB4 ATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDL
              400       410       420       430       440       450

           620       630       640       650       660       670   
pF1KB4 VRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENMDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENMDR
              460       470       480       490       500       510

           680       690       700       710       720       730   
pF1KB4 GNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQKAGSSAAGASGWTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQKAGSSAAGASGWTS
              520       530       540       550       560       570

           740       750       760       770       780       790   
pF1KB4 AGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYPSAGAQGVNNTASG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYPSAGAQGVNNTASG
              580       590       600       610       620       630

           800       810       820       830       840       850   
pF1KB4 NNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRHGDGYRHPESSSRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRHGDGYRHPESSSRH
              640       650       660       670       680       690

           860       870       880       890       900       910   
pF1KB4 TDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKMEPKVDSSKMDKVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKMEPKVDSSKMDKVD
              700       710       720       730       740       750

           920       930        
pF1KB4 SKTDKTADGFAVPEPPKRKKSRWDS
       :::::::::::::::::::::::::
XP_016 SKTDKTADGFAVPEPPKRKKSRWDS
              760       770     

>>XP_011522561 (OMIM: 613369) PREDICTED: ATP-dependent R  (674 aa)
 initn: 4520 init1: 4520 opt: 4520  Z-score: 3228.5  bits: 608.2 E(85289): 4.3e-173
Smith-Waterman score: 4520; 100.0% identity (100.0% similar) in 674 aa overlap (265-938:1-674)

          240       250       260       270       280       290    
pF1KB4 LRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMI
                                     ::::::::::::::::::::::::::::::
XP_011                               MHQIRKSEYTQPTPIQCQGVPVALSGRDMI
                                             10        20        30

          300       310       320       330       340       350    
pF1KB4 GIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYN
               40        50        60        70        80        90

          360       370       380       390       400       410    
pF1KB4 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD
              100       110       120       130       140       150

          420       430       440       450       460       470    
pF1KB4 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI
              160       170       180       190       200       210

          480       490       500       510       520       530    
pF1KB4 VEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQ
              220       230       240       250       260       270

          540       550       560       570       580       590    
pF1KB4 SERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGE
              280       290       300       310       320       330

          600       610       620       630       640       650    
pF1KB4 KGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIG
              340       350       360       370       380       390

          660       670       680       690       700       710    
pF1KB4 GGGLGYRERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGGLGYRERPGLGSENMDRGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAA
              400       410       420       430       440       450

          720       730       740       750       760       770    
pF1KB4 SLSNQKAGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLSNQKAGSSAAGASGWTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISG
              460       470       480       490       500       510

          780       790       800       810       820       830    
pF1KB4 APVTYPSAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APVTYPSAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRH
              520       530       540       550       560       570

          840       850       860       870       880       890    
pF1KB4 GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRES
              580       590       600       610       620       630

          900       910       920       930        
pF1KB4 KMEPKMEPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
       ::::::::::::::::::::::::::::::::::::::::::::
XP_011 KMEPKMEPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS
              640       650       660       670    

>>NP_001091974 (OMIM: 608469) probable ATP-dependent RNA  (731 aa)
 initn: 1232 init1: 714 opt: 1253  Z-score: 905.3  bits: 178.5 E(85289): 1.1e-43
Smith-Waterman score: 1264; 36.2% identity (65.6% similar) in 639 aa overlap (174-789:88-707)

           150       160       170       180       190       200   
pF1KB4 VKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTKKIIDPLPPI
                                     .....:   . . :.   : ::. .:   .
NP_001 EPQALPSPAIRAPLPDLYPFGTMRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERL
        60        70        80        90       100       110       

           210          220       230       240        250         
pF1KB4 DHSEIDY---PPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGA-APPRPGSSFAHFG
        ... :    : :::::: :: :.. ::: .. .::.: .. : :. . :.:  .: : .
NP_001 RKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHAN
       120       130       140       150       160       170       

     260       270       280       290       300       310         
pF1KB4 FDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK
       : . .:  .  ...:.:::::::: :.:::::::.:::.:::::: :.. : ..::  : 
NP_001 FPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQP
       180       190       200       210       220       230       

     320       330       340       350       360       370         
pF1KB4 ELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEI
        :: ::::: ... ::::: ::..     .::   :.:. .:::.    : . :..:.::
NP_001 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI
       240       250       260       270       280       290       

     380       390       400       410       420       430         
pF1KB4 VVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSA
        . ::::::: ...  :::.: .:::.::::::.::::: :.:.:....:::::::..::
NP_001 CIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA
       300       310       320       330       340       350       

     440       450       460        470       480       490        
pF1KB4 TFRKKIEKLARDILIDPIRVVQGDIG-EANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS
       :. :....::.:.: :  ..  :..   ::... :::..   .  : . : . . :. . 
NP_001 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESE-KDHKLIQLMEEIMAE
       360       370       380       390       400        410      

        500       510       520       530       540       550      
pF1KB4 --GSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATD
         .....::  :   ..:.  ....:     .::: .: ::. :...:..   :.:.:::
NP_001 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD
        420       430       440       450       460       470      

        560       570       580       590       600       610      
pF1KB4 VAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRN
       ::.::::. ..: :::::   . . ..::::::.:. .::.:::..:: . . : .:.. 
NP_001 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV
        480       490       500       510       520       530      

        620       630       640       650       660       670      
pF1KB4 LEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSENM---DR
       :: ::: .. .:..:.         :  :: : :    ::   ::   . .. :.   :.
NP_001 LEEANQAINPKLMQLV-------DHRGGGGGGGK----GGRSRYRTTSSANNPNLMYQDE
        540       550              560           570       580     

           680       690       700            710           720    
pF1KB4 GNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQ--SQY---KSHFVAA----SLSNQKAGSS
        .  . .  .. . ..... ::  . .:..   : :   .: : :     . ..   :..
NP_001 CDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAA
         590       600       610       620       630       640     

          730           740       750       760       770       780
pF1KB4 AAGASGWTS----AGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTYP
       : :.:..:.    ::. ..  :.:.  :..:      :... . :.: .:.     ..  
NP_001 AYGTSSYTAQEYGAGTYGASSTTST--GRSSQ-----SSSQQFSGIGRSGQQPQPLMSQQ
         650       660       670              680       690        

              790       800       810       820       830       840
pF1KB4 SAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRH
        :   :..:                                                   
NP_001 FAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK                           
      700       710       720       730                            

>>NP_006377 (OMIM: 608469) probable ATP-dependent RNA he  (729 aa)
 initn: 1228 init1: 714 opt: 1245  Z-score: 899.6  bits: 177.4 E(85289): 2.3e-43
Smith-Waterman score: 1265; 36.1% identity (65.9% similar) in 640 aa overlap (174-789:88-705)

           150       160       170       180       190       200   
pF1KB4 VKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTKKIIDPLPPI
                                     .....:   . . :.   : ::. .:   .
NP_006 EPQALPSPAIRAPLPDLYPFGTMRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERL
        60        70        80        90       100       110       

           210          220       230       240        250         
pF1KB4 DHSEIDY---PPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGA-APPRPGSSFAHFG
        ... :    : :::::: :: :.. ::: .. .::.: .. : :. . :.:  .: : .
NP_006 RKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHAN
       120       130       140       150       160       170       

     260       270       280       290       300       310         
pF1KB4 FDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK
       : . .:  .  ...:.:::::::: :.:::::::.:::.:::::: :.. : ..::  : 
NP_006 FPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQP
       180       190       200       210       220       230       

     320       330       340       350       360       370         
pF1KB4 ELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEI
        :: ::::: ... ::::: ::..     .::   :.:. .:::.    : . :..:.::
NP_006 YLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEI
       240       250       260       270       280       290       

     380       390       400       410       420       430         
pF1KB4 VVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSA
        . ::::::: ...  :::.: .:::.::::::.::::: :.:.:....:::::::..::
NP_006 CIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA
       300       310       320       330       340       350       

     440       450       460        470       480       490        
pF1KB4 TFRKKIEKLARDILIDPIRVVQGDIG-EANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS
       :. :....::.:.: :  ..  :..   ::... :::..   .  : . : . . :. . 
NP_006 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESE-KDHKLIQLMEEIMAE
       360       370       380       390       400        410      

        500       510       520       530       540       550      
pF1KB4 --GSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATD
         .....::  :   ..:.  ....:     .::: .: ::. :...:..   :.:.:::
NP_006 KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD
        420       430       440       450       460       470      

        560       570       580       590       600       610      
pF1KB4 VAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRN
       ::.::::. ..: :::::   . . ..::::::.:. .::.:::..:: . . : .:.. 
NP_006 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKV
        480       490       500       510       520       530      

        620       630       640       650        660       670     
pF1KB4 LEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLG-YRERPGLGSENM---D
       :: ::: .. .:..:. .         .:: :     :::: . ::   . .. :.   :
NP_006 LEEANQAINPKLMQLVDH---------RGGGG-----GGGGRSRYRTTSSANNPNLMYQD
        540       550                     560       570       580  

            680       690       700            710           720   
pF1KB4 RGNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQ--SQY---KSHFVAA----SLSNQKAGS
       . .  . .  .. . ..... ::  . .:..   : :   .: : :     . ..   :.
NP_006 ECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGA
            590       600       610       620       630       640  

           730           740       750       760       770         
pF1KB4 SAAGASGWTS----AGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISGAPVTY
       .: :.:..:.    ::. ..  :.:.  :..:      :... . :.: .:.     .. 
NP_006 AAYGTSSYTAQEYGAGTYGASSTTST--GRSSQ-----SSSQQFSGIGRSGQQPQPLMSQ
            650       660         670            680       690     

     780       790       800       810       820       830         
pF1KB4 PSAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGR
         :   :..:                                                  
NP_006 QFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK                          
         700       710       720                                   

>>NP_004387 (OMIM: 180630) probable ATP-dependent RNA he  (614 aa)
 initn: 1147 init1: 790 opt: 1231  Z-score: 890.6  bits: 175.5 E(85289): 7.2e-43
Smith-Waterman score: 1231; 37.3% identity (67.9% similar) in 585 aa overlap (192-764:37-607)

             170       180       190       200       210       220 
pF1KB4 RYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEH
                                     : .:..     .:    . : ::::::.::
NP_004 DRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLD----ELPKFEKNFYQEH
         10        20        30        40            50        60  

             230       240       250       260       270       280 
pF1KB4 EEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQC
        ...  : :..   :.. .. : :   :.:  .: . .:  ..:  : ....:.:: :: 
NP_004 PDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQA
             70        80        90       100       110       120  

             290       300       310       320       330       340 
pF1KB4 QGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQ
       :: :::::: ::.:.:.:::::: ... : ..::  :  :: ::::: ... ::::: ::
NP_004 QGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQ
            130       140       150       160       170       180  

             350       360       370       380       390       400 
pF1KB4 IHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRV
       ..    .. .:  :.:. .:::.    : . :..:.:: . ::::::: ..   :::.:.
NP_004 VQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRT
            190       200       210       220       230       240  

             410       420       430       440       450       460 
pF1KB4 SYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQ
       .:::.::::::.::::: :.:.:....:::::::..:::. :....::.:.: : :..  
NP_004 TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINI
            250       260       270       280       290       300  

              470       480       490         500       510        
pF1KB4 GDIG-EANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GSVLLFVTKKANAEELANNL
       : .   ::... :::.. :.   : . : : . :. :   .....::  :   .::. ..
NP_004 GALELSANHNILQIVDVCHD-VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKM
            310       320        330       340       350       360 

      520       530       540       550       560       570        
pF1KB4 KQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARD
       ...:     .::: .:.::. :...::.   :.:.:::::.::::. ..: :::::   .
NP_004 RRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNS
             370       380       390       400       410       420 

      580       590       600       610       620       630        
pF1KB4 IDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWF
        . . ::::::.:. . :.:::..::.. . ..::.  :. ::: .. .::.: ...   
NP_004 SEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQL-VEDRGS
             430       440       450       460       470        480

      640           650         660       670       680       690  
pF1KB4 RKSRFKGG----KGKKLNIG--GGGLGYRERPGLGSENMDRGNNNVMSNYEAYKPSTGAM
        .:: .::    .  . . :  ::   .:.:     ::.::: .....   . : ..:..
NP_004 GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDR-----ENYDRGYSSLLKRDFGAKTQNGVY
              490       500       510            520       530     

            700       710        720       730       740       750 
pF1KB4 GDRLTAMKAAFQSQYKSHFVAASL-SNQKAGSSAAGASGWTSAGSLNSVPTNSAQQGHNS
       .   .  ...: :.. :  . .:. ... .:.   : ..  . ::  .::.    .....
NP_004 SAA-NYTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGS--NVPNMHNGMNQQA
          540       550       560       570         580       590  

             760         770       780       790       800         
pF1KB4 PDSPVTSAAK--GIPGFGNTGNISGAPVTYPSAGAQGVNNTASGNNSREGTGGSNGKRER
          :.:.::   : :                                             
NP_004 YAYPATAAAPMIGYPMPTGYSQ                                      
            600       610                                          

>>NP_001307525 (OMIM: 180630) probable ATP-dependent RNA  (614 aa)
 initn: 1147 init1: 790 opt: 1231  Z-score: 890.6  bits: 175.5 E(85289): 7.2e-43
Smith-Waterman score: 1231; 37.3% identity (67.9% similar) in 585 aa overlap (192-764:37-607)

             170       180       190       200       210       220 
pF1KB4 RYMAENPTAGVVQEEEEDNLEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEH
                                     : .:..     .:    . : ::::::.::
NP_001 DRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLD----ELPKFEKNFYQEH
         10        20        30        40            50        60  

             230       240       250       260       270       280 
pF1KB4 EEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQC
        ...  : :..   :.. .. : :   :.:  .: . .:  ..:  : ....:.:: :: 
NP_001 PDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQA
             70        80        90       100       110       120  

             290       300       310       320       330       340 
pF1KB4 QGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQ
       :: :::::: ::.:.:.:::::: ... : ..::  :  :: ::::: ... ::::: ::
NP_001 QGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQ
            130       140       150       160       170       180  

             350       360       370       380       390       400 
pF1KB4 IHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRV
       ..    .. .:  :.:. .:::.    : . :..:.:: . ::::::: ..   :::.:.
NP_001 VQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRT
            190       200       210       220       230       240  

             410       420       430       440       450       460 
pF1KB4 SYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQ
       .:::.::::::.::::: :.:.:....:::::::..:::. :....::.:.: : :..  
NP_001 TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINI
            250       260       270       280       290       300  

              470       480       490         500       510        
pF1KB4 GDIG-EANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GSVLLFVTKKANAEELANNL
       : .   ::... :::.. :.   : . : : . :. :   .....::  :   .::. ..
NP_001 GALELSANHNILQIVDVCHD-VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKM
            310       320        330       340       350       360 

      520       530       540       550       560       570        
pF1KB4 KQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARD
       ...:     .::: .:.::. :...::.   :.:.:::::.::::. ..: :::::   .
NP_001 RRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNS
             370       380       390       400       410       420 

      580       590       600       610       620       630        
pF1KB4 IDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWF
        . . ::::::.:. . :.:::..::.. . ..::.  :. ::: .. .::.: ...   
NP_001 SEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQL-VEDRGS
             430       440       450       460       470        480

      640           650         660       670       680       690  
pF1KB4 RKSRFKGG----KGKKLNIG--GGGLGYRERPGLGSENMDRGNNNVMSNYEAYKPSTGAM
        .:: .::    .  . . :  ::   .:.:     ::.::: .....   . : ..:..
NP_001 GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDR-----ENYDRGYSSLLKRDFGAKTQNGVY
              490       500       510            520       530     

            700       710        720       730       740       750 
pF1KB4 GDRLTAMKAAFQSQYKSHFVAASL-SNQKAGSSAAGASGWTSAGSLNSVPTNSAQQGHNS
       .   .  ...: :.. :  . .:. ... .:.   : ..  . ::  .::.    .....
NP_001 SAA-NYTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGS--NVPNMHNGMNQQA
          540       550       560       570         580       590  

             760         770       780       790       800         
pF1KB4 PDSPVTSAAK--GIPGFGNTGNISGAPVTYPSAGAQGVNNTASGNNSREGTGGSNGKRER
          :.:.::   : :                                             
NP_001 YAYPATAAAPMIGYPMPTGYSQ                                      
            600       610                                          




938 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 14:25:17 2016 done: Thu Nov  3 14:25:20 2016
 Total Scan time: 14.780 Total Display time:  0.300

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com