Result of FASTA (omim) for pFN21AB3912
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3912, 153 aa
  1>>>pF1KB3912 153 - 153 aa - 153 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8123+/-0.0003; mu= 14.6133+/- 0.019
 mean_var=63.8017+/-12.995, 0's: 0 Z-trim(117.4): 38  B-trim: 0 in 0/53
 Lambda= 0.160568
 statistics sampled from 29361 (29411) to 29361 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.345), width:  16
 Scan time:  5.430

The best scores are:                                      opt bits E(85289)
NP_000609 (OMIM: 147440,608747) insulin-like growt ( 153) 1058 253.0 1.4e-67
NP_001104753 (OMIM: 147440,608747) insulin-like gr ( 158)  934 224.3 6.4e-59
NP_001104755 (OMIM: 147440,608747) insulin-like gr ( 195)  934 224.3 7.5e-59
NP_001104754 (OMIM: 147440,608747) insulin-like gr ( 137)  902 216.8 9.7e-57
XP_016874752 (OMIM: 147440,608747) PREDICTED: insu ( 170)  903 217.1 9.8e-57
XP_016874751 (OMIM: 147440,608747) PREDICTED: insu ( 175)  779 188.4 4.4e-48
XP_016874748 (OMIM: 147440,608747) PREDICTED: insu ( 212)  779 188.5 5.2e-48
XP_016874750 (OMIM: 147440,608747) PREDICTED: insu ( 179)  778 188.2 5.3e-48
NP_001007140 (OMIM: 130650,147470,180860,194070,61 ( 180)  317 81.4 7.5e-16
NP_000603 (OMIM: 130650,147470,180860,194070,61648 ( 180)  317 81.4 7.5e-16
NP_001278791 (OMIM: 130650,147470,180860,194070,61 ( 180)  317 81.4 7.5e-16
NP_001278790 (OMIM: 130650,147470,180860,194070,61 ( 180)  317 81.4 7.5e-16
NP_001121070 (OMIM: 130650,147470,180860,194070,61 ( 236)  317 81.5 9.2e-16


>>NP_000609 (OMIM: 147440,608747) insulin-like growth fa  (153 aa)
 initn: 1058 init1: 1058 opt: 1058  Z-score: 1334.3  bits: 253.0 E(85289): 1.4e-67
Smith-Waterman score: 1058; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153)

               10        20        30        40        50        60
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
               70        80        90       100       110       120

              130       140       150   
pF1KB3 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
       :::::::::::::::::::::::::::::::::
NP_000 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
              130       140       150   

>>NP_001104753 (OMIM: 147440,608747) insulin-like growth  (158 aa)
 initn: 934 init1: 934 opt: 934  Z-score: 1178.8  bits: 224.3 E(85289): 6.4e-59
Smith-Waterman score: 934; 100.0% identity (100.0% similar) in 134 aa overlap (1-134:1-134)

               10        20        30        40        50        60
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
               70        80        90       100       110       120

              130       140       150        
pF1KB3 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM     
       ::::::::::::::                        
NP_001 VRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGSTFEERK
              130       140       150        

>>NP_001104755 (OMIM: 147440,608747) insulin-like growth  (195 aa)
 initn: 934 init1: 934 opt: 934  Z-score: 1177.6  bits: 224.3 E(85289): 7.5e-59
Smith-Waterman score: 934; 100.0% identity (100.0% similar) in 134 aa overlap (1-134:1-134)

               10        20        30        40        50        60
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
               70        80        90       100       110       120

              130       140       150                              
pF1KB3 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM                           
       ::::::::::::::                                              
NP_001 VRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIRGKKKEQRR
              130       140       150       160       170       180

>>NP_001104754 (OMIM: 147440,608747) insulin-like growth  (137 aa)
 initn: 902 init1: 902 opt: 902  Z-score: 1139.6  bits: 216.8 E(85289): 9.7e-57
Smith-Waterman score: 902; 100.0% identity (100.0% similar) in 132 aa overlap (22-153:6-137)

               10        20        30        40        50        60
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
                            :::::::::::::::::::::::::::::::::::::::
NP_001                 MITPTVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
                               10        20        30        40    

               70        80        90       100       110       120
pF1KB3 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
           50        60        70        80        90       100    

              130       140       150   
pF1KB3 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
       :::::::::::::::::::::::::::::::::
NP_001 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
          110       120       130       

>>XP_016874752 (OMIM: 147440,608747) PREDICTED: insulin-  (170 aa)
 initn: 903 init1: 903 opt: 903  Z-score: 1139.6  bits: 217.1 E(85289): 9.8e-57
Smith-Waterman score: 903; 99.2% identity (100.0% similar) in 133 aa overlap (21-153:38-170)

                         10        20        30        40        50
pF1KB3           MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGP
                                     .:::::::::::::::::::::::::::::
XP_016 HVEKKKKKKFKVQVISTTPGKPGLESSLGKEVKMHTMSSSHLFYLALCLLTFTSSATAGP
        10        20        30        40        50        60       

               60        70        80        90       100       110
pF1KB3 ETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCA
        70        80        90       100       110       120       

              120       130       140       150   
pF1KB3 PLKPAKSARSVRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
       :::::::::::::::::::::::::::::::::::::::::::
XP_016 PLKPAKSARSVRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM
       130       140       150       160       170

>>XP_016874751 (OMIM: 147440,608747) PREDICTED: insulin-  (175 aa)
 initn: 779 init1: 779 opt: 779  Z-score: 984.2  bits: 188.4 E(85289): 4.4e-48
Smith-Waterman score: 779; 99.1% identity (100.0% similar) in 114 aa overlap (21-134:38-151)

                         10        20        30        40        50
pF1KB3           MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGP
                                     .:::::::::::::::::::::::::::::
XP_016 HVEKKKKKKFKVQVISTTPGKPGLESSLGKEVKMHTMSSSHLFYLALCLLTFTSSATAGP
        10        20        30        40        50        60       

               60        70        80        90       100       110
pF1KB3 ETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCA
        70        80        90       100       110       120       

              120       130       140       150        
pF1KB3 PLKPAKSARSVRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM     
       ::::::::::::::::::::::::                        
XP_016 PLKPAKSARSVRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGSTFEERK
       130       140       150       160       170     

>>XP_016874748 (OMIM: 147440,608747) PREDICTED: insulin-  (212 aa)
 initn: 779 init1: 779 opt: 779  Z-score: 983.0  bits: 188.5 E(85289): 5.2e-48
Smith-Waterman score: 779; 99.1% identity (100.0% similar) in 114 aa overlap (21-134:38-151)

                         10        20        30        40        50
pF1KB3           MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGP
                                     .:::::::::::::::::::::::::::::
XP_016 HVEKKKKKKFKVQVISTTPGKPGLESSLGKEVKMHTMSSSHLFYLALCLLTFTSSATAGP
        10        20        30        40        50        60       

               60        70        80        90       100       110
pF1KB3 ETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ETLCGAELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCA
        70        80        90       100       110       120       

              120       130       140       150                    
pF1KB3 PLKPAKSARSVRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM                 
       ::::::::::::::::::::::::                                    
XP_016 PLKPAKSARSVRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQ
       130       140       150       160       170       180       

>>XP_016874750 (OMIM: 147440,608747) PREDICTED: insulin-  (179 aa)
 initn: 778 init1: 778 opt: 778  Z-score: 982.8  bits: 188.2 E(85289): 5.3e-48
Smith-Waterman score: 778; 100.0% identity (100.0% similar) in 113 aa overlap (22-134:6-118)

               10        20        30        40        50        60
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
                            :::::::::::::::::::::::::::::::::::::::
XP_016                 MITPTVKMHTMSSSHLFYLALCLLTFTSSATAGPETLCGAELVD
                               10        20        30        40    

               70        80        90       100       110       120
pF1KB3 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKSARS
           50        60        70        80        90       100    

              130       140       150                              
pF1KB3 VRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM                           
       ::::::::::::::                                              
XP_016 VRAQRHTDMPKTQKYQPPSTNKNTKSQRRKGWPKTHPGGEQKEGTEASLQIRGKKKEQRR
          110       120       130       140       150       160    

>>NP_001007140 (OMIM: 130650,147470,180860,194070,616489  (180 aa)
 initn: 319 init1: 168 opt: 317  Z-score: 405.6  bits: 81.4 E(85289): 7.5e-16
Smith-Waterman score: 317; 58.2% identity (74.5% similar) in 98 aa overlap (27-121:5-94)

               10        20        30        40          50        
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAG--P-ETLCGAE
                                 :..: :  :..  :.:.:   :.  : :::::.:
NP_001                       MGIPMGKSMLVLLTF--LAFASCCIAAYRPSETLCGGE
                                     10          20        30      

        60        70        80        90       100       110       
pF1KB3 LVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKS
       :::.::::::::::::..:..    :::.   :::.:::::::::  :: :::   ::::
NP_001 LVDTLQFVCGDRGFYFSRPASR--VSRRS--RGIVEECCFRSCDLALLETYCA--TPAKS
         40        50          60          70        80          90

       120       130       140       150                           
pF1KB3 ARSVRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM                        
        :.:                                                        
NP_001 ERDVSTPPTVLPDNFPRYPVGKFFQYDTWKQSTQRLRRGLPALLRARRGHVLAKELEAFR
              100       110       120       130       140       150

>>NP_000603 (OMIM: 130650,147470,180860,194070,616489) i  (180 aa)
 initn: 319 init1: 168 opt: 317  Z-score: 405.6  bits: 81.4 E(85289): 7.5e-16
Smith-Waterman score: 317; 58.2% identity (74.5% similar) in 98 aa overlap (27-121:5-94)

               10        20        30        40          50        
pF1KB3 MGKISSLPTQLFKCCFCDFLKVKMHTMSSSHLFYLALCLLTFTSSATAG--P-ETLCGAE
                                 :..: :  :..  :.:.:   :.  : :::::.:
NP_000                       MGIPMGKSMLVLLTF--LAFASCCIAAYRPSETLCGGE
                                     10          20        30      

        60        70        80        90       100       110       
pF1KB3 LVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMYCAPLKPAKS
       :::.::::::::::::..:..    :::.   :::.:::::::::  :: :::   ::::
NP_000 LVDTLQFVCGDRGFYFSRPASR--VSRRS--RGIVEECCFRSCDLALLETYCA--TPAKS
         40        50          60          70        80          90

       120       130       140       150                           
pF1KB3 ARSVRAQRHTDMPKTQKEVHLKNASRGSAGNKNYRM                        
        :.:                                                        
NP_000 ERDVSTPPTVLPDNFPRYPVGKFFQYDTWKQSTQRLRRGLPALLRARRGHVLAKELEAFR
              100       110       120       130       140       150




153 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 14:10:09 2016 done: Thu Nov  3 14:10:10 2016
 Total Scan time:  5.430 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com