Result of FASTA (omim) for
pFN21AB3047
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3047, 1147 aa
1>>>pF1KB3047 1147 - 1147 aa - 1147 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.4224+/-0.000557; mu= 2.6746+/- 0.035
mean_var=214.2378+/-42.439, 0's: 0 Z-trim(114.1): 72 B-trim: 539 in 1/53
Lambda= 0.087625
statistics sampled from 23676 (23744) to 23676 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.614), E-opt: 0.2 (0.278), width: 16
Scan time: 14.870
The best scores are: opt bits E(85289)
NP_002904 (OMIM: 102579) replication factor C subu (1147) 7384 947.7 0
NP_001191676 (OMIM: 102579) replication factor C s (1148) 7372 946.2 0
XP_016864017 (OMIM: 102579) PREDICTED: replication (1121) 5919 762.5 0
XP_011512032 (OMIM: 102579) PREDICTED: replication (1122) 5896 759.6 2.4e-218
XP_011512033 (OMIM: 102579) PREDICTED: replication ( 978) 3274 428.1 1.3e-118
XP_011528502 (OMIM: 105400,162230,616924) PREDICTE ( 924) 266 47.8 0.00036
NP_066554 (OMIM: 105400,162230,616924) neurofilame (1020) 240 44.6 0.0038
>>NP_002904 (OMIM: 102579) replication factor C subunit (1147 aa)
initn: 7384 init1: 7384 opt: 7384 Z-score: 5057.6 bits: 947.7 E(85289): 0
Smith-Waterman score: 7384; 100.0% identity (100.0% similar) in 1147 aa overlap (1-1147:1-1147)
10 20 30 40 50 60
pF1KB3 MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIKVNSSRKEDDFKQKQPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIKVNSSRKEDDFKQKQPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGKISRQDPVTYISETDEEDDFMCKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGKISRQDPVTYISETDEEDDFMCKK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 AASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 AASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 MVASKRKELSQNTDESGLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MVASKRKELSQNTDESGLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 ARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQHS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 KSSADKIGEVSSPKASSKLAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KSSADKIGEVSSPKASSKLAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 TMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSRPTSKRDSLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSRPTSKRDSLAK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 TIKKETDVFWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TIKKETDVFWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KB3 QQGDQSCANKLLRWLRNWQKSSSEDKKHAKFGKFSGKDDGSSFKAALLSGPPGVGKTTTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QQGDQSCANKLLRWLRNWQKSSSEDKKHAKFGKFSGKDDGSSFKAALLSGPPGVGKTTTA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KB3 SLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KB3 VDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 VDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIK
730 740 750 760 770 780
790 800 810 820 830 840
pF1KB3 GAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAK
790 800 810 820 830 840
850 860 870 880 890 900
pF1KB3 KDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDM
850 860 870 880 890 900
910 920 930 940 950 960
pF1KB3 KKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFPS
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KB3 WLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 WLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQDV
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KB3 VALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 VALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAIK
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KB3 ASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRKG
1090 1100 1110 1120 1130 1140
pF1KB3 KGKSSKK
:::::::
NP_002 KGKSSKK
>>NP_001191676 (OMIM: 102579) replication factor C subun (1148 aa)
initn: 3975 init1: 3975 opt: 7372 Z-score: 5049.4 bits: 946.2 E(85289): 0
Smith-Waterman score: 7372; 99.9% identity (99.9% similar) in 1148 aa overlap (1-1147:1-1148)
10 20 30 40 50 60
pF1KB3 MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIKVNSSRKEDDFKQKQPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIKVNSSRKEDDFKQKQPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGKISRQDPVTYISETDEEDDFMCKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGKISRQDPVTYISETDEEDDFMCKK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 AASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 MVASKRKELSQNTDESGLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVASKRKELSQNTDESGLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 ARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQHS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 KSSADKIGEVSSPKASSKLAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSSADKIGEVSSPKASSKLAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 TMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSRPTSKRDSLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSRPTSKRDSLAK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KB3 TIKKETDVFWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TIKKETDVFWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIG
550 560 570 580 590 600
610 620 630 640 650
pF1KB3 QQGDQSCANKLLRWLRNWQKSSSEDKKHA-KFGKFSGKDDGSSFKAALLSGPPGVGKTTT
::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::
NP_001 QQGDQSCANKLLRWLRNWQKSSSEDKKHAAKFGKFSGKDDGSSFKAALLSGPPGVGKTTT
610 620 630 640 650 660
660 670 680 690 700 710
pF1KB3 ASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMD
670 680 690 700 710 720
720 730 740 750 760 770
pF1KB3 EVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
730 740 750 760 770 780
780 790 800 810 820 830
pF1KB3 KGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRA
790 800 810 820 830 840
840 850 860 870 880 890
pF1KB3 KKDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGD
850 860 870 880 890 900
900 910 920 930 940 950
pF1KB3 MKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFP
910 920 930 940 950 960
960 970 980 990 1000 1010
pF1KB3 SWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQD
970 980 990 1000 1010 1020
1020 1030 1040 1050 1060 1070
pF1KB3 VVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAI
1030 1040 1050 1060 1070 1080
1080 1090 1100 1110 1120 1130
pF1KB3 KASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRK
1090 1100 1110 1120 1130 1140
1140
pF1KB3 GKGKSSKK
::::::::
NP_001 GKGKSSKK
>>XP_016864017 (OMIM: 102579) PREDICTED: replication fac (1121 aa)
initn: 5868 init1: 5868 opt: 5919 Z-score: 4056.8 bits: 762.5 E(85289): 0
Smith-Waterman score: 7156; 97.7% identity (97.7% similar) in 1147 aa overlap (1-1147:1-1121)
10 20 30 40 50 60
pF1KB3 MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIKVNSSRKEDDFKQKQPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIKVNSSRKEDDFKQKQPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGKISRQDPVTYISETDEEDDFMCKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGKISRQDPVTYISETDEEDDFMCKK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 AASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 MVASKRKELSQNTDESGLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
::::::::::::::::::::::::::::::::::
XP_016 MVASKRKELSQNTDESGLNDEAIAKQLQLDEDAE--------------------------
190 200 210
250 260 270 280 290 300
pF1KB3 ARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQHS
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB3 KSSADKIGEVSSPKASSKLAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KSSADKIGEVSSPKASSKLAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSS
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB3 PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB3 IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB3 TMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSRPTSKRDSLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSRPTSKRDSLAK
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB3 TIKKETDVFWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TIKKETDVFWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIG
520 530 540 550 560 570
610 620 630 640 650 660
pF1KB3 QQGDQSCANKLLRWLRNWQKSSSEDKKHAKFGKFSGKDDGSSFKAALLSGPPGVGKTTTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQGDQSCANKLLRWLRNWQKSSSEDKKHAKFGKFSGKDDGSSFKAALLSGPPGVGKTTTA
580 590 600 610 620 630
670 680 690 700 710 720
pF1KB3 SLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDE
640 650 660 670 680 690
730 740 750 760 770 780
pF1KB3 VDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIK
700 710 720 730 740 750
790 800 810 820 830 840
pF1KB3 GAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAK
760 770 780 790 800 810
850 860 870 880 890 900
pF1KB3 KDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDM
820 830 840 850 860 870
910 920 930 940 950 960
pF1KB3 KKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFPS
880 890 900 910 920 930
970 980 990 1000 1010 1020
pF1KB3 WLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQDV
940 950 960 970 980 990
1030 1040 1050 1060 1070 1080
pF1KB3 VALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAIK
1000 1010 1020 1030 1040 1050
1090 1100 1110 1120 1130 1140
pF1KB3 ASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRKG
1060 1070 1080 1090 1100 1110
pF1KB3 KGKSSKK
:::::::
XP_016 KGKSSKK
1120
>>XP_011512032 (OMIM: 102579) PREDICTED: replication fac (1122 aa)
initn: 4844 init1: 3430 opt: 5896 Z-score: 4041.1 bits: 759.6 E(85289): 2.4e-218
Smith-Waterman score: 7144; 97.6% identity (97.6% similar) in 1148 aa overlap (1-1147:1-1122)
10 20 30 40 50 60
pF1KB3 MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIKVNSSRKEDDFKQKQPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIKVNSSRKEDDFKQKQPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGKISRQDPVTYISETDEEDDFMCKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGKISRQDPVTYISETDEEDDFMCKK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 AASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 MVASKRKELSQNTDESGLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
::::::::::::::::::::::::::::::::::
XP_011 MVASKRKELSQNTDESGLNDEAIAKQLQLDEDAE--------------------------
190 200 210
250 260 270 280 290 300
pF1KB3 ARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQHS
220 230 240 250 260 270
310 320 330 340 350 360
pF1KB3 KSSADKIGEVSSPKASSKLAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSSADKIGEVSSPKASSKLAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSS
280 290 300 310 320 330
370 380 390 400 410 420
pF1KB3 PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
340 350 360 370 380 390
430 440 450 460 470 480
pF1KB3 IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
400 410 420 430 440 450
490 500 510 520 530 540
pF1KB3 TMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSRPTSKRDSLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSRPTSKRDSLAK
460 470 480 490 500 510
550 560 570 580 590 600
pF1KB3 TIKKETDVFWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TIKKETDVFWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIG
520 530 540 550 560 570
610 620 630 640 650
pF1KB3 QQGDQSCANKLLRWLRNWQKSSSEDKKHA-KFGKFSGKDDGSSFKAALLSGPPGVGKTTT
::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::
XP_011 QQGDQSCANKLLRWLRNWQKSSSEDKKHAAKFGKFSGKDDGSSFKAALLSGPPGVGKTTT
580 590 600 610 620 630
660 670 680 690 700 710
pF1KB3 ASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMD
640 650 660 670 680 690
720 730 740 750 760 770
pF1KB3 EVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
700 710 720 730 740 750
780 790 800 810 820 830
pF1KB3 KGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRA
760 770 780 790 800 810
840 850 860 870 880 890
pF1KB3 KKDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGD
820 830 840 850 860 870
900 910 920 930 940 950
pF1KB3 MKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFP
880 890 900 910 920 930
960 970 980 990 1000 1010
pF1KB3 SWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQD
940 950 960 970 980 990
1020 1030 1040 1050 1060 1070
pF1KB3 VVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAI
1000 1010 1020 1030 1040 1050
1080 1090 1100 1110 1120 1130
pF1KB3 KASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRK
1060 1070 1080 1090 1100 1110
1140
pF1KB3 GKGKSSKK
::::::::
XP_011 GKGKSSKK
1120
>>XP_011512033 (OMIM: 102579) PREDICTED: replication fac (978 aa)
initn: 3179 init1: 3179 opt: 3274 Z-score: 2250.6 bits: 428.1 E(85289): 1.3e-118
Smith-Waterman score: 5934; 85.3% identity (85.3% similar) in 1147 aa overlap (1-1147:1-978)
10 20 30 40 50 60
pF1KB3 MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIKVNSSRKEDDFKQKQPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDIRKFFGVIPSGKKLVSETVKKNEKTKSDEETLKAKKGIKEIKVNSSRKEDDFKQKQPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 KKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGKISRQDPVTYISETDEEDDFMCKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGKISRQDPVTYISETDEEDDFMCKK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 AASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB3 MVASKRKELSQNTDESGLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MVASKRKELSQNTDESGLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB3 ARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQHS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB3 KSSADKIGEVSSPKASSKLAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSSADKIGEVSSPKASSKLAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB3 PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLES
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB3 IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB3 TMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSRPTSKRDSLAK
::::::::::::::::
XP_011 TMPGKKSKYEIAVETE--------------------------------------------
490
550 560 570 580 590 600
pF1KB3 TIKKETDVFWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIG
XP_011 ------------------------------------------------------------
610 620 630 640 650 660
pF1KB3 QQGDQSCANKLLRWLRNWQKSSSEDKKHAKFGKFSGKDDGSSFKAALLSGPPGVGKTTTA
XP_011 ------------------------------------------------------------
670 680 690 700 710 720
pF1KB3 SLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 -----ELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDE
500 510 520 530 540 550
730 740 750 760 770 780
pF1KB3 VDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIK
560 570 580 590 600 610
790 800 810 820 830 840
pF1KB3 GAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAK
620 630 640 650 660 670
850 860 870 880 890 900
pF1KB3 KDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDM
680 690 700 710 720 730
910 920 930 940 950 960
pF1KB3 KKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFPS
740 750 760 770 780 790
970 980 990 1000 1010 1020
pF1KB3 WLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQDV
800 810 820 830 840 850
1030 1040 1050 1060 1070 1080
pF1KB3 VALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAIK
860 870 880 890 900 910
1090 1100 1110 1120 1130 1140
pF1KB3 ASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKEPRKG
920 930 940 950 960 970
pF1KB3 KGKSSKK
:::::::
XP_011 KGKSSKK
>>XP_011528502 (OMIM: 105400,162230,616924) PREDICTED: n (924 aa)
initn: 185 init1: 70 opt: 266 Z-score: 195.9 bits: 47.8 E(85289): 0.00036
Smith-Waterman score: 268; 23.3% identity (54.2% similar) in 506 aa overlap (174-644:447-924)
150 160 170 180 190 200
pF1KB3 NEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK-MVASKRKELSQNTDESGLNDEA
:..:.:. ... .. : .: :.: ..:
XP_011 PIPFSLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEK
420 430 440 450 460 470
210 220 230 240 250 260
pF1KB3 IAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKKARKDTEAGETFSSVQANLSKAE
::. . :. :.. : : .: . .: :. :. : ..:. . :
XP_011 EAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKE
480 490 500 510 520 530
270 280 290 300 310 320
pF1KB3 KHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQHSKSSADKIGEVSSP-KASSKLAI
. : : .::. . :. ::.: .: ..:... :... .:..:: ::.: .
XP_011 EAKSPAEVKSPE-----KAKSPEK-AKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKA
540 550 560 570 580 590
330 340 350 360 370 380
pF1KB3 MKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSSPAKKESVSPEDSEKKRTNYQA
.. :.. . .. :.. .. .: :.:.:.:.:: :.:.:. .:: . :. .. .:
XP_011 EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKS-PVKEEAKTPEKA-KSPVKEEA
600 610 620 630 640
390 400 410 420 430 440
pF1KB3 YRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNV
..:. : : : . : . .. ..::.: ... :. . :
XP_011 -------KSPEKAKSPEKAKTLD--------VKSPEAKTPAKEEARSPADKFPEKAKSPV
650 660 670 680 690
450 460 470 480 490
pF1KB3 S-------KKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRTMPGKKSKYEIAV-
. : . : . ... : . . . .:. .. : ::.. : :
XP_011 KEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPA
700 710 720 730 740 750
500 510 520 530
pF1KB3 --ETEMKKESKLERTPQKN-----VQGKR----------KISPSKKESESKKSRPTSKRD
.:: ::.:: :..:.:. :. :. :. .:.:.:.::. :: ...
XP_011 TPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKE
760 770 780 790 800 810
540 550 560 570 580
pF1KB3 SLAKTIKKE-------TDVFWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDK
. ::. :: :.: : : . :.: : .. .. : .....: :. ..
XP_011 APAKVEVKEDAKPKEKTEVAKKEPD--DAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEE
820 830 840 850 860 870
590 600 610 620 630 640
pF1KB3 YKPTSLKTIIGQQGDQSCANKLLR-WLRNWQKSSSEDKKHAKFGKFSGKDDGSSFKAALL
: : ... :.. ... . .. .:::: :.: .: . . .: ... :
XP_011 KPKTEAK---AKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKGK
880 890 900 910 920
650 660 670 680 690 700
pF1KB3 SGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAAS
>>NP_066554 (OMIM: 105400,162230,616924) neurofilament h (1020 aa)
initn: 181 init1: 70 opt: 240 Z-score: 177.5 bits: 44.6 E(85289): 0.0038
Smith-Waterman score: 297; 23.7% identity (54.0% similar) in 607 aa overlap (84-644:439-1020)
60 70 80 90 100
pF1KB3 FKQKQPSKKKRIIYDSDSESEETLQVKNAKKPPEKLPVSSKPGK----ISRQDPVTYISE
: ::. : : : . .: : ..:
NP_066 EECRIGFGPIPFSLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTE
410 420 430 440 450 460
110 120 130 140 150 160
pF1KB3 -TDEEDDFMCKKAASKSKENGRSTNSHLGTSNMKK--NEENTKTKNKPLSPIKLTPTSVL
. ::.. :. .: .:.:. ... : . :. :: .. ... ::.: :
NP_066 EVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPA
470 480 490 500 510 520
170 180 190 200 210 220
pF1KB3 DYFGTGSVQRSNKKMVASKRKELSQNTDESGLNDEAIAKQLQLDEDAELERQLHEDEEFA
. . . . .. : : .: : .:. :: . . :.:. ... :. :
NP_066 EAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPE---KEEAKSPAEVKSPEK-A
530 540 550 560 570 580
230 240 250 260 270 280
pF1KB3 RTLAMLDEEPKTKKARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRK
.. : :: :. :. : .. : :. . .. . : : : . :. : :: :.:
NP_066 KSPA--KEEAKSPAEAKSPEKAK--SPVKEEAKSPAEAKSPVK-EEAKSPAEVKS--PEK
590 600 610 620 630
290 300 310 320 330 340
pF1KB3 QSKYESSKESQQHSKSSADKIGEVSSP-KASSKLAIMKRKEESSYKEIEPVASKRKENAI
.: ...:... :... . :..:: ::.: . .. :.. . .. :.. ..
NP_066 -AKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKS
640 650 660 670 680 690
350 360 370 380 390 400
pF1KB3 KLKGETKTPKKTKSSPAKKESVSPEDS-----EKKRTNYQAYRSYLNREGPKALGSKEIP
.: :.:.:.:.:: :.:.:. ::: . :. .: .: .: ...:. . .: :
NP_066 PVKEEAKSPEKAKS-PVKEEAKSPEKAKSPVKEEAKTPEKA-KSPVKEEAKSPEKAKS-P
700 710 720 730 740 750
410 420 430 440 450
pF1KB3 KGAENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVS-------KKTNYLVMGRD
. :.. :. : . .. ..::.: ... :. . :. : . :
NP_066 EKAKT-LD----VKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAK
760 770 780 790 800
460 470 480 490 500 510
pF1KB3 SGQSKSDKAAALGTKIIDEDGLLNLIRTMPGKKSKYEIAV---ETEMKKESKLERTPQKN
. ... : . . . .:. .. : ::.. : : .:: ::.:: :..:.:.
NP_066 APEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKE
810 820 830 840 850 860
520 530 540
pF1KB3 -----VQGKR----------KISPSKKESESKKSRPTSKRDSLAKTIKKE-------TDV
:. :. :. .:.:.:.::. :: .... ::. :: :.:
NP_066 APKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEV
870 880 890 900 910 920
550 560 570 580 590 600
pF1KB3 FWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLKTIIGQQGDQSCA
: : . :.: : .. .. : .....: :. .. : : ... :.. .
NP_066 AKKEPD--DAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAK---AKEDDKTLS
930 940 950 960 970 980
610 620 630 640 650 660
pF1KB3 NKLLR-WLRNWQKSSSEDKKHAKFGKFSGKDDGSSFKAALLSGPPGVGKTTTASLVCQEL
.. . .. .:::: :.: .: . . .: ... :
NP_066 KEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAKGK
990 1000 1010 1020
670 680 690 700 710 720
pF1KB3 GYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDEVDGMAGN
1147 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 12:14:07 2016 done: Thu Nov 3 12:14:09 2016
Total Scan time: 14.870 Total Display time: 0.260
Function used was FASTA [36.3.4 Apr, 2011]